What is the answer to Life, the Universe and Everything?

Slides:



Advertisements
Similar presentations
How Does Nature Recycle Nutrients?
Advertisements

Section M Nitrogen metabolism
Chapter 6.
The Molybdenum Cofactor: Moco
Cycles in Nature ¨ Law of Conservation of Matter” Matter cannot be created nor destroyed in any chemical reaction. It can only be transformed from one.
Copyright Pearson Prentice Hall
Why and how is matter recycled in our ecosystem?
Tollund Man: Died about 2200 years ago in what is now Denmark.
Lecture Notes – Geologic Eras. Geologic Timescale The geologic timetable is divided into 4 major eras:  The oldest era is called the Pre-Cambrian Era.
Overview energy is required for all cellular work most organisms produce ATP by using energy stored in the bonds of organic molecules such as carbohydrates.
 Plants are the main source of breathable oxygen for all animals that depend on it.  During photosynthesis plants absorb carbon dioxide and release.
Previously in Chem104: Redox reactions are donor-acceptor chemistry like acid/base reactions Important Equations: E rxn = E red + E ox  G = -n F E rxn.
Chapter 3Food. Why do we need Food? 1.Source of Energy 2.To make chemicals needed for metabolic reactions 3.As the raw materials for growth and repair.
Plants and nitrogen Plants need nitrogen to grow. It’s present in DNA, RNA, the amino acids that make up proteins, ATP, chlorophyll and most vitamins.
Do Now: Where can carbon be found on Earth?. Fossil Fuels: Coal, Natual Gas, Oil Shells of Marine Organisms: Calcium Carbonate Cells of Living Organisms.
Soils & Plant Nutrition Rodney Pond PhD Student School of Environmental and Forest Sciences.
Physical Geology Chapter 9 Geologic Time. Geologic Column Represents a timeline of earth’s history Combined observations from many places, many people.
Chemistry of Life. The basics of Chemistry Matter is recycled and rearranged for living organisms Living matter is made up of different substances. Example.
Plant Nutrition and Soils Chapter 29. Plant Nutrition Plant Nutrition- uptake from the environment of all raw materials required for essential biochemical.
Biogeochemical Cycles
What is the answer to Life, the Universe and Everything?
INTRODUCTION OF D-BLOCK ELEMENTS. Why are they called d-block elements? Their last electron enters the d-orbital.
BioChemical Cycles Earth cycles Living.
 General molybdenum importance  Enzymes that use Moco › 3 families  Biosynthetic pathway › Genes involved  Deficiency  Current Literature.
AP Biology The History of Life “…sparked by just the right combination of physical events & chemical processes…”
AP Biology Chapter 26. Origin of Life. AP Biology The historical tree of life can be documented with evidence. The Origin of Life.
BIOGEOCHEMICAL CYCLES Nitrogen Cycle Water Cycle Carbon Cycle.
Balancing Redox Reactions Chem 12. Application of oxidation numbers: Oxidation = an increase in oxidation number Reduction = a decrease in oxidation number.
Types of Chemical Reactions
UEQ: How does the structure of matter influence its physical and chemical behavior?
THE CALVIN CYCLE Section Carbon Fixation by the Calvin Cycle The Second set of reactions in photosynthesis involves a biochemical pathway known.
Minerals as co-ezymes Dr. Shariq Syed Shariq AIKC/SYB/2014.
6.1 Section Objectives – page 141 Relate the structure of an atom to the identity of elements. Section Objectives: Relate the formation of covalent and.
Biogeochemical Cycles
Chemistry in Biology Sept. 3, 2008 Top 11 elements in living things Oxygen (O), Carbon (C), Hydrogen (H)=93% Nitrogen (N)=3.3% Calcium (Ca) Phosphorus.
Ionic Bonding (Part IV)
Problems and profit with waste Lesson 2 Micro-organisms and decay.
Chemical Equations and Reactions Chapter 8
OBJECTIVE: Create the geologic timeline.
Biogeochemical Cycles
1 Chapter 20 Oxidation-Reduction Reactions (Redox Reactions)
CEMISTRY of CELLS Cells and Water From foukeffa.org Written by David Wilson Uintah High School GA Ag Ed Curriculum Office To accompany the Georgia Agriculture.
Chapter 18.  Define key terms and concepts.  Identify redox reactions that occur in daily life.  Identify what is being oxidized (reducing agent) and.
The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.
Origin of Life “…sparked by just the right combination of physical events & chemical processes…”
Cycles in Ecosystems Oxygen Water Carbon Nitrogen.
Ionic Bonding (Part 3) The Last Step: Adding Polyatomic Ions.
Do Now: In your notebooks, answer: What nutrients do we need to survive? List as many as you can think of, and why we need them.
Transition Metals Transition Metals. bulk elements trace elements for some species Periodic Table.
Biogeochemical Cycles.  All organisms are interconnected by vast global recycling systems known as nutrient cycles, or biogeochemical cycles  A biogeochemical.
THE NITROGEN CYCLE.
Nutrients and Soil Organic Matter for Crops: Care for these RESOURCES
Micronutrient elements
Chemistry of the Ocean.
The Nitrogen Cycle.
THE NITROGEN CYCLE Lecture-1 Ecological Management
Dr. Pandit Khakre Asst. Prof Mrs. K.S.K. College, Beed.
Unit 13: More Chemical Reactions
Redox Reactions.
We need cycles To recycle matter
Reactions of acids AQA Chemical Changes 1 Reactivity of metals
VIII. Cycles in the Environment
3-4 Ecosystem Recycling Water cycle- Cells contain 70-90% water for chemical reactions to occur. Carbon cycle- part of organic materials (glucose) that.
Origin of Life Biology Chapter 12.
A Quick Look at the History of Life on Earth
Which earth cycle am I? Answer the questions to figure out what I am. Am I the Water Cycle Nitrogen Cycle Carbon Cycle Oxygen Cycle.
February 12, 2002 Chapter 26 Nitrogen Acquisition
Do Now 5.1 (HW Check 15.1,2,5) Objective: Describe the leading hypotheses of abiogenesis, which describe how life most likely began on Earth. Task: 1.
Determining Products of Reactions AP Chemistry
The Cycling of Matter Energy flows in one direction starting as solar radiation and finally leaving as heat Nutrients Cycle! Absorbed by organisms from.
Presentation transcript:

What is the answer to Life, the Universe and Everything?

HadeanArchean Proterozoic Mesozoic Cenozoic Paleozoic in the beginning… Nov today 1 bya2 bya3 bya4 bya

3.5 bya! Oldest fossils: stromatolites = Calcium carbonate deposits from blue-green algae or cyanobacteria.blue-green algae 0.5 bya N H 2 --> 2 NH 3 BANG! Hadean bya Archean bya Oldest rocks? Most famous characteristic? Nitrogen “fixing” bacteria: 4.5 bya!

What do we find deep within cyanobacteria’s amazing N 2 -fixing machinery?

Mo Molybdenum (Greek ‘molybdos’ ) lead-like “Moly” # 42 The Answer to Life, the Universe, and Everything (?)

540 mya Mesozoic mya Global catastrophe! Cenozoic 65 mya - today! “age of mammals” “age of dinosaurs” quagga Paleozoic mya 250 mya65 mya Plants!! Animals!! Another extinction!! Has evolution moved on without #42 - Mo?

Grown without Mo Grown with Mo

Tobacco plants (Arabidopsis thaliana) Healthy (wild type) Sick (mutant) All plants require the molybdoenzyme Nitrate Reductase nitrate nitrite Nitrate Nitrite Proteins

in the Beginning of Life… 1 bya2 bya3 bya4 bya Cyanobacteria Need Mo Plants Need Mo

What about the animals?

sulfite oxidase xanthine oxidase enzyme in mammalian milk Got Mo? aldehyde oxidase two enzymes in livers of mammals and avians

Why the correct oxidation state matters

MRI of brain of deceased baby with Sulfite Oxidase Deficiency MRI of healthy brain

The baby died because this reaction didn’t happen: SO H 2 O ---> SO H + + 2e- Sulfite Sulfate S 4+ S 6+ The baby has a genetic defect in the enzyme that catalyzes this reaction. Babies with this genetic disease die within hours. The enzyme is Sulfite Oxidase. You have it in your liver.

Oxidation SO H 2 O ---> SO H + + 2e- half reaction S 4+ in Sulfite S 6+ in Sulfate Reduction Mo e- ---> Mo 4+ half reaction Net redox reaction SO H 2 O + Mo > SO H + + Mo 4+ Review the terms:

aldehyde oxidase sulfite oxidase xanthine dehydrogenase Human Molybdenum Cofactor Disorder: Combined Oxidase Deficiency sulfite sulfate Mental/motor retardation Epileptic seizures Brain atrophy Dislocated ocular lens death xanthine uric acid xanthinuria (gout) hypoxanthine xanthine No detoxification of heterocycles

+ Mo defective molybdoenzymes Human Molybdoenzyme Deficiencies: Cured with more Mo? Not repaired by adding Mo alone Non-functional enzyme

BioinorganicChemistry 1. Not having the structure or organization of living bodies 2. Not characterized by vital processes 3. Not fundamental or related; extraneous 4. Pertaining to compounds that are not hydrocarbons 5. Mineral 1. (Gr. “bios” ‘life, course or way of living’). In compounds formed in Greek itself, as biography; and in modern scientific words in which bio- is extended to mean ‘organic life.’ 2. A prefix meaning “life” Websters, OED

BioinorganicChemistry Molybdenum EnzymesHemoglobin (Fe) Manganese Enzymes Zinc Enzymes (Zn) Auranofin (Au) arthritis Cis-platin (Pt) cancer Copper Enzymes (Cu) Vitamin B12 (Co) Iron enzymes Tungsten Enzymes Therapeutics V, Ti, Cr

BioinorganicChemistry Molybdenum EnzymesHemoglobin (Fe) Manganese Enzymes Zinc Enzymes (Zn) Aurial (Au) arthritis Cis-platin (Pt) cancer Copper Enzymes (Cu) Vitamin B12 (Co) Iron enzymes Tungsten Enzymes  Therapeutic s  V, Ti, Cr

Questions asked of molybdoenzymes and their model compounds: -What is the redox potential ( energy of) Mo redox reactions? - What are the structural details? What is bond order? (angles, bond distances) -How well do models mimic reactions of Mo in enzymes? in structure in reactivity

Mo Chemistry 1.Oxidation states Mo occurs in oxidation states from 0  +6 Project 1 will generate complexes in states +4 – 6, same as enzymes

Mo Chemistry 2. Geometries: Mo complexes have Coordination Numbers from CN 4  8 Project 1 uses reagents or makes products with CN 4  7

3. Reaction ChemistryMo S; dtc ligand Mo O; Mo=O ligands Mo Chemistry

What do you get if you multiply nine by six? Molybdenum, atomic # 42: is it the answer to Life, the Universe and Everything? What’s the Ultimate Question? Adams speculates in “The Restaurant at the End of the Universe”: Sure looks like it!

A proposed catalytic cycle for how Mo oxidizes SO 3 2-

Mo molybdopterin pterin dithiolene

Mo Ball and stick diagram Chemical structure diagram

   Protein structure destroyed Mo compound released (isolated) rapid decomposition