T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Searching and Accessing Full Text Journal Articles Nancy Clark, Director of Medical Informatics Martin Wood, Director, Maguire Medical Library FSU College of Medicine Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Objectives for Session Learners will – Do PubMed search using primary functions on web – Locate full articles from PubMed search – Link out to full text articles within resources, mobile and online – Consider other ways to find journal articles (mobile devices, web sites…) – Save searches in NCBI Summer/Fall 20142

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Handouts PowerPoint Worksheet for activity Evaluations – Please complete Pre- Workshop Assessment Summer/Fall 20143

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Tutorials for PubMed Summer/Fall Link to PubMed Tutorials

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care What is MEDLINE? Database of bio-medical journals (medical, dental, nursing, veterinary, …) Old Index Medicus database Service of National Library of Medicine (NLM) 5,271 biomedical journals, most are peer reviewed Nearly 18+ million citations (around 70,000 new/month) Back to 1860s (primarily back to 1950s) Summer/Fall 20145

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 6 What is MEDLINE? Articles are indexed by Real People. Terms are assigned that come from a Controlled Vocabulary (Thesaurus) called MeSH (Medical Subject Headings). MeSH includes sets of subheadings that apply to each term and uses markers to indicate which terms reflect the main focus of the article. Summer/Fall 20146

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Where to Search MEDLINE? Pubmed (NLM interface) OVID MD Consult Merck Medicus Medscape Links to – Full text journal articles – Books – EBM databases Summer/Fall 20147

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Goal of Journal Search A Few Good Articles Summer/Fall Full text in as few clicks as possible

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Go to PubMed (EZProxy) Under MedResources List Click on Pubmed Summer/Fall 20149

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Alternate Option Use Search Engine Box to start Pubmed Search Type in Terms and start Search Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Get a Free NCBI Account. Why? Alerting service – Sends TOC of latest journals – Sends results of searches updates Save searches Save collections of articles Filters which break down your results for you Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care First search of the evening: Author search Use initial(s) most frequently used by author After 2002, full names (when included in the journal itself) may be used May search multiple authors on one search line Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Example of author search: Search for articles by Hurt MM and click the “Search” button Summer/Fall Hurt MM

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Let’s take a look at one article Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall Abstract View

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care MeSH Terms Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care MEDLINE View Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall Direct Link to Full Text:

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Do your own author search exercise Lawrence Weed (LL Weed) Nir Menachemi Robert Brooks (RG Brooks) Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care PubMed tutorial 1 minute tutorial on a simple subject search Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Subject Search Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care PubMed MEDLINE Filter (Limit) Results Left Side Filter by Article Type Text Availability Publication date Species Type research Language … 24 Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Limits Results Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall Details – scroll down

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Search Strategies Limit search – By type of article – By date – By age group – By language Phrases in quotes: “focal nodular hyperplasia” AND, OR, NOT, parentheses Summer/Fall “medication errors” AND “quality improvement” NOT (ambulatory OR “nursing home”)

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Types of Articles Review Articles Editorials Letters Meta-Analysis – Systematic reviews Clinical Guidelines Original Research – Case Studies – Case Control – Time Series – Cross sectional – Cohort – Control trials – Randomized Control Trials Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Advanced Search Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Using Your Search History Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall Put a reference in the Clipboard

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Clipboard As you search Add articles to Clipboard Collect all the good articles there Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Clipboard Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Follow the link to the article Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care When you see this… Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care When the pretty red button isn’t there…. Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Identify the Full Journal Title, Issue and Article Title Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Finding Full Text Articles Pubmed Linked to full text? No… 1.Search Google Scholar for the article title. 2.Look for journal in Medical E-Journals list. Journal not listed…Medical E-Journals 3.FSU E-Journals from library webpage. In electronic format? No...FSU E-Journals 4.Interlibrary loans for titles not owned by FSU: Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Google Scholar Searches Pubmed, some of our content, links to full text In Search Engines box Search for article title Click on Title or Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Saving Articles Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall Find FSU

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care STEP 2: Look for Journal in Medical E-Journals List In electronic less than 12~ years Each journal different Digitizing old issues slowly 45 Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care STEP 2: or Search E-Journal Titles 46 If there is no FSU icon, there are other options: 1.Search E-Journal Titles for the journal name Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care All FSU E-Journals Under Resources Expand E-Journals Click on All FSU E-Journals Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care FSU Libraries E-Journals Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Interlibrary Loan Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Other Journal Options Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Pubmed Mobile Interface Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Interesting New Tool: knalij.com 52Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care MEDLINE Search in uCentral iPad Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Browzine (Tablets Only) Journal e-reader Select most FSU COM Journals to read Look like journals Alert you to new articles Allows saving articles to read offline 55Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Follow Links to Articles in Dynamed In your default browser, Open the Medical Library Log into EZProxy Open Pubmed Minimize In another tab, open Dynamed. Links will take to Pubmed with buttons. Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Exercise Write a clinical question What kinds of articles do you want to answer this question Locate first 10 articles on search Find the full text articles Print one of the full text articles or the articles to yourself Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Open exercises: topics from group Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Review of great Pubmed features Details Limits/filters Advanced Search – History (combine searches) Related articles View in Abstract View to find full article Use NCBI to save searches Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Using NCBI Register and get a Username and Password 61 Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Why get NCBI Account? Save searches Save citations in My Bibliography Automatically update and search results from your saved searches Filter search results Highlighting search terms 62Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 63Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care My NCBI 64Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Customize My NCBI Tutorials: Saving Searches Saving References Customizing the Filters Highlighting Search Terms Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 66 My NCBI – Saving a Search Develop a search. Click on ‘Save Search’. April 29, 2008 Medical Informatics Seminar Session 6 66 Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 67 My NCBI – Saving a Search Give name and Save Complete form for notification ‘My NCBI’ puts the search in your list. Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care April 29, 2008 Medical Informatics Seminar Session 6 68 My NCBI – Saving References (1) Develop a search. Check the references you want to save. Click on ‘Send To’ and select ‘Clipboard’. 68 Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 69 My NCBI – Saving References (2) Go to the ‘Clipboard’ Click on ‘Send To’ and select Collections. Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 70 My NCBI – Saving References (3) Tell My NCBI what to call the collection Or Append to an existing collection April 29, 2008 Medical Informatics Seminar Session 6 70 Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care My NCBI – Saving References (4) To see the collection or saved search, click on ‘My NCBI’ > Collections Can download collections into a reference manager such as EndNote or RefWorks. Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 72 My NCBI – Customizing the Filters 1.Click on ‘My NCBI’ 2.‘Manage Filters’ Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 73 My NCBI – Customizing the Filters Select from Popular, or Search in Properties. Create a Custom Query Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 74 My NCBI – Highlighting Search Terms Click on ‘NCBI Site Preferences’. Click on ‘Highlighting’ Pick colors Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Have Journal Contents Sent (1) 1.Main Pubmed Page: Journals in NCBI Databases 2.Enter a general subject term, e.g. “New England Journal”, then ‘Go’. 3.Click on a journal title to get information about that journal. 4.Check Journal and Add to Search builder 75Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 76Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 77 Have Journal Contents Sent (2) 5.Click on ‘Search PubMed’. 6.Click on ‘Save Search’, name it, and set up as earlier. 7.You will be notified when new articles are published in these journals. Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 78 Links to Other NCBI Databases NCBI has other databases that link to PubMed. (examples: CoreNucleotide, Gene, HomoloGene, Protein, Protein) 78 Summer/Fall 2014

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summary Use Pubmed to Search for Articles on your topics, My NCBI to manage Link through Dynamed or uCentral MEDLINE search Use red FSU button to find articles If no button: Google Scholar > eJournals list > FSU Journals > Interlibrary loan Any journal article you need, we will get Summer/Fall

T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care The End Practice Call or us for individual help Summer/Fall