Large-scale expression and automated purification of G-protein-coupled receptors for structure determination Jim F. White 1, Loc B. Trinh 2, Joseph Shiloach.

Slides:



Advertisements
Similar presentations
Supplementary figure 1:
Advertisements

Antibodies Analytical Techniques Utilizing Antibodies: flow cytometry
Ameer Effat M. Elfarash Dept. of Genetics Fac. of Agriculture, Assiut Univ. Gene Expression.
Biochemical Characterization of LNR_A of Human Notch1 and Notch2 Christina Hao.
Expression Vector Expression of cloned genes produces large quantities of protein Components of expression vector 1. replication origin 2. polylingker.
The TAGZyme System September COOH Target Protein PA DAPase The TAGZyme system (I) Q Q H H H H Q Q H H Q Q M M K K H H Q Q H H Q Q H H Q Q DAPase.
Protein Purification and Analysis Day 4. Amino Acids, Peptides, and Proteins.
Purification of bioengineered proteins CPSC 265 Week 12.
Course Code Course Title Credits BMS 500 Responsible Conduct of Research 1 BMS 510F Biochemistry and Cell Biology 10 BMS 512 Critical Thinking 1 BMS 523A.
A Novel Multigene Family May Encode Odorant Receptors: A Molecular Basis for Odor Recognition Linda Buck and Richard Axel Published in Cell, Volume 65,
DNA Extraction
Protein Purification. What do you know about proteins? Why do we need to purify proteins? What are you curious about?
Affinity Chromatography Yongting Wang Jan07. What is AC? Affinity chromatography (AC) is a technique enabling purification of a biomolecule with respect.
Engineering receptors and antibodies for biosensors Author: B. Hock, M. Seifert, K. Kramer Presented by: Abu Bakar Md. ISMAIL & Balakrishnan RAMANATHAN.
Protein Purification. Why purify Proteins? Characterize Function Activity Structure Study protein regulation and protein interactions Use in assays Produce.
LUMIER-Assays Dr. Manfred Koegl Protein Interaction Unit
Towards Systematic Identification of cdiGMP Binding Proteins
Introduction to biotechnology Haixu Tang School of Informatics.
Southern Taiwan University Development of High Efficiency Purification Method of Recombinant EGFP Proteins with New Immobilized Metal Ion Affinity Chromatography.
Manufacture of Human Interleukin 13 Protein Using a Prokaryotic Expression System Ryan Rupp, York College of Pennsylvania, Department of Biological Sciences.
Figure 16-1 Essential Cell Biology (© Garland Science 2010)
By: Alan Schultz & Jack Bobzien.  Our company has developed a Fab fragment product and needed the purification process verified.  Using E. Coli, propose.
Supplementary Methods TEM (transmission electron microscopy). TEM analysis were performed on EF-TEM LEO 912AB (Carl Zeiss Inc., Germany, Korea Basic Science.
ISMB 2005 Detroit, June 27 th 2005 Proteome 1 Michal Linial Institute of Life Sciences The Hebrew University Jerusalem, Israel Computer Science and Engineering.
Finish up array applications Move on to proteomics Protein microarrays.
Design and Production of a GFP and Human IL-13 Linked Chimeric Protein in E. coli Using pQE-30 Vector Stephen R. Suknaic Department of Biology, York College.
Determining if the fused product of Botox A and GFP can be used to observe the binding patterns of Botulinum toxin A. Felicia Yothers Department of Biological.
A Nanoliter-Scale Nucleic Acid Processor with Parallel Architecture Jong Wook Hong, Vincent Studer, Giao Hang, W French Andreson, Stephen R Quake presented.
High-throughput Screening of Soluble Recombinant Proteins Protein Science, 2002, vol 11, YAN-PING SHIH,1 WEN-MEI KUNG,1 JUI-CHUAN CHEN, CHIA-HUI.
Facility I: Production and Characterization of Proteins
A Study of Starch Metabolizing Proteins Pam Brewer-Michael 1, Tracie Hennen-Bierwagen 2, Myers /James Laboratory 2 1 Marshalltown Community School District,
GFP-based membrane protein overexpression and purification in E. coli and S. cerevisiae Joy Kim Center for Biomembrane Research Department of Biochemistry.
- based on selective non-covalent interaction between an analyte and specific molecules. - is often used in biochemistry in the purification of proteins.
Lab for engineering in infection & immunity Engineering proteins to control immune responses and bacterial pathogenesis Jennifer Maynard, Dept. Chemical.
Protein Purification for Crystallization Dr Muhammad Imran Forman Christian College (A Chartered University) Dr Muhammad Imran Forman Christian College.
CHROMATOGRAPHY Dr. Gobinath.P. What is Chromatography? Chromatography is the science which is studies the separation of molecules based on differences.
From: An Anti–VEGF-B Antibody Fragment Induces Regression of Pre-Existing Blood Vessels in the Rat Cornea Invest. Ophthalmol. Vis. Sci ;58(9):
Discovering Macromolecular Interactions
Fac. of Agriculture, Assiut Univ.
Protein Seperation Methods
Affinity Chromatography
Defining the sequence within the TBSV p33 protein needed for binding to the Rsp5p WW-domain protein in vitro. Defining the sequence within the TBSV p33.
Diagnostic detection of Streptococcus pneumoniae PpmA in urine
Hours after rec PR-Set7 release Ladder kDa 15 PR-Set7 Coomassie
Rpn11p is recruited to the tombusvirus replicase in yeast.
Identification of the host interaction partners of HEV proteins in the human liver and fetal brain cDNA libraries. Identification of the host interaction.
Suppl.Figure 1 Transfected HEK293 cells -130kDa -100KDa Blot: -V5
Large-scale expression and automated purification of G-protein-coupled receptors for structure determination Jim F. White 1, Loc B. Trinh 2, Joseph Shiloach.
Approaches to signal transduction:
Forward Transport Cell
SPLA2-X Stimulates Cutaneous Melanocyte Dendricity and Pigmentation Through a Lysophosphatidylcholine-Dependent Mechanism  Glynis A. Scott, Stacey E.
Shijiao Huang, Danming Tang, Yanzhuang Wang  Developmental Cell 
Rpn11p mutation affects the recruitment of some other host factors into the tombusvirus replicase in yeast. Rpn11p mutation affects the recruitment of.
Structural Basis for Specific Recognition of Reelin by Its Receptors
Volume 3, Issue 2, Pages (August 2002)
Information needed for calculations
Western blotting analysis of purified cytoplasmic membranes.
Volume 87, Issue 7, Pages (December 1996)
Fluorescence-Detection Size-Exclusion Chromatography for Precrystallization Screening of Integral Membrane Proteins  Toshimitsu Kawate, Eric Gouaux  Structure 
Isolation of a cRNP replicative intermediate and vRNP from influenza virus-infected cells. Isolation of a cRNP replicative intermediate and vRNP from influenza.
Partial purification and characterization of CcbP from Anabaena 7120.
Western blot analysis of histone H1.X.
Fig. 2. Pull down of CaV2. 2 by channel C terminal fusion protein
Establishment of OL1 cells.
A. baumannii stimulates the autophagy.
A, scheme of the APC cDNA and the mutant APC cDNAs which were used for reporter gene assays. A, scheme of the APC cDNA and the mutant APC cDNAs which were.
CIN85 interacts with PHD2. CIN85 interacts with PHD2. A, Endogenous PHD2 was immunoprecipitated (IP) with CIN85 antibody from MDA-MB-231, BT-549, and Hs.
Volume 96, Issue 3, Pages (February 2009)
Interaction with PRMT5 involves the RBD1,2 and RGG domains of nucleolin. Interaction with PRMT5 involves the RBD1,2 and RGG domains of nucleolin. A, schematic.
Design and purification of CS1-NKG2D biAb by metal-affinity chromatography. Design and purification of CS1-NKG2D biAb by metal-affinity chromatography.
Presentation transcript:

Large-scale expression and automated purification of G-protein-coupled receptors for structure determination Jim F. White 1, Loc B. Trinh 2, Joseph Shiloach 2 and Reinhard Grisshammer 1 1 Laboratory of Molecular Biology 2 Biotechnology Unit NIDDK, NIH, Bethesda MD Department of Health and Human Services

G-protein-coupled receptors Palczewski et al., Science 289, , 2000 Okada et al., PNAS 99, , 2002

Structure determination of membrane receptors Gene or cDNA isolation System for high level expression Solubilization and purification Characterization and crystallization Structure determination

Rat neurotensin receptor (NTR, NTS-1) 424 aa, 47 kDa rat brain cDNA library Tanaka et al., Neuron 4, 847, 1990 cDNA from S. Nakanishi neurotensin Glp-Leu-Tyr-Glu-Asn-Lys-Pro-Arg-Arg-Pro-Tyr-Ile- Leu

Expression of seven-helix G-protein coupled receptors in Escherichia coli Practical aspects maintenance of “cell line” is easy scale-up of expression is possible cell breakage at large scale not problematic

Tools for assessing expression levels functional receptors → ligand binding analysis total receptor protein → Western blot (‘tag’)

Expression as maltose-binding protein fusion

Influence of tag on expression Tucker & Grisshammer, 1996

Expression in E. coli of the neurotensin receptor fusion protein

Expression levels of NTR fusion protein 1000 receptors/cell ([ 3 H]NT) 3-5 nmol/L of culture ( mg/L) 9 pmol/mg of total solubilized protein 24 pmol/mg of membrane protein

General applicability of expression system Cannabinoid CB1 receptor: No (degraded) Cannabinoid CB2 receptor: pmol/mg (MBP-CB2-HF) (Calandra et al., 1997) Substance K receptor: 7 pmol/mg (MBP-SKR-HMTX) (Grisshammer et al., 1994) Neurotensin receptor: 24 pmol/mg (MBP-T43NTR-TrxA-H10) (Grisshammer & Tucker, 1997) Adenosine A2a receptor: pmol/mg (MBP-A2aTr316-H10) (Weiß & Grisshammer, 2002)

Purification of the neurotensin receptor fusion protein Ni-NTA 1. IMAC 2. ligand affinity column

Immobilized metal affinity chromatography (IMAC) His tag HHHHHHHHHH very robust purification system easy to scale up excellent purification of NTR fusion protein from total cell lysate Grisshammer & Tucker, 1997

IMAC Ni-NTA, crude membranes

P950 air sample Ni-NTA AB air frac NiE NiA waste NiB 35% NT0 NT200 NTE NT NT1K F3 56 B22 White et al., 2004

Large scale purification

1: SN 2: NiFT 3: NiE 4: NTFT 5: NTE

Generation of T43NTR MBP T43NTR Tev TrxA-H10

Backbone conformation of NT(8-13) bound to rat NTS-1 Luca et al., 2003