Radhika Burra, Gonzalo A. Pradenas, Claudio C. Vásquez and Thomas G. Chasteen.

Slides:



Advertisements
Similar presentations
Lecture 8b Gas Chromatography.
Advertisements

Gas Chromatography, GC L.O.:  Explain the term: retention time.  Interpret gas chromatograms in terms of retention times and the approximate proportions.
Identification of organoselenium and organotellurium compounds in the headspace of genetically-modified organisms using GC/SCD James D. Fox, Bala Krishna.
Most Probable Number Statistical Procedure used to estimate the number of bacteria that will grow in liquid media. Gives a 95% probability that the bacterial.
Bioremediation of selenium-contaminated environmental samples S. Hapuarachchi and T. G. Chasteen Department of Chemistry Sam Houston State University.
Gayan K. A. Appuhamillage and T. G. Chasteen Department of Chemistry Sam Houston State University 1 Bioremediation of toxic oxyanions using genetically.
D etermination of E lemental S elenium P roduction by a F acultative A naerobe G rown U nder S equential A naerobic/ A erobic C onditions Suminda Hapuarachchi,
Analysis of Residues. Laboratory Analysis of Debris and Other Samples 1. Preparation of Liquid Samples: Liquid samples are simply drawn into a special.
Gas Chromatography in the detection of Volatile Organic Compounds.
Toxicity of selenocyanate on the metalloid-resistant bacterium LHVE Rebecca A. Montes & Thomas G. Chasteen.
1 Lecture 7 Ch 6: Distillation & Boiling Points This Week In Lab: Ch 5: Extraction, Procedure 2 Ch 4 Final Report Due Next Week in Lab: Ch 6 PreLab due.
Lecture 8. GC/MS.
Chem. 31 – 4/8 Lecture. Announcements I Exam 2 – Monday –Covering Ch. 6 (topics since exam 1), 7, 8-1, 17, and parts of 22 (up to and including retention.
General Microbiology (Micr300) Lecture 4 Nutrition and Growth (Text Chapters: ; 6.1; ; )
1 Chapter 24 GC Gas Chromatography. 2 GC Mechanism of separation is primarily volatility. Difference in boiling point, vapor pressure etc. What controls.
Methods Monitoring Polar Compounds Using Membrane Extraction and High-Speed Gas Chromatography Authors: Jonathan Maurer, Dr. Anthony J. Borgerding* Department.
Key Area 6 : Growth in Micro-organisms
Detecting Mutagens and Carcinogens. introduction - Increased number of chemicals used and present as environmental contaminats, testes for the mutagenicity.
Instant Notes Analytical Chemistry
Identification of Mixed Organic Sulfur-Selenium and Sulfur-Tellurium Compounds in the Headspace Gases Above Genetically Modified Escherichia coli Jerry.
Types of Chromatography Liquid chromatography versus gas chromatography? Applications? Volatile  GC Non-volatile  LC.
F215 control, genomes and environment
Principles of Chromatography. Chromatography is the most powerful tool for separating & measuring the components of a complex mixture. Quantitative &
LECTURE 4: CHROMATOGRAPHY Content: - Chromatographic separation - classifying analytical separations; column chromatography, planar chromatography - gas.
By, Blessy Babu. What is Gas Chromatography?  Gas spectroscopy is a technique used to separate volatile components in a mixture.  It is particularly.
New York City Department of Environmental Protection Bureau of Water Supply Water Quality Bio-Stability of New York City’s Distribution Water Authors:
Chapter 6 - Chromatography
Gas Chromatography Carrier Gas Flow Control Injector Port Column Column Oven Detector Recorder The GC system consists of gas supplies for the mobile phase.
University of Pretoria
ANALYTICAL CHEMISTRY CHEM 3811 CHAPTER 22 DR. AUGUSTINE OFORI AGYEMAN Assistant professor of chemistry Department of natural sciences Clayton state university.
Chromatography Chapter 6.
Elements, Compounds, & Mixtures
Biotechnology – Biotechnological techniques 1.Use of micro-organisms 2.Industrial production of enzymes 3.Tissue cultures.
1 Capillary Electrophoretic Determination of Selenium and Tellurium Oxyanions in Bacterial Cultures by Bala Krishna Pathem and Thomas G. Chasteen Department.
Growing of microorganism
4-2 Sources of DNA.
LAB NO 8 LAB NO 8 Environmental Factors Affecting Microbial growth.
Physical and Chemical Control of Microorganisms. Control of Microorganisms by Physical and Chemical Agents.
Bacterial Growth Curve
Development of a headspace solid-phase microextraction method coupled to gas chromatography (HS-SPME GC-MS) to capture and analyze the volatile organic.
Working with yeast Microbiologists have developed techniques for isolating and maintaining strains in the laboratory Strains: microorganisms of the same.
Application of solid-phase microextraction to the recovery of explosives and ignitable liquid residues from forensic specimens K.G. Furton, J.R. Almirall,
FACTORS INFLUENCING THE SYNTHESIS OF POLYHYDROXYBUTYRATE DEPOLYMERASE IN STREPTOMYCES SP. 5A Matthew B. Persinger, Matthew Shull, and Stephen F. Baron,
Chemistry 1- Separation Objectives: 1) Learn about 2 different separation methods.
By: Arafath and Nick. What is it  Chromatography is a technique that is used to separate the substances present in a mixture.  It is widely used to.
By- Bhavya, Harsh, Harshvardhan, Namrata, Ronit and Vidhatri
Introduction to Chromatography. Introduction Chromatography permit the scientist to separate closely related components of complex mixtures. In all chromatographic.
Dr Saleha Shamsudin. 1.INTRODUCTION Topics to be covered: 1.1 INTRODUCTION TO METHODS IN ANALYTICAL CHEMISTRY 1.2 STEPS IN QUANTITATIVE ANALYSIS.
Ch 21 – Principles of Chromatography and Mass Spectrometry Ch 22 – Gas and Liquid Chromatography.
Chromatography and Instrumentation. Chromatography Separate Analyze Identify Purify Quantify Components Mixture Chromatography is used by scientists to:
1 Classification and purification of Organic Compounds.
Presented by – ANAMIKA BANERJEE (RESEARCH SCHOLAR)
Presented by Deepthi Ravipati. Barbiturates are derivatives of barbituric acid. They act as central nervous depressants. These drugs are frequently used.
CHROMATOGRAPHY Chromatography is used to separate and analyse small amounts of mixtures Methods involve a stationary phase and a mobile phase. There are.
Lab Tools of Forensic Scientists. Detection Presumptive tests ◦ Give idea as to what probably is in a sample/what definitely is not in a sample  Ex:
Growth of Bacterial Culture
1 Principles of Chromatography Chap Analytical Separations and Chemical Problem Solving If you, a researcher of a food company are asked to find.
Influences of environmental factors on the instant removal of Geosmin and 2-MIB by powdered activated carbon Viet Ly Quang a · Sung Kyu Maeng b · Ilhwan.
Gas Chromatography Chap 27 Types: Gas-solid chromatography (GSC)
Bacterial Cultures *Bacteria grow best in warm, moist, dark areas that contain a lot of food. -When we culture bacteria, we provide them with this environment.
Objectives Use appropriate microbiology media, test systems, and lab equipment. Describe the general properties and characteristics of bacteria – By doing.
UV/VIS SPECTROSCOPY.
SEPARATION METHODS OF ANALYSIS (CHM 703)
Chem. 133 – 5/11 Lecture.
William Trebelcock & James Erdmann
A guide for A level students KNOCKHARDY PUBLISHING
High-Performance Liquid Chromatography
GAS CHROMATOGRAPHY.
Chromatography Forensic Science.
High-Performance Liquid Chromatography
Presentation transcript:

Radhika Burra, Gonzalo A. Pradenas, Claudio C. Vásquez and Thomas G. Chasteen

Selenium  identified as an element in 1917, named from the Greek word, ‘selene’  exists in different forms: metallic, water soluble and gaseous.  considered as an essential trace nutrient  used in the treatment of serious deficiency diseases  used as an anti-oxidant, in glass manufacturing industry, semi- conductor materials and in electronic applications

Tellurium  discovered in 1782, named after Latin word ‘tellus’  extremely rare element  chemically related to selenium and sulfur  mildly toxic, teratogenic  used in semiconductor and electronic industry  used in the treatment of syphilis and leprosy

 exposure is fatal to living beings.  considered as a severe environmental problem.  environmental problems include, water contamination Kesterson Reservoir of California Power River Basin, Wyoming soil contamination selenium contamination affecting plants and animals Why we are concerned???

 Environmental clean-up method includes: Biological treatment-bioprocessing. Filtration after pH adjustment Evaporation and soil removal Bioprocessing: also called bioremediation/bioreduction: use of microorganisms or their enzymes for detoxification. different microbial pathways for the metabolism of toxic compounds. detoxify soluble toxic ions to insoluble and other less toxic forms. What is Bioprocessing???? } Chemical detoxification methods

Bacteria currently being used  LHVE - species of interest.  characteristics include: gram positive, rod shaped bacteria forms spores. gelatinase activity.  classified as a Bacillus spp.  isolated from Huerquehue National park, Chile.  selenium (Se) resistant.  reduce Se in solution to elemental Se.  can be seen as a blood-red precipitate.

Chemical species of interest  Anions of selenium: selenite (SeO 3 2- ) selenate (SeO 4 2- ) selenocyanate (SeCN - )  Oxyanions of tellurium: tellurite (TeO 3 2- ) tellurate (TeO 4 2- )

 Gas chromatography with fluorine induced sulfur chemiluminescence detector (GC-SCD) analyze and separate volatile compounds specific for Se, Te, and Sb compounds detection limits are in picogram range  Gas chromatography- mass spectrometry (GC-MS) identification of structure of the unknown compounds Instrumentation

Sample preparation  Luria-Bertani (LB) medium: tryptone, sodium chloride, yeast extract, water.  pH adjusted to 7.  autoclave at C.  preparation of preculture.  incubation at 37 0 C for approximately 24 hrs.  growth curve and headspace samples preparation.  amendment with different metalloid concentrations.

Growth curve analysis  performed using liquid culture absorbance at 526 nm  readings are taken at regular intervals of time  log phases of growth are estimated as the linear portion of the log of absorbance versus time plot  the specific growth rate gave a clear idea about the relative toxicity of each of the amended metalloid  lower specific growth rates suggest higher toxicity

Lag phase ( where the bacteria gets used to the new environment) Log phase (growth phase of bacteria) Stationary phase (no growth) Death phase Bioreactor%20Page.htm

Growth Curve Results Figure 1: Growth Curve for LHVE with 5 mM metalloid amendment.

Figure 2: Growth Curve for LHVE with 10 mM metalloid amendment.

Zone of Inhibition  second method of estimating the relative toxicity  it is the clear region around the paper disc saturated with metalloid solution on the agar surface  this is an indication of the absence, or the effective inhibition, of microbial growth by the metalloid  zone of inhibition of 52 mm was observed for tellurite amended plate  tellurite was proved to be more highly toxic than all selenium anions  these set of experiments further confirmed the growth curve results

control tellurite selenite selenate selenocyanate Zone of Inhibition of LHVE at 25 mM tellurite & 100 mM selenium anions

 part of the bioreduction process involves methylating Se  the headspace of the bacteria is sampled using solid-phase microextraction fiber (SPME)  fiber thickness is 75 µm (larger the surface area, the greater the adsorption)  fiber exposure time is about minutes.  splitless injection of sample in C injector.  temperature Program: 30 0 C for 2 minutes, ramped 15 0 /min and held at C for 5 minutes. Headspace Analysis

What do you mean by headspace? G = the gas phase (headspace) The gas phase referred to as the headspace and lies above the condensed sample phase S = the sample phase The sample phase contains the compound(s) of interest which are volatile in nature that diffuse into the gas phase until equilibrium is attained Ref:duiblog.arizonaduicenter.com/tags/defense/

Solid Phase MicroExtraction Ref:  rapid, simple, sensitive, solvent-free extraction technique  works on adsorption and desorption principle  concentrate the headspace gases

Headspace Results Figure 3: Chromatogram of LHVE control after 48 h. MeSH- methanethiol DMeDS- dimethyl disulfide DMeTS- dimethyl trisulfide

MeSH- methanethiol, 2.63 DMeSe- dimethyl selenide, 5.58 DMeDS- dimethyl disufide, 8.78 DMeSeS- dimethyl selenenyl sulfide, DMeDSe- dimethyl diselenide, DMeTS- dimethyl trisulfide, DMeSeDS- dimethyl selenenyl disulfide, DMeDSeS- dimethyl diselenenyl disulfide, DMeTSe- dimethyl triselenide, Figure 4: Chromatogram of LHVE amended with 1.0 mM selenite, after 48 h.

Figure 5: Chromatogram of LHVE amended with 1 mM tellurite, after 48 h. MeSH- methanethiol, 2.60 DMeDS- dimethyl disufide, 8.76 DMeTS- dimethyl trisulfide, 12.66

CompoundFormula Boiling Point ( 0 C) Retention Time (min) MethanethiolCH 3 SH62.63 Dimethyl selenideCH 3 SeCH Dimethyl disulfideCH 3 SSCH Dimethyl selenenyl sulfideCH 3 SeSCH Dimethyl diselenideCH 3 SeSeCH Dimethyl trisulfideCH 3 SSSCH Dimethyl selenenyl disulfideCH 3 SeSSCH Dimethyl diselenenyl sulfide CH 3 SeSeSCH 3 217*15.64 Dimethyl triselenideCH 3 SeSeSeCH 3 236*17.34 Table of Retention Times of Headspace compounds in GC-SCD

GC-MS Results Figure 6: Total ion chromatogram of an empty SPME fiber.

Figure 7: Total ion chromatogram of LHVE control after 72 h. From the SPME fiber

Figure 8: Total ion chromatogram of LHVE amended with selenite after 72 h. DMeSeS- dimethyl selenenyl sulfide, 6.3 DMeDSe- dimethyl diselenide, 7.32 DMeSeDS- dimethyl selenenyl disulfide, 9.47 *DMeDSeS- dimethyl diselenenyl disulfide, *DMeTSe- dimethyl triselenide, DMeSeDS, 9.47 * TWO NEW COMPOUNDS

Figure 9: Mass spectrum of dimethyl diselenenyl sulfide at min. m/zFragment 80Se 93CH 3 -Se- 110CH 3 -Se-CH 3 127CH 3 -Se-S- 142CH 3 -Se-S-CH Se-Se- 175CH 3 -Se-Se- 190CH 3 -Se-Se-CH 3 207CH 3 -Se-Se-S- 216CH 3 -Se-Se-S-CH 3 222CH 3 -Se-Se-S-CH 3

Figure 14: Mass spectrum of dimethyl triselenide at min. m/zFragment 80Se 95CH 3 -Se- 160-Se-Se- 175CH 3 -Se-Se- 190CH 3 -Se-Se-CH 3 255CH 3 -Se-Se-Se- 270CH 3 -Se-Se-Se-CH 3

Conclusions  amendments had pronounced effect on the specific growth rate (SGR) of LHVE TeO 3 2- > > SeO 3 2- > SeO 4 2- = SeCN -  zone of inhibition experiments, further confirmed the SGR results  headspace analysis showed a diverse production of organo-sulfur and -selenium containing volatiles, but no organo-tellurium  identification of two new compounds: DMDSeS, DMTSe

Acknowledgements Department of Chemistry, Sam Houston State University Ms. Rachelle Smith, Analytical Laboratory Manager, TRIES Lab Funding from Robert A. Welch Foundation Rekha Raghavendra, for guiding in toxicity experiments Dr. Stacey Edmonson, UWGRE

Thank You …

Questions????