Femtochemistry: A theoretical overview Mario Barbatti V – Finding conical intersections This lecture can be downloaded at

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Femtochemistry: A theoretical overview Mario Barbatti V – Finding conical intersections This lecture can be downloaded at lecture5.ppt

2 Antol et al. JCP 127, (2007) pyridone formamide Where are the conical intersections?

3 Conical intersectionStructureExamples TwistedPolar substituted ethylenes (CH 2 NH 2 + ) PSB3, PSB4 HBT Twisted-pyramidalizedEthylene 6-membered rings (aminopyrimidine) 4MCF Stilbene Stretched- bipyramidalized Polar substituted ethylenes Formamide 5-membered rings (pyrrole, imidazole) H-migration/carbeneEthylidene Cyclohexene Out-of-plane OFormamide Rings with carbonyl groups (pyridone, cytosine, thymine) Bond breakingHeteroaromatic rings (pyrrole, adenine, thiophene, furan, imidazole) Proton transferWatson-Crick base pairs Primitive conical intersections

4

5 Conical intersections: Twisted-pyramidalized Barbatti et al. PCCP 10, 482 (2008)

6 Conical intersections in rings: Stretched-bipyramidalized

7 The biradical character Aminopyrimidine MXS CH 2 NH 2 + MXS

8 The biradical character 22 1*1* S 0 ~ (  2 ) 2 S 1 ~ (  2 ) 1 (  1 * ) 1

9 One step back: single  -bonds Barbatti et al. PCCP 10, 482 (2008) 22   2 CH 2 SiH 2 22   2 CH 2 CH 2 22   CH 2 NH 2 + 22   2 CH 2 CHF

10 One step back: single  -bonds 22   2 C2H4C2H4C2H4C2H4 

11 One step back: single  -bonds Michl and Bonačić-Koutecký, Electronic Aspects of Organic Photochem The energy gap at 90° depends on the electronegativity difference (  ) along the bond.

12 One step back: single  -bonds  depends on: substituents solvation other nuclear coordinates For a large molecule is always possible to find an adequate geometric configuration that sets  to the intersection value.

13 Urocanic acid Major UVB absorber in skin Photoaging UV-induced immunosuppression

14 Finding conical intersections Three basic algorithms: Penalty function (Ciminelli, Granucci, and Persico, 2004; MOPAC) Gradient projection (Beapark, Robb, and Schlegel 1994; GAUSSIAN) Lagrange-Newton (Manaa and Yarkony, 1993; COLUMBUS) Conical intersection optimization: Minimize: f(R) = E J Subject to: E J – E I = 0 H IJ = 0 Keal et al., Theor. Chem. Acc. 118, 837 (2007) Conventional geometry optimization: Minimize: f(R) = E J

15 Penalty function Function to be optimized: This term minimizes the energy average Recommended values for the constants: c 1 = 5 (kcal.mol -1 ) -1 c 2 = 5 kcal.mol -1 This term (penalty) minimizes the energy difference

16 Gradient projection method E R perpend RxRx E1E1 E2E2 E R parallel RxRx E1E1 E2E2 Minimize in the branching space: Minimize in the intersection space: E J - E I EJEJ Gradient  E 2 Projection of gradient of E J

17 Gradient projection method Gradient used in the optimization procedure: Constants: c 1 > 0 0 < c 2  1 Minimize energy difference along the branching space Minimize energy along the intersection space

18 Lagrange-Newton Method A simple example: Optimization of f(x) Subject to  (x) = k Lagrangian function: Suppose that L was determined at x 0 and 0. If L(x, ) is quadratic, it will have a minimum (or maximum) at [x 1 = x 0 +  x, 1 = 0 +  ], where  x and  are given by:

19 Lagrange-Newton Method

20 Lagrange-Newton Method Solving this system of equations for  x and  will allow to find the extreme of L at (x 1, 1 ). If L is not quadratic, repeat the procedure iteratively until converge the result.

21 Lagrange-Newton Method In the case of conical intersections, Lagrangian function to be optimized: minimizes energy of one state restricts energy difference to 0 restricts non-diagonal Hamiltonian terms to 0 allows for geometric restrictions

22 Lagrange-Newton Method Lagrangian function to be optimized: Expanding the Lagrangian to the second order, the following set of equations is obtained: Compare with the simple one-dimensional example:

23 Lagrange-Newton Method Lagrangian function to be optimized: Expanding the Lagrangian to the second order, the following set of equations is obtained: Solve these equations for Update Repeat until converge.

24 Comparison of methods LN is the most efficient in terms of optimization procedure. GP is also a good method. Robb’s group is developing higher-order optimization based on this method. PF is still worth using when h is not available. Keal et al., Theor. Chem. Acc. 118, 837 (2007)

25 Crossing of states with different multiplicities Example: thymine Serrano-Pérez et al., J. Phys. Chem. B 111, (2007)

26 Crossing of states with different multiplicities Lagrangian function to be optimized: Now the equations are: Different from intersections between states with the same multiplicity, when different multiplicities are involved the branching space is one dimensional.

27 Three-states conical intersections Example: cytosine Kistler and Matsika, J. Chem. Phys. 128, (2008)

28 Conical intersections between three states Lagrangian function to be optimized: This leads to the following set of equations to be solved: Matsika and Yarkony, J. Chem. Phys. 117, 6907 (2002)

29 Devine et al. J. Chem. Phys. 125, (2006) Example of application: photochemistry of imidazole Fast H elimination Slow H elimination

30 Devine et al. J. Chem. Phys. 125, (2006) Example of application: photochemistry of imidazole Fast H elimination Slow H elimination Fast H elimination:  * dissociative state Slow H elimination: dissociation of the hot ground state formed by internal conversion How are the conical intersections in imidazole?

31 Predicting conical intersections: Imidazole

32 Barbatti et al., J. Chem. Phys. 130, (2009)

33 Geometry-restricted optimization (dihedral angles kept constant) Crossing seam It is not a minimum on the crossing seam, it is a maximum!

34 Pathways to the intersections

35 At a certain excitation energy: 1. Which reaction path is the most important for the excited-state relaxation? 2. How long does this relaxation take? 3. Which products are formed?

36 Time evolution

37

38 Next lecture Transition probabilities Contact This lecture can be downloaded at lecture5.ppt