Integrating Health Information Resources with Web-Based Clinical Information Systems James J. Cimino, MD Columbia University, New York, New York Guilherme.

Slides:



Advertisements
Similar presentations
NCBI/WHO PubMed/Hinari Course NCBI Literature Databases: PubMed Background.
Advertisements

A Truly Meaningful Use of Electronic Health Records Freely Available to All: Automated Anticipation and Resolution of Clinical Information Needs at the.
Amy Sheide Clinical Informaticist 3M Health Information Systems USA Achieving Data Standardization in Health Information Exchange and Quality Measurement.
Update on Vocabularies and Value Sets for Meaningful Use Betsy Humphreys, MLS, FACMI Deputy Director National Library of Medicine National Institutes of.
Finding Answers Fast Navigating Through Point of Care Resources …and Accessing them with your Mobile Device! Session Presenter: Marcus Vaska.
NATIONAL LIBRARY OF MEDICINE The PubMed ID and Entrez, PubMed and PubMed Central Edwin Sequeira National Center for Biotechnology Information June 21,
University of Pittsburgh Department of Biomedical Informatics Healthcare institutions have established local clinical data research repositories to enable.
The Librarian Infobutton Tailoring Environment (LITE) James J. Cimino National Institutes of Health and Columbia University.
Accessing Sources Of Evidence For Practice Introduction To Databases Karen Smith Department of Health Sciences University of York.
An Integrated Approach to Computer-Based Decision Support at the Point of Care James J. Cimino, M.D., FACMI, FACP Professor of Biomedical Informatics and.
Practical Considerations for Exploiting the World Wide Web to Create Infobuttons James J. Cimino, Jianhua Li, Mureen Allen, Leanne M. Currie, Mark Graham,
The Role of Standard Terminologies in Facilitating Integration James J. Cimino, M.D. Departments of Biomedical Informatics and Medicine Columbia University.
Technical Aspects of the Infobutton Manager James J. Cimino Columbia University.
Computer-Assisted Decision Making in the Twenty-First Century James J. Cimino, M.D. Departments of Medical Informatics and Medicine Columbia University.
Guilherme Del Fiol, MD, MS
The Columbia University Experience: Infobuttons and the Infobutton Manager James J. Cimino, M.D. Department of Biomedical Informatics Columbia University.
Webinar: Publishing for the EHR 101 James J. Cimino Chief, Laboratory for Informatics Development National Institutes of Health Clinical Center May 20,
Supporting Medical Decision Making with Electronic Medical Records James J. Cimino Departments of Medicine and Medical Informatics Columbia University.
BTRIS: The NIH Biomedical Translational Research Information System James J. Cimino Chief, Laboratory for Informatics Development NIH Clinical Center.
Allen Pavilion Medicine Grand Rounds James J. Cimino, MD, FACP, FACMI Professor of Medicine and Biomedical Informatics Columbia University May 13, 2004.
Infobuttons: Linking Clinical Information Systems to On-Line Information Resources to Resolve Clinician Information Needs James J. Cimino, M.D. Biomedical.
Integration of Information Resources at the Point of Need James J. Cimino, M.D. Departments of Medicine and Medical Informatics Columbia University.
Resolving Clinicians’ On-Line Information Needs: A Brief History of Buttons James J. Cimino, M.D. Biomedical Informatics and Medicine Columbia University.
Resolving Clinicians’ On-Line Information Needs: A Brief History of Buttons James J. Cimino, M.D. Biomedical Informatics and Medicine Columbia University.
Harnessing World Wide Web Technology and Standardized Terminology to Improve Decision Making for Patients and Providers James J. Cimino Departments of.
James J. Cimino MD, Jianhua Li MD, Suzanne Bakken RN DNSc, Vimla L. Patel PhD Department of (Bio)Medical Informatics Columbia University New York, New.
Just In Time Education: Linking Clinical and Educational Systems James J. Cimino, MD Professor of Medicine and Biomedical Informatics Columbia University.
Use, Usability, Usefulness and Impact of an Infobutton Manager James J. Cimino, M.D. Department of Biomedical Informatics Columbia University College of.
ETIM-1 CSE 5810 CSE5810: Intro to Biomedical Informatics Mobile Computing to Impact Patient Health and Data Exchange and Statistical Analysis Presenter:
A Robust Health Data Infrastructure P. Jon White, MD Director, Health IT Agency for Healthcare Research and Quality
Development Principles PHIN advances the use of standard vocabularies by working with Standards Development Organizations to ensure that public health.
Access to Information Sources through Controlled Vocabulary James J. Cimino, M.D. Department of Medical Informatics Columbia University.
Retrieval 2/2 BDK12-6 Information Retrieval William Hersh, MD Department of Medical Informatics & Clinical Epidemiology Oregon Health & Science University.
Mary Beth Schell Adam Dodd NC AHEC Digital Library National AHEC: Wednesday June 23, 2010 Using Social Networking Tools to Support Graduate Medical Education:
Our Joint Playing Field: A Few Constants Change Change Our missions (if defined properly) Our missions (if defined properly) Importance of Community Engagement.
The NISO Question/Answer Transaction Protocol (QATP) AVIAC January 2004 Donna Dinberg Library and Archives Canada Mark Needleman Sirsi Corporation.
Page 1. July 2005 Page 2 Type search terms into box on the main page. Tutorial. Save searches in My NCBI ‘cubby.’ Enter PubMed by double- clicking in.
Indo-US Workshop, June23-25, 2003 Building Digital Libraries for Communities using Kepler Framework M. Zubair Old Dominion University.
Using the Biomedical Library and its Resources Public Health & Epidemiology PHE 131 Winter 2011 Becoming Efficient Information Managers.
Survey of Medical Informatics CS 493 – Fall 2004 September 27, 2004.
Chapter 6 – Data Handling and EPR. Electronic Health Record Systems: Government Initiatives and Public/Private Partnerships EHR is systematic collection.
EMR Data Portability Setting the Stage for Interoperability May 5, 2008 By: Harley Rodin & Ed Chang.
MedSearch Vaishnav Janardhan COMS E6125 Web-Enhanced Information Management.
1 CS 502: Computing Methods for Digital Libraries Lecture 19 Interoperability Z39.50.
CBSOR,Indian Statistical Institute 30th March 07, ISI,Kokata 1 Digital Repository support for Consortium Dr. Devika P. Madalli Documentation Research &
Intranet Technology in Hospital Information Systems James J. Cimino, M.D. Department of Medical Informatics Columbia University.
Retrieval 1/2 BDK12-5 Information Retrieval William Hersh, MD Department of Medical Informatics & Clinical Epidemiology Oregon Health & Science University.
Medical searching Kazem Heidari. Reading in medicine Browsing  Reading for fun of it  Books and journals are used. Reading for information  Approach.
Clinical Collaboration Platform Overview ST Electronics (Training & Simulation Systems) 8 September 2009 Research Enablers  Consulting  Open Standards.
Networking and Health Information Exchange Unit 7c Supporting Standards for EHR Application.
Journal Searching Nancy B. Clark, M.Ed. Director of Medical Informatics Education FSU College of Medicine 1 All recourses are available online in Medical.
Rapid information retrieval by creating a parallel implementation of Medline Bob Badgett Dept of Medicine UTHSC San Antonio 1/2006.
Table of Contents – Part B HINARI Resources –Clinical Evidence –Cochrane Library –EBM Guidelines –Essential Evidence Plus –HINARI EBM Journals.
Infobuttons: Context-specific Links from Clinical Systems to On-Line Knowledge Resources to Anticipate and Address Clinician Information Needs at the Point.
Table of Contents – Part B HINARI Resources –Clinical Evidence –Cochrane Library –EBM Guidelines –BMJ Practice –HINARI EBM Journals.
Implementation of National Standards (LOINC, SNOMED) for Electronic Reporting of Laboratory Results: BioSense Experience Nikolay Lipskiy 1, DrPH, MS, MBA;
Current Status of Clinical Systems Epic – InfoButton with direct connection to specific resources Eclipsys – Infobutton tab using HL7 standard.
Health Management Information Systems Unit 3 Electronic Health Records Component 6/Unit31 Health IT Workforce Curriculum Version 1.0/Fall 2010.
Copyright © 2009 by The McGraw-Hill Companies, Inc. All Rights Reserved. McGraw-Hill/Irwin Chapter 2 Clinical Information Standards – Unit 3 seminar Electronic.
Personalized Prediction and Resolution of Clinician Information Needs James J. Cimino, M.D. Departments of Biomedical Informatics and Medicine Columbia.
TEACHING BIOMEDICAL INFORMATICS LIBRARY AS PARTNER Evelyn B. Morgen, Director UConn Health Center Library
Functional EHR Systems
William Hersh, MD Professor and Chair
Just In Time Education: Linking Clinical and Educational Systems
Functional EHR Systems
Department of Medical Informatics
PubMed.
Table of Contents – Part B
Presentation transcript:

Integrating Health Information Resources with Web-Based Clinical Information Systems James J. Cimino, MD Columbia University, New York, New York Guilherme Del Fiol, MD, MS Intermountain Health Care, Salt Lake City, Utah William R. Hersh, MD Oregon Health and Science University, Portland, Oregon J. Marc Overhage, MD, PhD Regenstrief Institute, Indianapolis, Indiana

Panel Outline Motivation History OHSU experience IHC experience Columbia experience Regenstrief experience Institution-independent solutions Open discussion

Motivation for Linking Clinical Systems and Resources Information needs arise with clinical systems The user is using a computer Questions can be anticipated based on context Resource can be anticipated based on question Retrieval can be automated using question, resource and context

History: the Pre-Web Years Yale: Hepatopix and Psychtopix - preconstructed topic-specific queries to Medline Duke: TMR-NLM link - acid-base nomogram to Medline using graphical input MGH: Interactive Query Workstation - UMLS to map to multiple resources - what can the resource answer? SUNY Buffalo: Medical Desktop - cut and paste into UMLS-based Term Linker Pittsburgh: Chartline - used UMLS to match text in reports to MeSH, then searched Medline

History: the Pre-Web Years (continued) Columbia: Medline Button - used ICD9 data, through UMLS, to search Medline Yale: NetMenu and Meta-Front End: UMLS translation to terminologies used by multiple resources Duke: Internet Gopher - hardwired links from Care Maps to Internet-based resources

How the Web Changed Things Local resources became widely available Clinical systems became Web-based HTML and URLs made integration easier

Challenges Integration without distraction Understand information needs Finding appropriate resources Capturing the clinical context for use in retrieval Institution-independence to allow sharing Patient confidentiality Copyright and license restrictions Maintenance

Linking Knowledge to Practice William Hersh, M.D. Department of Medical Informatics & Clinical Epidemiology Oregon Health & Science University

Overview SmartQuery – linking knowledge to practice at OHSU Toward interoperability of knowledge- based resources

SmartQuery (Price & Hersh, 2002) Linkage provided on top of NetAccess, Web- based interface to Siemens Medical Systems (SMS) Lifetime Clinical Record (LCR) repository Context of patient extracted from –Laboratory results – translation from lab system not simple, e.g., Meas ICA, Wh B → calcium, hypocalcemia, hypercalcemia –Diagnosis codes – ICD-9 codes translated to MeSH –Portions of clinical narrative

Resources in SmartQuery Available for free or licensed by OHSU –MEDLINE – via PubMed –Best Evidence (American College of Physicians) – collection of extended, structured abstracts of important journal literature –Harrison’s On-Line (McGraw-Hill) – electronic version of an internal medicine textbook –National Guidelines Clearinghouse (AHRQ) – collection of clinical practice guidelines –CliniWeb – collection of human-reviewed and MeSH-indexed Web pages

SmartQuery selects concepts and offers resources

Results offer linkages to resources

Current status Vendor acquired by another vendor; project on indefinite hold in transition Hard-wired access is not ideal; what we really need is interoperability of clinical information resources…

Rationale: Consider this scenario A primary care clinician of an elderly patient who has hypertension, congestive heart failure, sleep apnea, and obesity –Has charted pertinent information in electronic health record –Now wants recommendations from a guideline with overview of supporting evidence –Later wants to explore recommendations in more detail, including reading systematic review and some original clinical trials it has included –May want basic review of topics seen infrequently in practice

Some impediments for this clinician Cannot link directly from guideline to supporting or background information Wants to access pertinent section of a favorite textbook directly –Does not want to go to each Web site, log on, and use site search engine Would like to navigate across levels of evidence from compendium to systematic review to original clinical trial or other study May want to create personal digital library of preferred content

Impediments for others Publishers –Might desire to allow access to pieces of content but need assurances of revenue and intellectual property protection Content aggregators –Want to “mix and match” content that is “best of breed” but difficult to do across content of different publishers

The current problem: most information is in silos Content Metadata Content Web site Search Engine Other App (eg, EHR) User Most Few

Overcoming the impediments: Interoperability IEEE, 1990: “Ability of two or more systems…to exchange information or use the information that has been exchanged” Used in digital library community to describe seamless access and integration Required to facilitate IR interoperability are –Minimum set of metadata and interapplication interfaces –Cooperation among publishers, vendors, and others to agree upon standards

From silos to interoperability Content Metadata Content Metadata Search Interface Other Application User Site Search Site Search Metadata Repository

How might we achieve this? A starting point is Open Archives Initiative (OAI, OAI promotes the “exposure” of archives’ metadata such that systems can know what content is available and how it can be harvested (Lagoze, 2001) Each record in an OAI collection contains metadata –Protocol has “verbs” for metadata harvesting –Example:

Is this possible? Yes, look to the genomics community, e.g., dtabases of National Center for Biotechnology Information (NCBI) –Literature –Nucleotide and protein sequences –Protein structures –Textbooks and other textual resources –Genomes and map Doing this in clinical medicine will take agreement from publishers and others

The Columbia University Experience: Infobuttons and the Infobutton Manager James J. Cimino, M.D. Department of Biomedical Informatics Columbia University College of Physicians and Surgeons

Medline Button –Translated ICD9-CM to MeSH to search Medline –Hard to build –Did not satisfy users’ needs Columbia Experience Medline Button –Translated ICD9-CM to MeSH to search Medline –Hard to build –Did not satisfy users’ needs Infobuttons –Web-based –Easy to build –Require custom programming –Used preferentially in some settings

Columbia Experience Medline Button –Translated ICD9-CM to MeSH to search Medline –Hard to build –Did not satisfy users’ needs Infobuttons –Web-based –Easy to build –Used preferentially in some settings –Require custom programming Infobutton Manager –Standard set of context variables –Matches context to frequently-asked questions –Each question has corresponding solution –Table-driven Infobuttons –Web-based –Easy to build –Used preferentially in some settings –Require custom programming

34Drug Level InPatient Drugs Any ChildNYPH 33Drug Level InPatient Drugs Any AdultNYPH InfobuttonConceptTaskUserSexAgeInstitute Context Table QuestionURLInfobutton Give me pediatric information for… /pleaflets/… 34 Give me patient information for… /leaflets-english/… 33 Infobutton Table Infobutton Manager

Columbia Experience to Date Questions determined by empiric observation Resources found to answer questions Infobutton Manager links added to WebCIS

Columbia Experience – Next Steps Currently carrying out heuristic evaluation Usability study is next Roll-out to 4000 WebCIS users planned Follow-up observational study to determine: –Usefulness –Impact

Institution-Independent Solutions Contexts are common across institutions Information needs may be common Infobutton Manager is institution-independent “Institute” is a parameter –Questions can be customized by institution –Resources can differ by institution Questions and resources can be shared Terminology is the limiting factor

The Regenstrief Institute Experience J. Marc Overhage, MD, PhD Regenstrief Institute Indianapolis, Indiana

Abstract Many researchers are developing linkages between their clinical information systems and on-line information resources to provide context-sensitive decision support for medical decisions. The discussants of this panel, from the Regenstrief Institute, Oregon Health and Science University, Intermountain Health Car, and Columbia University are all working independently on such solution. They are identifying common problems and common solutions that may lead to collaborative development and resource sharing. The purpose of this panel is to discuss areas of commonality and invite discussion from attendees on their problems and solutions.

Folate

Gopher Example

Gopher

Gopher CPOE Integration 1.Notify one ring of the query 2.Construct and store URL 3.Send URL to browser DLL 4.Browser opens URL PC One Ring Shared Memory Messages DOS/Gopher Browser DLL

Context Institution User Patient demographics –Age –Gender Parameter of interest –Diagnosis (ICD-9) –Laboratory result (LOINC) –Radiology study (text name/local codes) –Question (text)

Logging/Tracking At source Aug 1 10:25:21 flux syslog: |Infomgr|jil7001^CPMC|vc5liu.cpmc.columbia.edu||med|ibutt1600 Aug 1 10:30:19 flux syslog: |Infomgr|jil7001^RMRS|vc5liu.cpmc.columbia.edu||med|ibutt^glucose Aug 1 10:31:33 flux syslog: |Infomgr|jil7001^RMRS|vc5liu.cpmc.columbia.edu||med|ibutt

Other challenges Lots of links increases size of web pages delivered Broken links due to changes in sites Access control –IP – proxy server –Password Fuzzy edges –Clinical sometimes adjunct faculty? –Fellows?

Electronic Health Information Resources at Intermountain Health Care Guilherme Del Fiol, MD, MS Jim Reichert, MD Paul D. Clayton, PhD

Intermountain Health Care (IHC) 21 hospitals, >90 outpatient facilities –4 teaching facilities 500 employed physicians 1.6 million individuals with computer- based clinical data 16,000 clinical system users

Lack of time Limited access to resources Difficulty learning and using multiple resources Variable quality of information Barriers to access health information resources

What we’re doing to lower the barriers Seamless access from the point-of-care –E-resources page: transparent access from clinical information systems –Infobuttons Build clinical questions using patient data and context Take user to the most relevant section within an information resource with a minimum number of mouse clicks In operation since September 2001

How does it work? What are the clinical manifestations of high serum potassium?

i 65 years old female physician lab results Question formulation Resource 3 Resource 1 Resource 2 ? Resource selection Answer retrieval Key factors: Structure Indexing Context

applicationContext = labResults searchString = “Serum potassium” clinicalConcept = terminology = “LOINC” labResult = “High” patientAge = 65 modifier = “Clinical Manifestations” Infobutton request

Arrhythmias: sinus bradycardia, sinus arrest, first degree AV block. Progressive ECG changes: peaked T waves Neuromuscular manifestations: depressed tendon reflexes...

IHC Infobuttons ResourceTerminologies Lab resultsClineguide, MDConsult LOINC, free-text MedicationsMicromedex, Clineguide NDC, free-text Problem listMDConsult, Clineguide, PubMed ICD-9CM, free text

2,247 hits 1,218 hits

Patient Education 13% Lab tests 31% Medications 51% Problems 5%

Challenges Development / Maintenance –Multiple clinical information systems in an institution may need Infobuttons –Adding new resources, changes on APIs –Need for an independent component Selection of resources Structure of resources frequently not driven to Infobuttons

Current status External content resources –Collaborations to improve content structure and Infobutton APIs Internal content resources –Conversion of policies, guidelines, and protocols to XML –Make resources accessible to Infobutton

HL7 Proposal Infobutton Standard API calls

Non-standard APIs POE system Lab results review Outpatient clinical information system i i i Infobutton Manager 1 Infobutton Manager 2 Resource 1 Resource 2 Resource 3 API

Infobutton Manager 1 Infobutton Manager 2 Standard APIs POE system Lab results review Outpatient clinical information system i i i Resource 1 Resource 2 Resource 3 HL7

HL7 proposal Common syntax and terminology for Infobutton managers and information resources API calls Parameters –Main search concept –Application context –Patient context –Modifiers

resource.com/search.cgi searchString= Pneumonia terminology= MeSH conceptOfInterest= D applicationContext= problems ageContext= 45 modifier = treatment What is the treatment for pneumonia ? 45 years old problems

Current Status Draft proposal at HL7 web site Continue discussion –Conference calls to be initiated –Improved draft to be presented at next HL7 meeting – San Diego, Jan 2004 Volunteers are welcome

Open Discussion Understanding how local solutions may be transferable to other settings Identifying challenges to shared solutions Discussion of a standard for evoking resources in context-specific ways Solutions to privacy and copyright issues Establishing mechanisms for collaboration Anything else…