Materials and methods  Population 83 eels treated with salmon pituitary extract to induce ovarian maturation  Ultrasound scans At week 7 and week 11.

Slides:



Advertisements
Similar presentations
SHREYAS PARNERKAR. Motivation Texture analysis is important in many applications of computer image analysis for classification or segmentation of images.
Advertisements

Description of the enzymatic browning in avocado slice using GLCM image texture Stefany Cárdenas, Roberto Quevedo*, Emir Valencia and José Miguel Bastías.
Lec 12: Rapid Bioassessment Protocols (RBP’s)
A Robust Pedestrian Detection Approach Based on Shapelet Feature and Haar Detector Ensembles Wentao Yao, Zhidong Deng TSINGHUA SCIENCE AND TECHNOLOGY ISSNl.
Chapter 1: Introduction to Pattern Recognition
Three-dimensional co-occurrence matrices & Gabor filters: Current progress Gray-level co-occurrence matrices Carl Philips Gabor filters Daniel Li Supervisor:
Pattern Recognition Topic 1: Principle Component Analysis Shapiro chap
Copyright © 2008 Society for Heart Attack Prevention and Eradication. All Rights Reserved. Characterization of 3D Echo-Morphology of Carotid Atherosclerotic.
Caudate Shape Discrimination in Schizophrenia Using Template-free Non-parametric Tests Y. Sampath K. Vetsa 1, Martin Styner 1, Stephen M. Pizer 1, Jeffrey.
Redaction: redaction: PANAKOS ANDREAS. An Interactive Tool for Color Segmentation. An Interactive Tool for Color Segmentation. What is color segmentation?
Biomedical Image Analysis and Machine Learning BMI 731 Winter 2005 Kun Huang Department of Biomedical Informatics Ohio State University.
Gender Competency Training for Medical Educators 28 th of April 2003 Evidence of gender difference and its clinical significance Ann-Maree Nobelius Faculty.
INTRODUCTION Problem: Damage condition of residential areas are more concerned than that of natural areas in post-hurricane damage assessment. Recognition.
Are We Really Training Dentists to Treat Patients with Special Needs? Author: Timothy B. Followell, DMD, MS Institutions: The Ohio State University, Nationwide.
Entropy and some applications in image processing Neucimar J. Leite Institute of Computing
Image Pattern Recognition The identification of animal species through the classification of hair patterns using image pattern recognition: A case study.
New Segmentation Methods Advisor : 丁建均 Jian-Jiun Ding Presenter : 蔡佳豪 Chia-Hao Tsai Date: Digital Image and Signal Processing Lab Graduate Institute.
Graphite 2004 Statistical Synthesis of Facial Expressions for the Portrayal of Emotion Lisa Gralewski Bristol University United Kingdom
Texture analysis Team 5 Alexandra Bulgaru Justyna Jastrzebska Ulrich Leischner Vjekoslav Levacic Güray Tonguç.
TRI science addiction USING PERFORMANCE AND OUTCOME MEASURES Mady Chalk, Ph.D. Treatment Research Institute Summit on Performance and Outcome Measurement.
Impact of activation and subsequent antimicrobial treatment of dormant endometrial streptococci in the Thoroughbred problem mare – a descriptive field.
This research project has been co-financed by the European Union (European Regional Development Fund- ERDF) and Greek national funds through the Operational.
1 A Compact Feature Representation and Image Indexing in Content- Based Image Retrieval A presentation by Gita Das PhD Candidate 29 Nov 2005 Supervisor:
November 30, PATTERN RECOGNITION. November 30, TEXTURE CLASSIFICATION PROJECT Characterize each texture so as to differentiate it from one.
A Fast and Scalable Nearest Neighbor Based Classification Taufik Abidin and William Perrizo Department of Computer Science North Dakota State University.
WEEK4 RESEARCH Amari Lewis Aidean Sharghi. PREPARING THE DATASET  Cars – 83 samples  3 images for each sample when x=0  7 images for each sample when.
2D-LDA: A statistical linear discriminant analysis for image matrix
Developing outcome prediction models for acute intracerebral hemorrhage patients: evaluation of a Support Vector Machine based method A. Jakab 1, L. Lánczi.
Fast Comprehensive Planner for Fully Observable Nondeterministic Problems Andres Calderon Jaramillo – Faculty Advisor: Dr. Jicheng Fu Department of Computer.
Cod Reproductive Ecology: Effect of dietary fatty acids on ovarian maturation, spawning time and quality of eggs and larvae. Maria C. Røjbek, PhD student,
LIVING THINGS.
Use of Java for Demonstration of Color Science Concepts Presentation of an MS Project, submitted to The Faculty of the Computer Science Department, in.
TUMOR BURDEN ANALYSIS ON CT BY AUTOMATED LIVER AND TUMOR SEGMENTATION RAMSHEEJA.RR Roll : No 19 Guide SREERAJ.R ( Head Of Department, CSE)
1 A latent information function to extend domain attributes to improve the accuracy of small-data-set forecasting Reporter : Zhao-Wei Luo Che-Jung Chang,Der-Chiang.
Evaluation of an Automatic Algorithm Based on Kernel Principal Component Analysis for Segmentation of the Bladder and Prostate in CT Scans Siqi Chen and.
Date of download: 6/3/2016 Copyright © 2016 SPIE. All rights reserved. Flowchart showing different modules of our methodology. In step 1, registration.
Workshop: Receiver performance of mobile telephones Needs to be addressed Per Christensen Head of Division Danish Business Authority 10 April 2014.
Date of download: 6/28/2016 Copyright © 2016 SPIE. All rights reserved. The two- to five-month follow-up image for four patients in our study. The solid.
Multiple Organ detection in CT Volumes Using Random Forests
Results and discussion
Principal Component Analysis (PCA)
Comparative Study of Myocardium Tissue Based on Gradient Features
Figure 1. Representative example of the pattern of oxygen consumption for assessment of mitochondrial function. The dashed line represents values from.
Author : Sang Hwa Lee, Junyeong Choi, and Jong-Il Park
In Search of the Optimal Set of Indicators when Classifying Histopathological Images Catalin Stoean University of Craiova, Romania
IMAGE PROCESSING RECOGNITION AND CLASSIFICATION
CLASSIFICATION OF TUMOR HISTOPATHOLOGY VIA SPARSE FEATURE LEARNING Nandita M. Nayak1, Hang Chang1, Alexander Borowsky2, Paul Spellman3 and Bahram Parvin1.
Efficient Image Classification on Vertically Decomposed Data
Monitoring and Evaluation Systems for NARS Organisations in Papua New Guinea Day 2. Session 6. Developing indicators.
Temperature as a predictor of fouling and diarrhea in slaughter pigs
Objectives Methods Results Conclusion
A New Classification Mechanism for Retinal Images
Ezzatollah Fathi1, Raheleh Farahzadi 2, *, Najmeh Sheikhzadeh3
Low Dimensionality in Gene Expression Data Enables the Accurate Extraction of Transcriptional Programs from Shallow Sequencing  Graham Heimberg, Rajat.
Texture Classification of Normal Tissues in Computed Tomography
Textural Features for Image Classification An introduction
A Fast and Scalable Nearest Neighbor Based Classification
Ying Dai Faculty of software and information science,
Window of implantation transcriptomic stratification reveals different endometrial subsignatures associated with live birth and biochemical pregnancy 
Region and Shape Extraction
Fluorescence-stained images and respective bright-field images of mouse spleen tissue sections area investigated using Raman spectroscopy. Fluorescence-stained.
Marine Science in the News
There is significant unexplained inter-cycle variation in ovarian performance during IVF treatment Thanos Papathanasiou, Nausheen Mawal, Phil Snell. Bourn.
Volume 3, Issue 1, Pages (January 2010)
Using Association Rules as Texture features
Figure 1. (A) Baseline contrast-enhanced CT scan of melanoma patient presenting with metastases in the liver and lymph ... Figure 1. (A) Baseline contrast-enhanced.
Number of patients treated at clinics that followed up fewer than 10 patients (2013–2016) or 20 patients (2012) and proportion of patients followed up.
Typical images of a patient without brain metastases derived via automatic segmentation software. Typical images of a patient without brain metastases.
Fig. 2 The outcome of plant-pathogen interaction is associated with the initial soil microbiome composition and functioning. The outcome of plant-pathogen.
Fig. 1 Epigenomic and genomic variations between dwarf and normal whitefish species and their reciprocal hybrids. Epigenomic and genomic variations between.
Presentation transcript:

Materials and methods  Population 83 eels treated with salmon pituitary extract to induce ovarian maturation  Ultrasound scans At week 7 and week 11  Texture analysis Gray-level co-ocurrence matrices ab Principal Component Analysis (PCA)  Classifcation Based on histology of ovaries: Non, slow or fast responder Figure 2. Sampling. Ultrasound images were recorded using a portable ultrasound machine coupled with a 18 MHz transducer. Figure 5. Gray-level co-occurrence matrices for the region of interest in figure 4. Figure 3. Original ultrasound image of an ovary from Anguilla anguilla. Figure 4. Segmentation of image from figure 3. The area of interest is shown in green. Results  It was possible to identify the ovaries and measure the cross-sectional area in all of the eels.  Texture is clearly associated to increasing size, which represents response to treatment.  The first three Principal Components explain 78,44 per cent of the variation in texture analysis of images from the later scan, i.e. at 11 weeks of therapy. Figure 6. Principal Component Analysis. The cross-sectional area is indicated by color. Dark blue represents the smallest size, red is the largest. Area is clearly affecting the texture. Anna V. Müller 1, José M. Amigo 2, Fintan J. McEvoy 3, Sebastian N. Politis 4, Jonna Tomkiewicz 5 Corresponding author: Anna V. Müller, phone ,3 Department of Veterinary Clinical and Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, Frederiksberg, Denmark 2 Department of Food Science, Quality and Technology, Faculty of Science, University of Copenhagen, Frederiksberg, Denmark 4,5 National Institute of Aquatic Resources, Technical University of Denmark, Charlottenlund, Denmark DEPARTMENT OF VETERINARY CLINICAL AND ANIMAL SCIENCES UNIVERSITY OF COPENHAGEN Using ultrasound in monitoring induced ovarian maturation in the European eel (Anguilla anguilla) Information available from ultrasound images includes tissue area, volume and texture. Texture analysis refers to the quantification of image features perceived as textural to the observer. Texture analysis is widely used in medical imaging and is performed in two main steps: 1)Calculation of several textural attributes that describe the texture numerically 2)Use of the computed texture features to train and evaluate a classifier Figure 1. The life cycle of A. Anguilla. There is an urging need for a sustainable eel production, including captive reproduction of the European eel. Image from References cited a Gotlieb, C. C. and H. E. Kreyszig (1990). "Texture Descriptors Based on Co- occurrence Matrices." Computer Vision, Graphics, and Image Processing 51: b Haralick, R. M., et al. (1973). "Textural Features for Image Classification." IEEE Transactions on Systems, Man and Cybernetics SCM-3(6): Main target The European eel (Anguilla anguilla) is an endangered species. Eels have a highly complex life cycle, and they do not breed in captivity. The main problems in captive eel reproduction include poor responsiveness to hormonal treatment, limiting egg production, quality and embryonic developmental competence. The long-term aim of this study is to fully understand the reproductive capacity of the species in captivity. DTU May Conclusion Ultrasound is an efficient tool in monitoring the size of the ovaries in A. anguilla. The ovarian texture is not significantly different between different groups at an early stage of treatment.