Multiple sequence alignment and alignment editor.

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Multiple sequence alignment and alignment editor

Multiple sequence alignment ClustalW - Alignment of multiple sequences using the ClustalW algorithmClustalW MUSCLE - Multiple PROTEIN sequences comparison by log-expectationMUSCLE T_COFFEE - multiple sequence alignmentT_COFFEE ProbCons - Probabilistic Consistency-based Multiple Alignment of Amino Acid SequencesProbCons MAFFT - Multiple Sequence Alignment based on fast Fourier transformMAFFT

clustalx Clustal X is a new windows interface for the ClustalW multiple sequence alignment program. ftp://ftp-igbmc.u-strasbg.fr/pub/ClustalX/

Alignment editor Jalview – Seaview CINEMA

seaview

cinema

Another presentation Seqlogo –Weblogo:

An example gi: gi: gi: