Examining the interaction of density dependence and stochastic dispersal over several life history scenarios Heather Berkley Bruce Kendall David Siegel.

Slides:



Advertisements
Similar presentations
Population Dynamics Wildlife Management.
Advertisements

Population Dynamics The change in the size, density, dispersion, and age distribution of a population in response to changes in environmental conditions.
WHERE IS F3 IN MODELING LARVAL DISPERSAL? Satoshi Mitarai, David Siegel University of California, Santa Barbara, CA Kraig Winters Scripps Institution of.
Port-en-Bessin, France
WHAT HAPPENS TO THOSE LARVAE ANYWAY?
Populations continued I.Metapopulation Theory A.What is a metapopulation? B.Assumptions of the metapopulation theory II.Stochastic Perturbations & MVPs.
Population Genetics Kellet’s whelk Kelletia kelletii mtDNA COI & 11 microsatellite markers 28 sampling sites across entire range larvae in each capsule.
Turbulent Coexistence Heather Berkley, Satoshi Mitarai, Bruce Kendall, David Siegel.
Biodiversity: periodic boundary conditions and spatiotemporal stochasticity Uno Wennergren IFM Theory and Modelling, Division of Theoretical Biology Linköping.
Population Connectivity and Management of an Emerging Commercial Fishery Crow White ESM 242 ProjectMay 31, 2007.
Spatial population dynamics of brown bears in Scandinavia and Finland Jonna Katajisto Metapopulation Research Group
Marine reserves and fishery profit: practical designs offer optimal solutions. Crow White, Bruce Kendall, Dave Siegel, and Chris Costello University of.
Coexistence with Stochastic Dispersal in a Nearshore Multi-Species Fishery Heather Berkley & Satoshi Mitarai.
A SCALING TOOL TO ACCOUNT FOR INHERENT STOCHASTICITY IN LARVAL DISPERSAL Mitarai S., Siegel D. A., Warner R.R., Kendall B.E., Gaines S.D., Costello C.J.
ROLE OF HEADLANDS IN LARVAL DISPERSAL Tim Chaffey, Satoshi Mitarai Preliminary results and research plan.
Brian Kinlan UC Santa Barbara Integral-difference model simulations of marine population genetics.
Populations: Variation in time and space Ruesink Lecture 6 Biology 356.
Citations 1.Poulain, P. M. and P. P. Niiler Statistical-Analysis of the Surface Circulation in the California Current System Using Satellite-Tracked.
458 Lumped population dynamics models Fish 458; Lecture 2.
Mary L. Frost Introduction The diversity-promoting effects of nonlinear dynamics in variable environments (1, 2) may be an important component of the maintenance.
Marine reserves and fishery profit: practical designs offer optimal solutions. Crow White, Bruce Kendall, Dave Siegel, and Chris Costello University of.
“Packet Model” Paper Detailed version of PNAS paper –Shows that stochasticity in larval dispersal is set by coastal eddies –Proposes “packet model” –Shows.
Stochastic Transport Generates Coexistence in a Nearshore Multi-Species Fishery Heather Berkley, Satoshi Mitarai, Bruce Kendall, David Siegel, Robert Warner.
Population Dynamics in a Stirred, not Mixed, Ocean Bruce Kendall, David Siegel, Christopher Costello, Stephen Gaines, Ray Hilborn, Robert Warner, Kraig.
Examining the interaction of density dependence and stochastic dispersal over several life history scenarios Heather Berkley Bruce Kendall David Siegel.
FISHING FOR PROFIT, NOT FISH: AN ECONOMIC ASSESSMENT OF MARINE RESERVE EFFECTS ON FISHERIES Crow White, Bruce Kendall, Dave Siegel, and Chris Costello.
By Rob Day, David Bardos, Fabrice Vinatier and Julien Sagiotto
Marine reserve spacing and fishery yield: practical designs offer optimal solutions. Crow White, Bruce Kendall, Dave Siegel, and Chris Costello University.
Scaling of Larval Transport in the Coastal Ocean Satoshi Mitarai, Dave Siegel, Kraig Winters Postdoctoral Researcher University of California, Santa Barbara.
Flow, Fish and Fishing: Building Spatial Fishing Scenarios Dave Siegel, James Watson, Chris Costello, Crow White, Satoshi Mitarai, Dan Kaffine, Will White,
SIMULATION SETUP Modeled after conditions found in the central coast of California (CalCOFI line 70) during a typical July Domain is unstructured in alongshore.
Inherent Uncertainties in Nearshore Fisheries: The Biocomplexity of Flow, Fish and Fishing Dave Siegel 1, Satoshi Mitarai 1, Crow White 1, Heather Berkley.
Scaling of larval dispersal in the coastal ocean Satoshi Mitarai Postdoctoral Researcher University of California, Santa Barbara.
Inherent Uncertainties in Nearshore Fisheries: The Biocomplexity of Flow, Fish and Fishing Dave Siegel 1, Satoshi Mitarai 1, Crow White 1, Heather Berkley.
Spatial Bioeconomics under Uncertainty (with Application) Christopher Costello* September, 2007 American Fisheries Society Annual Meeting San Francisco,
Stock-Recruit relationships in the F3 model Bruce Kendall July 2006.
Fishing in a stirred ocean: sustainable harvest can increase spatial variation in fish populations Heather Berkley Bruce Kendall, David Siegel, Christopher.
Spatial and Temporal Patterns in Modeling Marine Fisheries Heather Berkley.
Fishing in a stirred ocean: sustainable harvest can increase spatial variation in fish populations Heather Berkley Bruce Kendall David Siegel.
ROLE OF IRREGULAR COASTLINES IN LARVAL DISPERSAL Tim Chaffey, Satoshi Mitarai, Dave Siegel Results and research plan.
458 Meta-population models and movement Fish 458; Lecture 18.
Can Packet Larval Transport Create Favorable Conditions for the Storage Effect? Heather & Satoshi “Flow, Fish & Fishing,” UCSB Group Meeting Feb. 21, 2007.
Life Histories Chapter 12
FISH POPULATION DYNAMICS
Population of Ecology. Ecology Study of the interactions of organisms in their biotic and abiotic environments Organism  population  community  Ecosystem.
This WEEK: Lab: last 1/2 of manuscript due Lab VII Life Table for Human Pop Bring calculator! Will complete Homework 8 in lab Next WEEK: Homework 9 = Pop.
Chapter 52 Population Ecology. Population ecology - The study of population’s and their environment. Population – a group of individuals of a single species.
“IDEALIZED” WEST COAST SIMULATIONS Numerical domain Boundary conditions Forcings Wind stress: modeled as a Gaussian random process - Statistics (i.e.,
Implications of Differing Age Structure on Productivity of Snake River Steelhead Populations Timothy Copeland, Alan Byrne, and Brett Bowersox Idaho Department.
What’s next? Time averages Cumulative pop growth Stochastic sequences Spatial population dynamics Age from stage Integral projection models.
Harvesting and viability
Measuring and Modeling Population Change SBI4U. Demography The statistical study of the processes that change the size and density of a population through.
Flow, Fish and Fishing Dave Siegel, Chris Costello, Steve Gaines, Bruce Kendall, Satoshi Mitarai & Bob Warner [UCSB] Ray Hilborn [UW] Steve Polasky [UMn]
Spatial ecology I: metapopulations Bio 415/615. Questions 1. How can spatially isolated populations be ‘connected’? 2. What question does the Levins metapopulation.
Chapter 3: Ecological and Evolutionary Principles of Populations and communities.
Population Ecology I.Attributes of Populations II.Distributions III. Population Growth – change in size through time A. Calculating Growth Rates 1. Discrete.
Population Ecology. Population Def. a group of individuals of a __________ species living in the same area Characteristics of a popl’n 1)Size 2)Density.
Sources of Fish Decline Habitat disruption Breeding areas Larval development areas Bottom structure.
Hydrodynamic Connectivity in Marine Population Dynamics Satoshi Mitarai 1, David A. Siegel 1, Bruce E. Kendall 1, Robert R. Warner 1, Steven D. Gaines.
Current Oversights in Marine Reserve Design. MARINE RESERVE DATA BASE 81 studies, 102 measurements Halpern, in press.
Populations. What is a population? -a group of actively interacting and interbreeding individuals in space and time.
Limits of Populations. Questions for today: What is Population Dynamics? What is Population Dynamics? How does Population Distribution affect Population.
Characterizing population dynamics
Performance of small populations
Population Ecology
Population Dynamics Chapter 52.
Studies of Populations
“Bipartite” life cycle of benthic marine fishes with pelagic larvae
Unit 1, Part 1 Notes - Populations
Presentation transcript:

Examining the interaction of density dependence and stochastic dispersal over several life history scenarios Heather Berkley Bruce Kendall David Siegel

Main Question How does stochastic dispersal & demography interact to affect spatial & temporal variability in populations?

Characterizing the existing model Parameters that potentially impact variability in populations:  Type of density dependence: Recruitment rate depends on adult density  Mortality  Productivity  Dispersal Distance  Ndraw (number of draws from the kernel)

Adult abundance at location x during time-step n+1 # of adults harvested Natural mortality of un-harvested adults Fecundity Larval survival Larval dispersal Larval recruitment at x Number of larvae that successfully recruit to location x An integro-difference model describing coastal fish population dynamics:

Set Parameters We chose the following values:  Mortality: 0.5, based on lifespan of 2 years 0.05, based on lifespan of 20 years  Fixed kernel dispersal distance based on PLD: 70 km, based on PLD of 5 days 230 km, based on PLD of 50 days  Productivity (P 0 ) is calculated to give either monotonic or oscillating approach to stability  Density dependent term (c) is calculated to set carrying capacity to 100

Parameter Combinations MP0P0 cDispDStability long lifespan, PLD ~ 5 days, monotonic short lifespan, PLD ~ 5 days, monotonic long lifespan, PLD ~ 50 days, monotonic short lifespan, PLD ~ 50 days, monotonic X long lifespan, PLD ~ 5 days, oscillating short lifespan, PLD ~ 5 days, oscillating X long lifespan, PLD ~ 50 days, oscillating short lifespan, PLD ~ 50 days, oscillating

Model Settings & Calculations Domain:  Absorbing boundaries  3000 km, used only middle section  Patches = 5km Spatial variance calculated at last time step (100 yrs) over 300 patches Temporal variance calculated for last 50 years  Local: for each patch  Total Population: for whole population (all 300 patches) Autocorrelation (lag 1 only)  Spatial  Temporal Local Total Population Over a range of Ndraw values Values averaged over 200 simulations

Stochastic Dispersal Ndraw  For small values of Ndraw, each patch only sends out a few groups of larvae to other locations At the receiving patch, the time between receiving larvae groups can be very long For short-lived adults, natural adult mortality can drive the population extinct until it receives a new group of larvae  For large values of Ndraw, each patch is interacting with almost all other patches Receiving patches should get larvae from many other patches each year

Parameter Combination #4 Ndraw=20 Short-lived Long PLD distance (km)

Adult Population Ndraw=10  Long-Lived, Long PLD  Short-lived, Long PLD  Short-lived, Long PLD, oscillating distance (km)

Monotonic Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD Population Size

Oscillating Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD

Spatial Coefficient of Variation Monotonic Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD

Spatial Coefficient of Variation Oscillating Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD

Temporal Coefficient of Variation (local) Monotonic Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD

Temporal Coefficient of Variation (population) Monotonic Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD

Temporal Coefficient of Variation (local) Oscillating Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD

Temporal Coefficient of Variation (population) Oscillating Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD

Spatial Autocorrelation Monotonic Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD

Spatial Autocorrelation Oscillating Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD

Temporal Autocorrelation (local) Monotonic Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD

Temporal Autocorrelation (population) Monotonic Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD

Temporal Autocorrelation (local) Oscillating Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD

Temporal Autocorrelation (population) Oscillating Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD

Future Structure of the F 3 model Types of density dependence:  Recruitment rate depends on adult density  Production rate depends on adult density  Adult mortality depends on adult density  Recruitment rate depends on larval density Size & Age Structure  Increasing time to maturity  Increasing fecundity with age or size Adult movement Variability in habitat quality (spatial & temporal)

Next Steps Add other forms of density dependence Age/Size Structure Adult Movement Spatial/Temporal variability in habitat quality

Equations used to calculate parameters Non-Spatial model without harvest: P 0 = Productivity = Fecundity X Larval Survival At equilibrium (N t = K): For stability analysis:

Calculated Parameters Productivity (P 0 ) is calculated from value of M & by setting Eqn. for stability to monotonic (+0.5) or oscillating (-0.5) approach to stability Density dependent term (c) is calculated by setting carrying capacity equation to 100 and given values of M and P 0

Spatial Variance Monotonic Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD

Spatial Variance Oscillating Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD

Temporal Variance (local) Monotonic Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD

Temporal Variance (local) Oscillating Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD

Temporal Variance (population) Monotonic Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD

Temporal Variance (population) Oscillating Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD

Spatial Autocorrelation (run 2) Monotonic Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD

Spatial Autocorrelation (run 2) Oscillating Approach to Equilibrium: Long lived, short PLD Short lived, short PLD Long lived, long PLD Short lived, long PLD