In practice, optical tweezers are very expensive, custom-built instruments. These instruments usually start with a commercial optical microscope.

Slides:



Advertisements
Similar presentations
If the Sun passes between the Earth and a pair of stars as shown, and the Moon passes in front of the Sun and totally eclipses it so the stars are visible,
Advertisements

Applications of optical tweezers in protein-protein interaction analysis Ran Yang.
Lecture 11. Microscopy. Optical or light microscopy involves passing visible light transmitted through or reflected from the sample through a single or.
Microscopy Outline 1.Resolution and Simple Optical Microscope 2.Contrast enhancement: Dark field, Fluorescence (Chelsea & Peter), Phase Contrast, DIC 3.Newer.
REFRACTION OF LIGHT. REFRACTION THE BENDING OF LIGHT DUE TO A CHANGE IN ITS SPEED.
Optical Tweezers F scatt F grad 1. Velocity autocorrelation function from the Langevin model kinetic property property of equilibrium fluctuations For.
Force and Velocity Measured for Single Molecules of RNA Polymerase Michelle D. Wang, Mark J. Schnitzer, Hong Yin, Robert Landick, Jeff Gelles, Steven M.
©CMBI 2006 Molecular motors At the organism – population level, motors are needed to transfer materials. At the organelle – organ level, motors are needed.
IVA. Electromagnetic Waves and Optics
Lecture 8: Measurement of Nanoscale forces II. What did we cover in the last lecture? The spring constant of an AFM cantilever is determined by its material.
Raman Spectroscopy Spectrum is defined by: 1.position of the peaks 2.Intensity of the peaks Peak positions are a function of the force constants, and are.
Methods: Single-Molecule Techniques Biochemistry 4000 Dr. Ute Kothe.
Physics 1502: Lecture 29 Today’s Agenda Announcements: –Midterm 2: Monday Nov. 16 … –Homework 08: due Friday Optics –Index of Refraction.
Motor Proteins - Experiments Biochemistry 4000 Dr. Ute Kothe.
Reading Activity Questions? IB Assessment Statements Topic Polarization: Describe what is meant by polarized light Describe polarization.
Polarization.
The speed of light is a constant because the electric and magnetic fields support each other. If the speed of light was not constant energy would not be.
P = h/λ Slides from Yann Chemla— blame him if anything is wrong!
Using Optical Tweezers as a Tool in Undergraduate Labs. Paul Ingram, Ido Braslavsky and David F. J. Tees Dept of Physics and Astronomy, Ohio University,
Announcements HW: Due Tuesday Oct 27 th. Start looking at an article to do your write-up on. Best article is from Nature, Science, Cell. (though can choose.
An Introductory Information about Optical Tweezers Mustafa Yorulmaz Koç University, Material Science and Engineering.
Announcements HW: Due Tuesday Oct 27 th. Start looking at an article to do your write-up on. Best article is from Nature, Science, Cell. (though can.
Shaobin Guo 11/20/2012. various types of Single-molecule force spectroscopy Optical tweezers Magnetic tweezers Atomic force microscopy (AFM) Micro-needle.
Physics 014 Images. Topics  Plane mirrors  Spherical mirrors  Thin lenses.
CH-33: Electromagnetic Waves
2 pt 3 pt 4 pt 5pt 1 pt 2 pt 3 pt 4 pt 5 pt 1 pt 2pt 3 pt 4pt 5 pt 1pt 2pt 3 pt 4 pt 5 pt 1 pt 2 pt 3 pt 4pt 5 pt 1pt Vocabulary Reflection and Mirrors.
Simple Double Beam Spectrometer
Announcements Lec 10 Quiz today--ATPase Homework #5 Assigned includes Reading, Chpt 3 ECB Most students like in-class assignments (good!)
Figure 22.1: During its power stroke, Myosin exerts a force on an actin filament, propelling the motor to the left. Scale bar = 6 nm. (From R. D. Vale.
Single Molecule: Detection and Manipulation Ilan Tsafrir Tamar Arzi Physics of Complex Systems - Weizmann Institute of Science Interaction Between Membranes.
Small forces – Big results Abhijit Sarkar Assistant Professor Physics Department The Catholic University of America Washington D.C.
The Spectrum of EM Waves According to wavelength or frequency, the EM waves can be distinguished into various types. There is no sharp boundary.
Introduction and applications 1.Homework #3 will be assigned. 2.Quiz today 3.Bending & twisting rigidity of DNA with Magnetic Traps. “MT” Many slides came.
Completely unpolarized horizontally traveling light of intensity I 0 is normally incident on a vertical polarizer. The light that gets through is then.
Introduction & applications Part II 1.No HW assigned (HW assigned next Monday). 2.Quiz today 3.Bending & twisting rigidity of DNA with Magnetic Traps.
3.052 Nanomechanics of Materials and Biomaterials Prof. Christine Ortiz DMSE, RM Phone : (617) WWW :
1 James N. Bellinger Robert Handler University of Wisconsin-Madison 11-Monday-2009 Laser fan non-linearity James N. Bellinger 20-March-2009.
Unit 2 Lesson 3 Technology Systems. Big IDEA Big Idea: There are nine “Core Technologies” that are fundamental to all technology systems that must be.
Date of download: 6/25/2016 Copyright © 2016 SPIE. All rights reserved. Schematic optical layout of the instrument. Color box legend: Upright optical tweezers.
Date of download: 6/25/2016 Copyright © 2016 SPIE. All rights reserved. (a) Scheme of the femtosecond laser nanosurgery microscope with quasi-Bessel beam.
Date of download: 6/27/2016 Copyright © 2016 SPIE. All rights reserved. Schematic of the experimental setup. (1) Nd:YVO4 laser. (2) Beam expander. (3)
Date of download: 7/8/2016 Copyright © 2016 SPIE. All rights reserved. Through-the-objective TIRF creates the evanescent field on the aqueous side of the.
Volume 100, Issue 8, Pages (April 2011)
Volume 107, Issue 4, Pages (August 2014)
電磁波或光 但如此相干coherent的光很不容易形成! 不相干的光極易發散!
Volume 113, Issue 9, Pages (November 2017)
Volume 115, Issue 4, Pages (November 2003)
Volume 105, Issue 5, Pages (September 2013)
Lecture 24 Tubulin and Microtubule dynamics.
Force Spectroscopy with Dual-Trap Optical Tweezers: Molecular Stiffness Measurements and Coupled Fluctuations Analysis  M. Ribezzi-Crivellari, F. Ritort 
Volume 27, Issue 18, Pages e6 (September 2017)
On the Origin of Kinesin Limping
Volume 100, Issue 8, Pages (April 2011)
Volume 101, Issue 2, Pages (July 2011)
Optical Pushing: A Tool for Parallelized Biomolecule Manipulation
Volume 23, Issue 2, Pages (July 2006)
Mechanical Distortion of Single Actin Filaments Induced by External Force: Detection by Fluorescence Imaging  Togo Shimozawa, Shin'ichi Ishiwata  Biophysical.
Volume 107, Issue 6, Pages (September 2014)
Arpita Upadhyaya, Michael P. Sheetz  Biophysical Journal 
Measuring Pushing and Braking Forces Generated by Ensembles of Kinesin-5 Crosslinking Two Microtubules  Yuta Shimamoto, Scott Forth, Tarun M. Kapoor 
Volume 104, Issue 1, Pages (January 2013)
A Hitchhiker's Guide to Mechanobiology
Volume 103, Issue 3, Pages (August 2012)
RNA Polymerase as a Molecular Motor
Felix Kohler, Alexander Rohrbach  Biophysical Journal 
Vocabulary Reflection and Mirrors Refraction and Lenses Colors
Measuring Pushing and Braking Forces Generated by Ensembles of Kinesin-5 Crosslinking Two Microtubules  Yuta Shimamoto, Scott Forth, Tarun M. Kapoor 
Ashley R. Carter, Yeonee Seol, Thomas T. Perkins  Biophysical Journal 
Quantitative Modeling and Optimization of Magnetic Tweezers
Marco Capitanio, Francesco S. Pavone  Biophysical Journal 
Presentation transcript:

In practice, optical tweezers are very expensive, custom-built instruments. These instruments usually start with a commercial optical microscope but add extensive modifications. In addition, the capability to couple multiple lasers into the microscope poses another challenge. High power infrared laser beams are often used to achieve high trapping stiffness with minimal photo-damage to biological samples. Precise steering of the optical trap is accomplished with lenses, mirrors, and acousto/electro-optical devices that can be controlled via computer.

Laser Tweezers and Transcription. A transcription complex is tethered between two streptavidin-coated beads and kept in a continuous buffer flow. As a transcribing polymerase moves along the DNA, it physically pulls the two beads closer together. One bead is held in place with laser tweezers (red funnel) and the other by a pipette. The separation of the beads is measured by video microscopy and used to determine the end-to-end distance of the DNA.

If some external object, like a molecular motor, were to pull the bead away from the center of the trap, a restoring force would be imparted to the bead and thus to the motor. An example trace of a single kinesin motor taking 8 nm steps against a 5-pN force is shown

Group Problem on Polarization A vertically polarized light beam is incident on two ideal polarizers P1 and P2 following one another with P1 oriented at 45 o to the vertical and P2 oriented horizontally. If the incident intensity is 1 unit, what is the transmitted intensity after P2? What happens in the same situation if the incident light of 1 unit is unpolarized?

actin (red), vinculin (an adhesion plaque protein; green), and the nucleus (blue)