 Sir Alister Hardy Foundation for Ocean Science History of the Continuous Plankton Recorder Database D. Stevens and P.C. Reid.

Slides:



Advertisements
Similar presentations
HES Data Management Ari Haukijärvi. Planning of HES Data Management Purpose of the data management The data will be available for analysis The available.
Advertisements

Basic Computer Vocabulary
Continuous Plankton Recorder Database: current uses and future directions Darren Stevens & Anthony J. Richardson Sir Alister Hardy Foundation for Ocean.
Adaptation to Change Donal T. Manahan Professor of Biological Sciences University of Southern California.
Biodiversity databases and database management systems for the world’s ocean: experience and outputs from five international projects Sergey Piontkovski.
Chapter 1 - An Introduction to Computers and Problem Solving
Essential Introduction to Computers. What is a Computer? An electronic device, operating under the control of instructions stored in its own memory, that.
MARINE HYDPOPHISICAL INSTITUTE DEPARTMENT OF MARINE INFORMATION SYSTEMS & TECHNOLOGIES.
Office 2003 Introductory Concepts and Techniques M i c r o s o f t CPTG104 Intro to Information Systems Dr. Hwang Essential Introduction to Computers.
The Design Of A Web Document Snapshots Delivery System David Chao College of Business San Francisco State University.
Computer Parts There are many parts that work together to make a computer work.
1 Introduction to Web Development. Web Basics The Web consists of computers on the Internet connected to each other in a specific way Used in all levels.
TC2-Computer Literacy Mr. Sencer February 8, 2010.
IWC Database Overview of technology and application 13 th July 2010.
Microsoft Office 2010 Introduction to Computers and How to Purchase Computers and Mobile Devices.
Introduction to Computers
Introduction to Computers
Why is 454 important? Concept of the Rare Biosphere: Minor population members may serve as key-stone species Rare Biosphere may be source of genomic innovation.
Databases in Context Wendy Moncur Department of Computing Science, University of Aberdeen.
Introduction To Computer System
Information System and Management
What Is a Computer? How is a computer defined?
Computer Parts There are many parts that work together to make a computer work.
T r a n s p a r e n t f a s t r e l i a b l e
Microsoft Office 2007 Essential Introduction to Computers.
Week 1 Review of Computer Concepts. Objectives Recognize the importance of computer literacy Define the term, computer Identify the components of a computer.
IT Introduction to Information Technology CHAPTER 01.
Image Workflow Processes Elspeth Haston, Robert Cubey, Martin Pullan & David J Harris.
From Ocean Sciences at the Bedford Institute of Oceanography Temperature – Salinity for the Northwest.
WP 3: Present-day observations of ocean chemistry and biogeography 1.in-situ carbonate chemistry data 2.in-situ calcifier and other biological data 3.synthesis.
COLLECTING Software. Why use Software with Hardware? Software used for collecting includes the software that interfaces with hardware collection device.
Learning Objective The students should be able to: a. state the definition of software b. state the usage of software c. list different types of software.
User Interface Theory & Design Lecture 6a 1.  User interface is everything the end user comes into contact with while using the system  To the user,
Operating Systems David Goldschmidt, Ph.D. Computer Science The College of Saint Rose CIS 432.
Sea Ice Mapping Systems Archive Browser Interface Distribution IngestProduction Ice Analyst Application Database Henrik Steen AndersonDMI Paul SeymourNIC.
Storage Devices A storage device is used to store instructions, data, and information when they are not being used in memory – Magnetic disks use magnetic.
Chapter 1 Computer Hardware1 Computer Hardware A level Computing Book (Reference) By P.M.Heathcore.
1 Title: Introduction to Computer Instructor: I LTAF M EHDI.
North Sea Observatory Tony Walne, Abigail McQuatters-Gollop SAHFOS, Plymouth SAHFOS currently: tows CPRs about 2000 miles/month in North Sea analyses about.
BTEC ICT Level 3 Unit 8 E-Commerce. Session 1 – Technologies Required For an E- Commerce System.
Introduction to Computers in General By: Dr. Emelda Ntinglet-Davis Oracle DBA Class.
Producers and Consumers. Activity 6: Producers and Consumers LIMITED LICENSE TO MODIFY. These PowerPoint® slides may be modified only by teachers currently.
Unit 2- Computer Hardware.  Identify system components  Describe the role of the central processing unit  Define computer memory  Identify types of.
Discovering Computers 2008 Fundamentals Fourth Edition Discovering Computers 2008 Fundamentals Fourth Edition Chapter 1 Introduction to Computers.
Chapter 1 WHAT IS A COMPUTER Faculty of ICT & Business Management Tel : BCOMP0101 Introduction to Information Technology.
Lifting the Lid: How Computers Work. CPU  The Central Processing Unit  Sometimes called the microprocessor  Carries millions of electrical signals.
Computers Mrs. Flowers University High School.
Virtual Track Surveying Paul Furniss. An introduction to Omnicom Engineering A few words from Gary Sanford the UK Sponsor What is the OmniSurveyor3D System?
Physical Security at Data Center: A survey. Objective of the Survey  1. To identify the current physical security in data centre.  2.To analyse the.
1.4 wired and wireless networks lesson 1
Identify internal hardware devices (e. g
Computer and Internet Basics
Chapter 12 Accessing Databases
What’s out there and who’s using it
CHAPTER 1: Computers and Systems
Computer Science II Chapter 1.
Nature & Types of Software
Transaction processing systems
Computer Science 2 What’s this course all about?
Objectives Overview Explain why computer literacy is vital to success in today’s world Define the term, computer, and describe the relationship between.
The abacus has roots dating back over 5,000 years
Project 1 Introduction to HTML.
Computers Are Your Future
Information System and Management
Database Management System (DBMS)
Chapter 1 – Introduction to Computers
Introduction to computers
Operating Systems: History
Introduction to Computing
Presentation transcript:

 Sir Alister Hardy Foundation for Ocean Science History of the Continuous Plankton Recorder Database D. Stevens and P.C. Reid

 Sir Alister Hardy Foundation for Ocean Science Introduction Continuous Plankton Recorder Survey The development of the CPR database Recent and future development

 Sir Alister Hardy Foundation for Ocean Science The CPR Survey Monitor the near-surface plankton of the North Atlantic and North Sea on a monthly basis Year to year changes in abundance Seasonal cycles of species Geographical distributions Effects of fisheries and climate change

 Sir Alister Hardy Foundation for Ocean Science CPR routes map

 Sir Alister Hardy Foundation for Ocean Science How data are collected The CPR is a plankton sampling instrument designed to be towed from merchant ships on their normal sailings Alister Hardy used the first prototype to sample krill in the Antarctic on the Discovery cruises of

 Sir Alister Hardy Foundation for Ocean Science The CPR

 Sir Alister Hardy Foundation for Ocean Science How data are analysed Phytoplankton x450 magnification ~1/8000 of sample Zooplankton traverse (<2mm) x48 magnification ~1/40th of sample Zooplankton eye count (>2mm) removed and counted

 Sir Alister Hardy Foundation for Ocean Science How data are STORED Before computers The first computerised database Geographical effects Updated computer languages Current system

 Sir Alister Hardy Foundation for Ocean Science Before Computers All calculations had to be carried out by hand Sample positions Cutting points Local time Before

 Sir Alister Hardy Foundation for Ocean Science Before Computers (2) Data were stored on paper for each tow This data would then be transposed onto cards for each species Sample No Species name Tow record Sample No Tow name Species card Before 1969

 Sir Alister Hardy Foundation for Ocean Science Before Computers (3) This task was very time consuming. The analysis team of more than 12 spent 1/3rd of their time entering data. Process was in need of speeding up Before 1969

 Sir Alister Hardy Foundation for Ocean Science The first computerised database Based at Edinburgh Regional Computing Centre (ERCC) Prior to this Principle Component Analysis had been carried out using a DEUCE electronic computer Data processed using a KDF 9 (32Kb)

 Sir Alister Hardy Foundation for Ocean Science Card Reader Operator's ConsoleTape Drives Pictures from photogallery/pages/ htm KDF 9

 Sir Alister Hardy Foundation for Ocean Science The first computerised database Based at Edinburgh Regional Computing Centre (ERCC) Prior to this Principle Component Analysis had been carried out using a DEUCE electronic computer Data processed using a KDF 9 (32Kb) ALGOrithmic Language (ALGOL)

 Sir Alister Hardy Foundation for Ocean Science External Changes ALGOL no longer supported by the ERCC Programs transfer to IMP and Fortran (IV)G

 Sir Alister Hardy Foundation for Ocean Science Relocation Move to Plymouth, UK PDP 11 (16-bit) Programs rewritten into BASIC Image from:

 Sir Alister Hardy Foundation for Ocean Science PDP11 Source:

 Sir Alister Hardy Foundation for Ocean Science Hardware changes CPR database was moved to a GEC 41/

 Sir Alister Hardy Foundation for Ocean Science

 Sir Alister Hardy Foundation for Ocean Science Disc Drive (70Mb) Tape Reader

 Sir Alister Hardy Foundation for Ocean Science Further Changes Out with the old...

 Sir Alister Hardy Foundation for Ocean Science IBM 93/70..in with the new

 Sir Alister Hardy Foundation for Ocean Science Rapid Changes The database moved home again to RS 6000 –This home was short lived due to problems networking the RS 6000 Now all data processing was programmed in Fortran

 Sir Alister Hardy Foundation for Ocean Science Development using Fortran The database was stored on a Solaris 2.4 Processing was carried out using an IBM PC

 Sir Alister Hardy Foundation for Ocean Science ORACLE First relational database contain CPR data Due to cost of maintaining ORACLE system was dropped

 Sir Alister Hardy Foundation for Ocean Science ACCESS - Current system Relational database developed in ACCESS User friendly interface

 Sir Alister Hardy Foundation for Ocean Science ACCESS - Current system

 Sir Alister Hardy Foundation for Ocean Science

 Sir Alister Hardy Foundation for Ocean Science Further development Sample processing transferred to Microsoft Access

 Sir Alister Hardy Foundation for Ocean Science Consistency Strategy to ensure all systems are stored on current media. –Some programs can be lost because the media on which that have been stored has become obsolete Ensure same algorithms are applied to data

 Sir Alister Hardy Foundation for Ocean Science Quality Control Computers are not always a good thing. Basic QC programme used to check data and advice given. Analysis sheets are checked by experienced analysts

 Sir Alister Hardy Foundation for Ocean Science Data Policy SAHFOS operates an open access data policy Data requests made to the Data Manager. Policy statement available on the web site –

 Sir Alister Hardy Foundation for Ocean Science CPR Plankton Atlas

 Sir Alister Hardy Foundation for Ocean Science DATA AVAILABLE The CPR database contains information for – samples ( ) 4.7 million miles towed – positive plankton entries plankton entries CPR bibliography contains –775 references. –

 Sir Alister Hardy Foundation for Ocean Science Web Development

 Sir Alister Hardy Foundation for Ocean Science Future development Web based development –increase ease of access to the database Expansion to include further environmental variables. Plankton Atlas available on CD or the Web CPR Browser available on CD Future

 Sir Alister Hardy Foundation for Ocean Science History of the Continuous Plankton Recorder Database D. Stevens and P.C. Reid