Psy 8960, Spring ‘07 Gradient and Spin Echoes1 Echoes, gradients and dephasing Gradient echoSpin echo.

Slides:



Advertisements
Similar presentations
Receiver Bandwidth affects signal-to-noise ratio (SNR)
Advertisements

Fund BioImag : Echo formation and spatial encoding 1.What makes the magnetic resonance signal spatially dependent ? 2.How is the position of.
Fund BioImag : Echo formation and spatial encoding 1.What makes the magnetic resonance signal spatially dependent ? 2.How is the position of.
Principles of the MRI Signal Contrast Mechanisms MR Image Formation John VanMeter, Ph.D. Center for Functional and Molecular Imaging Georgetown University.
Contrast T1 weighted – (MPRAGE-anatomical) T2 weighted – (fmri)
Imaging Sequences part I
MRI Phillip W Patton, Ph.D..
Richard Wise FMRI Director +44(0)
BE 581 Lecture 3- Intro to MRI.
PHYSICS OF MAGNETIC RESONANCE
MR Sequences and Techniques
MR TRACKING METHODS Dr. Dan Gamliel, Dept. of Medical Physics,
Statistical Parametric Mapping
Fund BioImag : MRI contrast mechanisms 1.What is the mechanism of T 2 * weighted MRI ? BOLD fMRI 2.How are spin echoes generated ? 3.What are.
Basic Principles MRI related to Neuroimaging Xiaoping Hu Department of Biomedical Engineering Emory University/Georgia Tech
MRI. Magnetic Resonance 1.Principle first observed in Used for spectroscopy and imaging 3.Imaging techniques are a form of tomography, where slices.
Psy 8960, Fall ‘06 EPI, Part 11 Pulse sequences Nyquist ghost Chemical shift –FLASH –EPI.
Relaxation Exponential time constants T1 T2 T2*
FMRI: Biological Basis and Experiment Design Lecture 11: Distortion Field maps Bandwidth / pixel Calculations Dali. The Persistence of Memory, 1931.
FMRI: Biological Basis and Experiment Design Lecture 5: non-BOLD MRI Equilibrium and excitation Relaxation rates Image contrast –TE –TR.
FMRI: Biological Basis and Experiment Design Lecture 10: The Dreaded Drop-out Spin echo review Field maps Through-slice dephasing © Melissa Tillery
FMRI: Biological Basis and Experiment Design Lecture 14: Localization I Spin echo BOLD Experiment design 1 light year = 5,913,000,000,000 miles?
Psy 8960, Fall ‘06 Spin Echo, high field1 High Field and Spin Echo: the Minnesota story Preview: fMRI decision tree Why image at 7T?
Psy 8960, Spring ‘07 Inversion Recovery1 Exponential decay  = 30 ms.
EPI – Echo Planar Imaging Joakim Rydell
Basics of Magnetic Resonance Imaging
Steady-state magnetization
Psy 8960, Fall ‘06 Fourier transforms1 –1D: square wave –2D: k x and k y Spatial encoding with gradients Common artifacts Phase map of pineapple slice.
FMRI: Biological Basis and Experiment Design Lecture 7: Gradients and k-space FFT examples –Sampling and aliasing Gradient Gradient echo K-space
Magnetic Resonance Imaging Basic principles of MRI This lecture was taken from “Simply Physics” Click here to link to this site.
Resonance condition. Pulse A coil of wire placed around the X axis will provide a magnetic field along the X axis when a direct current is passed through.
Psy 8960, Fall ‘06 EPI, Part 2: variants1 Segmentation Partial Fourier Spin echo vs. gradient echo Inversion recovery Long vs. short TE.
Psy 8960, Spring ’07 Introduction to MRI1 Introduction to MRI: NMR Physics reminders –Nuclei and atoms –Electromagnetic spectrum and Radio Frequency –Magnets.
Psy 8960, Fall ‘06 Fieldmaps1 Fieldmaps and distortion Using fieldmaps to correct distortion Using fieldmaps to predict through-slice dephasing.
Medical Imaging Systems: MRI Image Formation
Magnetic Resonance Imaging 4
Principles of Magnetic Resonance
2012 spring fMRI: theory & practice
Medical Imaging Systems: MRI Image Formation
Basics of MRI.
Contrast Mechanism and Pulse Sequences Allen W. Song Brain Imaging and Analysis Center Duke University.
fMRI Methods Lecture2 – MRI Physics
Quiz In a 2D spin warp or FT MR scan, aliasing should only occur
Contrast Mechanism and Pulse Sequences
Statistical Parametric Mapping
Magnetic Resonance Imaging – Basic Principles –
Protons (hydrogen nuclei act like little magnets) MRI Collective Magnetic Moment of Protons (M 0 ) Each pixel is a glass of protons B 0 = 3T (not to scale)
Functional Brain Signal Processing: EEG & fMRI Lesson 11 Kaushik Majumdar Indian Statistical Institute Bangalore Center M.Tech.
MR Image Formation FMRI Graduate Course (NBIO 381, PSY 362)
MRI Physics: Spatial Encoding Anna Beaumont FRCR Part I Physics.
MRI: Contrast Mechanisms and Pulse Sequences
Spinning Nucleus Produces Magnetic Moment
Principles of MRI Physics and Engineering Allen W. Song Brain Imaging and Analysis Center Duke University.
Charged particle. Moving charge = current Associated magnetic field - B.
Parameters which can be “optimized” Functional Contrast Image signal to noise Hemodynamic Specificity Image quality (warping, dropout) Speed Resolution.
10 spring fMRI: theory & practice
FMRI data acquisition.
MRI Physics in a Nutshell Christian Schwarzbauer
Where Mt is the magnetization at time = t, the time after the 90o pulse, Mmax is the maximum magnetization at full recovery. At a time = one T1, the signal.
Bioengineering 280A Principles of Biomedical Imaging Fall Quarter 2005 MRI Lecture 5 Thomas Liu, BE280A, UCSD, Fall 2005.
Eduardo H. M. S. G. de Figueiredo, BSc, Arthur F. N. G
MRI Pulse Sequences: IR, EPI, PC, 2D and 3D
Magnetic Resonance Imaging
Image construction. Image construction. (A) Step 1: Slice selection. A slice-selecting gradient (GS) is applied at the same time as the excitatory radiofrequency.
How MRI Works By Wesley Eastridge, adapted from and with illustrations from The Basics of MRI by Joseph P. Hornak, Ph.D.
Pulse sequence diagrams show the benefits of parallel imaging for DWI
(4)ELECTRONIC SUPPORT SYSTEM
The echo time (TE) The echo time (TE) refers to the time between the application of the radiofrequency excitation pulse and the peak of the signal induced.
Pulse sequence diagram for a diffusion-weighted acquisition shows that 2 diffusion-sensitizing gradients (dark gray) are added to a spin-echo sequence,
T2 Relaxation Time T2 relaxation time is defined as the time needed to dephase up to 37% of the original value. T2 relaxation refers to the progressive.
Presentation transcript:

Psy 8960, Spring ‘07 Gradient and Spin Echoes1 Echoes, gradients and dephasing Gradient echoSpin echo

Psy 8960, Spring ‘07 Gradient and Spin Echoes2 Imaging gradients: gradient echo If the sample is a long pencil … A gradient (on the long axis) produces a distribution of frequencies (macroscopic)

Psy 8960, Spring ‘07 Gradient and Spin Echoes3 Imaging gradients: gradient echo If the sample is a long pencil … The opposite gradient produces the opposite distribution of frequencies

Psy 8960, Spring ‘07 Gradient and Spin Echoes4 Gradient echo pulse sequence Excitation pulseEcho S MTMT

Psy 8960, Spring ‘07 Gradient and Spin Echoes5 T 2 *: dephasing of spin isochromats Voxel (entire slide) = collection of isochromats Magnet field perturbation: distribution of frequencies (microscopic) time = 0

Psy 8960, Spring ‘07 Gradient and Spin Echoes6 T 2 *: dephasing of spin isochromats Range of resonant frequencies Decreased signal at echo (acquisition) time time = 30 ms

Psy 8960, Spring ‘07 Gradient and Spin Echoes7 T 2 *: intra-voxel dephasing due to field perturbation time Orientation of arrow indicates relative phase in rotating (128 MHz) reference frame.

Psy 8960, Spring ‘07 Gradient and Spin Echoes8 Spin Echo refocuses T 2 * dephasing Refocusing pulseExcitation pulseEcho S MTMT T2*T2* T2T2 Each isochromat gets shorter with time: T 2 decay

Psy 8960, Spring ‘07 Gradient and Spin Echoes9 Spin Echo: erasing magnetic field imperfections Imaging signal comes from protons on water molecules. Sensitive to macro- and microscopic variations in B 0. Hz Frequency map, zoomed in on lateral temporal cortex On resonance 100 Hz off resonance 250 Hz off resonance Air in auditory canals creates susceptibility-induced magnetic field gradients

Psy 8960, Spring ‘07 Gradient and Spin Echoes10 Spin Echo: erasing magnetic field imperfections Summing all spins through an axial slice creates rapid signal decay

Psy 8960, Spring ‘07 Gradient and Spin Echoes11 Spin Echo: erasing magnetic field imperfections Applying a 180 pulse at TE/2 refocuses the inhomogeneity-induced dephasing at TE t = 0 mst = TEt = TE/2

Psy 8960, Spring ‘07 Gradient and Spin Echoes12 SE EPI: reduction of through-slice dephasing Gradient echoSpin echo

Psy 8960, Spring ‘07 Gradient and Spin Echoes13 Parkes et al. 2005

Psy 8960, Spring ‘07 Gradient and Spin Echoes14 Traveling waves: V1

Psy 8960, Spring ‘07 Gradient and Spin Echoes15 Traveling waves

Psy 8960, Spring ‘07 Gradient and Spin Echoes16 Blurring & MTF