V. Breton, Lyon BBE, September 2002 WP10 Status. V. Breton, Lyon BBE, September 2002 WP10 goals between now and the end of the year Deploy the applications.

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Presentation transcript:

V. Breton, Lyon BBE, September 2002 WP10 Status

V. Breton, Lyon BBE, September 2002 WP10 goals between now and the end of the year Deploy the applications listed in deliverable D10.2 –Test algorithms on a significant scale (several tens of CPU) to get biomedically meaningful results –Demonstrate the relevance of grids to handle biomedical data and metadata Have DataGrid nodes in biomedical laboratories –Need for training of system engineers to install EDG in their lab (T.Silvestre joined TSTG group) Write D10.3 deliverable describing our results on the testbed

V. Breton, Lyon BBE, September 2002 List of applications Bio-informatics –Phylogenetics : BBE Lyon (T. Silvestre) –Search for primers : Centrale Paris (K. Kurata) –Statistical genetics : CNG Evry (N. Margetic) –Update and mirroring of genomics databases : LPC Clermont (Y. Legré) –Bio-informatics web portal : IBCP (C. Blanchet) –Parasitology : LBP Clermont (N. Jacq) –Data-mining on DNA chips (R. Médina) –geometrical protein comparison (C. Ferrari) Medical imaging –MR image simulation: CREATIS (H. Benoit-Cattin) –Medical data and metadata management : CREATIS (J. Montagnat) –Simulation platform for PET/SPECT based on Geant4 : GATE collaboration (L. Maigne)

V. Breton, Lyon BBE, September 2002 HealthGrid GridStart cluster EUROGRID DATAGRID DAMIEN CROSSGRID GRIDSTART Only health related GRID’s Multidisciplinary GRID’s GEMSS HEALTHGRID CLUSTER BIOGRID MAMMOGRID Public Health Patient Tissue, organ Cell Molecule Public health informatics Medical Informatics Medical Imaging Bio-informatics Figure 1 ETC.

V. Breton, Lyon BBE, September 2002 Events –Cluster meeting of the 5 health related grid projects approved in 2002 DataGrid invited to present its experience in deploying biomedical applications on a grid –Crossgrid application Workshop in Linz (September 28-30) –Open meeting on health grids in Brussels –Datagrid booth at IST2002 (December)

V. Breton, Lyon BBE, September 2002 Conclusion Increase of Life Sciences oriented grids in the future... WP10 experience in DATAGRID is interesting for other Biomedical grid projects Need to proove what could be done in biology with the grid technology