Real-time identification of cardiac substrate anomalies Author : Philippe Haldermans Promoters : dr. Ronald Westra dr. ir. Ralf Peeters dr. ir. Ralf Peeters.

Slides:



Advertisements
Similar presentations
Zhengyou Zhang Vision Technology Group Microsoft Research
Advertisements

Bayesian inference Lee Harrison York Neuroimaging Centre 01 / 05 / 2009.
P. Venkataraman Mechanical Engineering P. Venkataraman Rochester Institute of Technology DETC2012 – 70343: A Robust Technique for Lumped Parameter Inverse.
General Linear Model With correlated error terms  =  2 V ≠  2 I.
Lecture 13 L1 , L∞ Norm Problems and Linear Programming
Developable Surface Fitting to Point Clouds Martin Peternell Computer Aided Geometric Design 21(2004) Reporter: Xingwang Zhang June 19, 2005.
Pattern Recognition and Machine Learning
Wavefront-based models for inverse electrocardiography Alireza Ghodrati (Draeger Medical) Dana Brooks, Gilead Tadmor (Northeastern University) Rob MacLeod.
P. Venkataraman Mechanical Engineering P. Venkataraman Rochester Institute of Technology DETC2013 – 12269: Continuous Solution for Boundary Value Problems.
M/EEG forward problem & solutions Brussels 2011 SPM-M/EEG course January 2011 C. Phillips, Cyclotron Research Centre, ULg, Belgium.
Uncertainty Representation. Gaussian Distribution variance Standard deviation.
Lecture 9 Inexact Theories. Syllabus Lecture 01Describing Inverse Problems Lecture 02Probability and Measurement Error, Part 1 Lecture 03Probability and.
Some useful linear algebra. Linearly independent vectors span(V): span of vector space V is all linear combinations of vectors v i, i.e.
Statistical Image Modelling and Particle Physics Comments on talk by D.M. Titterington Glen Cowan RHUL Physics PHYSTAT05 Glen Cowan Royal Holloway, University.
Lecture 8 The Principle of Maximum Likelihood. Syllabus Lecture 01Describing Inverse Problems Lecture 02Probability and Measurement Error, Part 1 Lecture.
Bayesian kriging Instead of estimating the parameters, we put a prior distribution on them, and update the distribution using the data. Model: Matrix with.
Simple Bayesian Supervised Models Saskia Klein & Steffen Bollmann 1.
Algorithm Evaluation and Error Analysis class 7 Multiple View Geometry Comp Marc Pollefeys.
Rician Noise Removal in Diffusion Tensor MRI
THEORETICAL STUDY OF SOUND FIELD RECONSTRUCTION F.M. Fazi P.A. Nelson.
1 Chapter 2 Wave motion August 25,27 Harmonic waves 2.1 One-dimensional waves Wave: A disturbance of the medium, which propagates through the space, transporting.
Simulating Spatial Partial Differential Equations with Cellular Automata By Brian Strader Adviser: Dr. Keith Schubert Committee: Dr. George Georgiou Dr.
Linear Regression Andy Jacobson July 2006 Statistical Anecdotes: Do hospitals make you sick? Student’s story Etymology of “regression”
MTH 161: Introduction To Statistics
A finite element approach for modeling Diffusion equation Subha Srinivasan 10/30/09.
Probability and Measure September 2, Nonparametric Bayesian Fundamental Problem: Estimating Distribution from a collection of Data E. ( X a distribution-valued.
Parameter estimation. 2D homography Given a set of (x i,x i ’), compute H (x i ’=Hx i ) 3D to 2D camera projection Given a set of (X i,x i ), compute.
Computer Vision : CISC 4/689 Going Back a little Cameras.ppt.
Oslo Gardermoen Oslo N12 N10 N18 N20 N34 N32 N30 N40 N38 N36 N46 N44 N42 N12 N10 N18 N20 N34 N32 N30 N40 N38 N36 N46 N44 N42 GPR(44)GPR(46) GPR(47) GPR(45)
The Role of the Bidomain Model of Cardiac Tissue in the Dynamics of Phase Singularities Jianfeng Lv and Sima Setayeshgar Department of Physics, Indiana.
Geology 5670/6670 Inverse Theory 21 Jan 2015 © A.R. Lowry 2015 Read for Fri 23 Jan: Menke Ch 3 (39-68) Last time: Ordinary Least Squares Inversion Ordinary.
Modified Variational Iteration Method for Partial Differential Equations Using Ma’s Transformation SYED TAUSEEF MOHYUD-DIN.
An Introduction to Kalman Filtering by Arthur Pece
Overview of Optimization in Ag Economics Lecture 2.
Data Modeling Patrice Koehl Department of Biological Sciences National University of Singapore
The role of the bidomain model of cardiac tissue in the dynamics of phase singularities Jianfeng Lv and Sima Setayeshgar Department of Physics, Indiana.
Indirect imaging of stellar non-radial pulsations Svetlana V. Berdyugina University of Oulu, Finland Institute of Astronomy, ETH Zurich, Switzerland.
Modeling Electromagnetic Fields in Strongly Inhomogeneous Media
1 Methods in Image Analysis – Lecture 3 Fourier CMU Robotics Institute U. Pitt Bioengineering 2630 Spring Term, 2004 George Stetten, M.D., Ph.D.
Model Fusion and its Use in Earth Sciences R. Romero, O. Ochoa, A. A. Velasco, and V. Kreinovich Joint Annual Meeting NSF Division of Human Resource Development.
Geology 5670/6670 Inverse Theory 28 Jan 2015 © A.R. Lowry 2015 Read for Fri 30 Jan: Menke Ch 4 (69-88) Last time: Ordinary Least Squares: Uncertainty The.
Nonlinear regression Review of Linear Regression.
Regularization of energy-based representations Minimize total energy E p (u) + (1- )E d (u,d) E p (u) : Stabilizing function - a smoothness constraint.
Adjoint models: Theory ATM 569 Fovell Fall 2015 (See course notes, Chapter 15) 1.
Bayesian inference Lee Harrison York Neuroimaging Centre 23 / 10 / 2009.
Geology 5670/6670 Inverse Theory 4 Feb 2015 © A.R. Lowry 2015 Read for Fri 6 Feb: Menke Ch 4 (69-88) Last time: The Generalized Inverse The Generalized.
Using Neumann Series to Solve Inverse Problems in Imaging Christopher Kumar Anand.
Hybrid Bayesian Linearized Acoustic Inversion Methodology PhD in Petroleum Engineering Fernando Bordignon Introduction Seismic inversion.
Statistics 350 Lecture 2. Today Last Day: Section Today: Section 1.6 Homework #1: Chapter 1 Problems (page 33-38): 2, 5, 6, 7, 22, 26, 33, 34,
Statistics 350 Review. Today Today: Review Simple Linear Regression Simple linear regression model: Y i =  for i=1,2,…,n Distribution of errors.
Role of the Bidomain Model of Cardiac Tissue in the Dynamics of Phase Singularities Jianfeng Lv and Sima Setayeshgar Department of Physics, Indiana University,
Geology 5670/6670 Inverse Theory 6 Feb 2015 © A.R. Lowry 2015 Read for Mon 9 Feb: Menke Ch 5 (89-114) Last time: The Generalized Inverse; Damped LS The.
11/25/03 3D Model Acquisition by Tracking 2D Wireframes Presenter: Jing Han Shiau M. Brown, T. Drummond and R. Cipolla Department of Engineering University.
Terrain Reconstruction Method Based on Weighted Robust Linear Estimation Theory for Small Body Exploration Zhengshi Yu, Pingyuan Cui, and Shengying Zhu.
Chapter 2 Wave motion August 22,24 Harmonic waves
Reducing Photometric Redshift Uncertainties Through Galaxy Clustering
Review of Linear Algebra
Probability Theory and Parameter Estimation I
Ch3: Model Building through Regression
Application of the Proper Orthogonal Decomposition for Bayesian Estimation of flow parameters in porous medium Zbigniew Buliński*, Helcio R.B. Orlande**,
Parameter estimation class 5
Probabilistic Models for Linear Regression
Some useful linear algebra
Filtering and State Estimation: Basic Concepts
Does AVO Inversion Really Reveal Rock Properties?
Pattern Recognition and Machine Learning
Biointelligence Laboratory, Seoul National University
Integrated high-resolution tomography
Advanced deconvolution techniques and medical radiography
Yalchin Efendiev Texas A&M University
Presentation transcript:

Real-time identification of cardiac substrate anomalies Author : Philippe Haldermans Promoters : dr. Ronald Westra dr. ir. Ralf Peeters dr. ir. Ralf Peeters 13th September 2004

Contents  Motivation  Forward modelling  Inverse methods  Results  Conclusions

Motivation  Atrium fibrillation (AF) – cell triggers – wave maintenance by substrate anomalies  New spatial-temporal data  better image of wave propagation (movie) movie

Objective Can we develop a method that is able to identify substrate anomalies, using the new spatial-temporal data?

Forward modelling (1)  Biophysically detailed models + Luo-Rudy, Beeler-Reuter, … – Complicated for inverse method  Cellular automata + Simple and fast, especially for normal propagation – Absence of parameters for inverse estimation

Forward modelling (2)  Fitzhugh-Nagumo model – Partial differential equation – –

Forward modelling (3) –Discretized in time and space  Space : symmetric estimation  Time : normal estimation

Experiments (1)  Types of waves: – Planar – Spherical – Spiral  Different sorts of tissue: –Isotropic Anisotropic –Homogeneous Inhomogeneous

Experiments (2)  Refractory period  Re-entering waves –Spiral waves (spiral.avi) spiral.avi –Figure-8 reentry (figure8.avi) (figure8.avi)  Laws of physics –Rotations –Snellius’ law

Inverse methods  Rewriting equations  linear in the parameters  Iterative linear least squares estimation  Proof of usefulness – Robustness for rounding errors – Effect of noisy data

Results (1)  Simulated data: – Good estimation of the parameters – Method holds even with noisy data – Able to find anomalies (tissue) (demo) tissuedemotissuedemo  Data movies – Proved in theory  estimation works – Practical problems with matlab

Results (2)  Real data : – First dataset (movie) (movie)  shows normal propagation  method finds smooth surface (tissue) (tissue) –Second dataset (movie) (movie)  fibrillatory propagation  no anomalies in the conductivity (tissue) (tissue)  example of other problem : cell triggering?

Other inverse methods (1)  Bayesian approach – estimation of the uncertainty – groups of solutions – prior distribution & likelihood function  posterior distribution – can be used as first estimation for other methods

Other inverse methods (2)  Regularization – Moore-Penrose pseudo-inverse  Problems with : –Small singular values + noisy data  Possible solutions : – Truncated singular value decomposition – Tikhonov regularization

Conclusions  Identify spatial anomalies in the conductivity  Fitzhugh-Nagumo  Realistic properties  Estimation method works + is robust  Real data – able to give conductivity – these examples show no problems in the conductivity

Recommendations (1)  Other forward model – Biologically more detailled – Other properties  Different inverse method – Bayesian, regularization, … – Combination: least squares with Bayesian

Recommendations (2)  Real data – More datasets – More information about the data  Combination with the spatial-temporal data measurement  real-time identification