Plectonemic joints are joints in which one molecule is topologically wound around the other molecule. Plectonemic associations of DNA molecules.

Slides:



Advertisements
Similar presentations
Meaning of Pi 1 The Meaning & Use of Pi by Joseph A. Castellano, Ph.D.
Advertisements

Genome Organisation I Bacterial chromosome is a large (4 Mb in E coli) circular molecule Bacterial cells may also contain small circular chromosomes called.
Single-molecule analysis of DNA uncoiling by a type II topoisomerase Terence R. Strick, Vincent Croquette & David Bensimon , Katrine Rude Laub.
An ellipse is an oval shape with no regular radius. It is set up along 2 axes. The “X” axis is always the longest one. X X Y Y The “Y” axis is always the.
Pig Dissection Andrew Zegarski Joe Randazzo. Set up dissection table with paper towels, a tray to dissect the pig in, gloves, the fetal pig, and your.
DNA.
DNA topoisomerases in vivo Dr. Sevim Işık. What is Supercoiling? Positively supercoiled DNA is overwound Relaxed DNA has no supercoils 10.4 bp In addition.
MBB 407/511 Lecture 21: Eukaryotic DNA Replication Nov. 29, 2005.
DNA Extraction Lab DNA Source = wheat germ Wheat germ contains many nutrients Wheat bran contains fiber White flour has germ and bran removed, whole wheat.
Pulling the Wool Over Mitosis... or, how you can help students understand the difference between chromosomes and chromatin.
1. This will cover the following: Genomic organization of prokaryotic and eukaryotic cells. Structure of DNA, RNA and polypeptide. Watson and Crick Model.
Nucleic Acids: How Structure Conveys Information
Genes are composed of nucleic acids (usually DNA) Pneumococcus can be transformed from an avirulent to a virulent strain DNA is the transforming principle.
Single Supercoiled DNAs. DNA Supercoiling in vivo In most organisms, DNA is negatively supercoiled (  ~ -0.06) Actively regulated by topoisomerases,
DNA: Structure, Dynamics and Recognition Les Houches 2004 L4: DNA deformation.
DNA Structure/Composition Taryono Faculty of Agriculture Gadjah Mada University.
Structures Packaging – Forms of Loading. Tension A force that pulls on a structure trying to make it longer. Example – hold the hand of another person,
P ROTEIN - INDUCED DNA T OPOLOGY Kathleen McClain Hofstra University Mentor: Wilma Olson Methylase from HAEIII Covalently Bound to DNA PDB ID: 1DCT.
What’s the central dogma of biology?
How to Disassemble and M16 By: Anthony Johnson. Parts List Left and right hand guards Upper and Lower Receiver Charging Handle Bolt Carrier Retaining.
What are the 4 nitrogenous bases? Which bases bond together? REMEMBER.
Properties of Air. Background Weather is affected by the unique properties of air. These properties include: Air has mass and volume Air expands to fill.
Prepare the Pattern and Fabric for Construction Apparel I: Objective 4.02.
Areas of Quadrilaterals, Triangles and Circles
Nucleic Acids The blueprints. Types of Molecules Polymers of nucleotides DNA: code for genetic information RNA –mRNA intermediates in protein synthesis.
Topological Problems in Replication
 Stand by  For the hand signal to “stand by,” the floor manager raises his hand and arm at the beginning of the show or following a spot break  Cue.
The Cell Cycle Test Review. 1. Which of the following is not a reason cells divide? A.Cells divide to reproduce asexually. B.Cells divide so a multicellular.
An ellipse is an oval shape with no regular radius It is set up along 2 axis The “X” axis is always the longest one. X X Y Y The “Y” axis is always the.
nucleic acid structure
Paul D. Adams University of Arkansas Mary K. Campbell Shawn O. Farrell Chapter Nine Nucleic Acids: How Structure.
Small Sewing Equipment. Tape Measure Use: Taking body measurements Care & Precautions: Keep tape wrapped up Don’t stretch.
Fractals in nature.
How to Sew on a Button. Types of Buttons Two Hole Button Four Hole Button Shank Button.
Electromagnetism.
8.4 Improper Integrals. ln 2 0 (-2,2) Until now we have been finding integrals of continuous functions over closed intervals. Sometimes we can find.
Enzymes.
DNA REPLICATION. DNA replication video DNA and Chromosomes In _________cells, DNA is located in the cytoplasm. Most prokaryotes have a __________ DNA.
Sewing Rules and Guidelines
Inequalities R eview- g reater than: greater than or equal to: less than: less than or equal to: ** The inequality sign is always pointing to the smaller.
Nucleic acid structure Prof. Thomas E. Cheatham III.
DNA supercoiling. DNA is a big molecule Ruptured viral particle (bacteriophage) X DNA about 1.7µm © 2010 Paul Billiet ODWSODWS.
How to tie a Shoe Alexis Coleman Period 6 2/11/08 PowerPoint Project 3.
PROPERTIES OF DNA I PRIMARY SEQUENCE A. Base Pairing
UNIT 2 Genetic information Biology and Geology 4. Secondary Education CELL DIVISION IN PROKARYOTIC CELLS.
Nucleic Acids: How Structure Conveys Information Feb 23, 2016 CHEM 281.
Work these in your notebook For the multiple selection questions write down and explanation.
Cell Division and DNA Replication Notes Open the book to pages 132 and 133. You will follow along with the diagram.
Homologous Recombination in Real Time: DNA Strand Exchange by RecA
Braided T-shirt Rug *****.
Date of download: 10/18/2017 Copyright © ASME. All rights reserved.
MATH:7450 (22M:305) Topics in Topology: Scientific and Engineering Applications of Algebraic Topology Nov 8, 2013: DNA Topology Fall 2013 course offered.
Hand Signals for Broadcasting
Mitosis.
Topological Ordering Algorithm: Example
A New Twist on Transcriptional Bursting
Volume 111, Issue 8, Pages (October 2016)
The Limit of a Function.
Homologous Recombination in Real Time: DNA Strand Exchange by RecA
A Rad51 Presynaptic Filament Is Sufficient to Capture Nucleosomal Homology during Recombinational Repair of a DNA Double-Strand Break  Manisha Sinha,
Topological Ordering Algorithm: Example
Topological Selectivity in Xer Site-Specific Recombination
Topological Ordering Algorithm: Example
Drawer Construction Machine methods J.Byrne 2016.
Topological Ordering Algorithm: Example
Computational Analysis of DNA Gyrase Action
Jachen A. Solinger, Konstantin Kiianitsa, Wolf-Dietrich Heyer 
In what follows we present some QCT movies
Presentation transcript:

Plectonemic joints are joints in which one molecule is topologically wound around the other molecule. Plectonemic associations of DNA molecules can not be disrupted by deproteination, whereas paranemic joints can.paranemic joints Paranemic is a topological term for the joint that is made by wrapping one circle around another without cutting either circle. The two circles can always be pulled apart. Paranemic is distinguished from plectonemicplectonemic Paranemic Plectonemic

B-DNA, B-form; A-DNA- shorter and wider; Z- left handed (denoted L); S- form- stretched 70%, sc- supercoiled; P- Pauling DNA, bases out, P-in – inside out DNA