“Compliance” for Analysis Data Chris Decker, Vice-President, Life Sciences Practice, d-Wise Technologies Randall Austin, Manager, Data Standards, GlaxoSmithKline.

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Presentation transcript:

“Compliance” for Analysis Data Chris Decker, Vice-President, Life Sciences Practice, d-Wise Technologies Randall Austin, Manager, Data Standards, GlaxoSmithKline

© 2010 Overview Compliance within Clinical Research What is ADaM Compliance? ADaM Team Process for Defining Validation Document 1.0

© 2010 Compliance? Validation? com·pli·ance noun \kəm- ˈ plī-ən(t)s\ the act or process of complying to a desire, demand, proposal, or regimen or to coercioncomplying val·i·da·tion noun \ ˌ va-lə- ˈ dā-shən\ the act of demonstrating that a procedure, process, and activity will consistently lead to the expected results

© 2010 Different Definitions of Compliance Software: the process around the development of technical bits Process: process around the flow of information; much more imprecise Data: Both the structure and the content of the data 4

CDISC Compliance ODM - specification SDTM – standard Interpreting a doc Subjective Inconsistent rules get defined 5 Some compliance is easy and some is not

© 2010 What is ADaM Compliance? Perfect Structure + Bad Metadata = Bad ADaM Good Metadata + Bad Structure = Bad ADaM Good ADaM must include: 6 Perfect structure: Naming Conventions Labels/Types Terminology Good metadata: Clear definition of algorithms Traceability to SDTM But, not every ADaM submission should or will be identical

© 2010 What is ADaM Compliance? Subjective –“Analysis datasets and their associated metadata should facilitate clear and unambiguous communication.” –What is clear to everyone? Objective –“ADSL contains one record per subject, regardless of the type of clinical trial design.” –Very black and white statement 7

© 2010 Defining the Rules: The Process Why the ADaM team? –One gold standard –Reduce confusion When to define the rules? –During the IG review? Nope –Waited for a finalized document Sub-team with a short term goal 8

© 2010 Extraction Pulling the rules out of a PDF file –Each team member tackled a section –Anything remotely resembling a rule was listed Initially had over 350 rules…ouch Collated in a spreadsheet for tracking Quickly realized we had some challenges 9

© 2010 To Test or Not To Test? That is the question… Some rules could be clearly tested –All ADaM variable labels must be no more than 40 characters in length And some could be not be implemented with a machine (subjective) –Analysis datasets and their associated metadata should facilitate clear and unambiguous communication Some rules sounded logical but didn’t exist 10

© 2010 Rule Clarity Make sure that ADaM rules are clear & unambiguous Requirements: –Text based (no pseudo code) –Simple and clear Example: Instead of: *FN and *FL must be a one-to-one mapping The team defined the following: –There is more than one value of a variable with a suffix of FN for a given value of a variable with the same root name and a suffix of FL –There is more than one value of a variable with a suffix of FL for a given value of a variable with the same root name and a suffix of FN –A variable with a suffix of FL is equal to Y and a variable with the same root and a suffix of FN is not equal to 1 –And a few more… Note: All checks were written in the ‘negative’ 11

ADaM in a Box ADaM just a piece of the standards How to define cross model rules Examples: SDTM: Clear and easy –identical metadata across variables with the same name Define: Did not include –An ADaM variable described in define.xml must be included in the dataset 12

© 2010 Metadata about the Rules Always need metadata Team decided to describe the rules Structure Group: ADSL, BDS, ADSL to BDS Functional Group: –Metadata only –Value consistency –Presence/Population of variable ADaM Variable Group: Based on IG sections –Study Identifiers and Timing Variables Note: NO Severity ranking – they are all errors 13

© 2010 Example of the Validation Rules 14

© 2010 Summary ADaM Validation document timeline –Initiated February, 2010 –Draft for public comment, July, 2010 –Final version released September, 2010 Extracting checks from a document is challenging Able to define 180 checks for ADaM Compliance is both the objective and subjective parts 15

Acknowledgements Randall Austin Sandy Chang Chris Decker Nate Freimark Monika Kawohl Geoff Mann Kim Minkalis Terek Peterson Jack Shostak Dave Smith 16

© Strength through collaboration.