Cloning a DNA segment from lambda bacteriophage Recombinant DNA technology Allows study of the structure & function of a single protein coding gene in.

Slides:



Advertisements
Similar presentations
This presentation was originally prepared by C. William Birky, Jr. Department of Ecology and Evolutionary Biology The University of Arizona It may be used.
Advertisements

Recombinant DNA technology
Dolly the sheep ( ) 1. Animal and human cloning 2. Gene cloning.
Bacterial Transformation
Recombinant DNA and Cloning Riyanda N G (10198) Vina E A (10221) Arini N (10268) Suluh N (10302)
Recombinant DNA Introduction to Recombinant DNA technology
Molecular Cloning Biology 20L Spring Overview of Molecular Cloning Restriction digest of plasmid pUC19 and phage –GOAL: Linear pUC19 DNA and several.
Cloning:Recombinant DNA
MCB 130L Lecture 1: DNA.
MCB 130L Lecture 1 1. How to get the most from your time in lab 2. Recombinant DNA 3. Tips on giving a Powerpoint talk.
Gene Cloning Techniques for gene cloning enable scientists to prepare multiple identical copies of gene-sized pieces of DNA. Most methods for cloning pieces.
Cloning into Plasmids Restriction Fragment Cloning & PCR Cloning by the Topo TA™ Method.
2nd lab competent cells formation and transformation of competent cells with DNA. BCH 462 [practical]
7.1 Techniques for Producing and Analyzing DNA SBI4UP MRS. FRANKLIN.
Chapter 20~DNA Technology & Genomics. Who am I? Recombinant DNA n Def: DNA in which genes from 2 different sources are linked n Genetic engineering:
The Clone Age Human Genome Project Recombinant DNA Gel Electrophoresis DNA fingerprints
Restriction enzymes (endonucleases)
Biotechnology.
Genomic walking (1) To start, you need: -the DNA sequence of a small region of the chromosome -An adaptor: a small piece of DNA, nucleotides long.
1 Genetics Faculty of Agriculture Instructor: Dr. Jihad Abdallah Topic 13:Recombinant DNA Technology.
Restriction Enzymes Enzymes that CUT
Ms. Gaynor Honors Genetics Biotechnology and the Use of Bacteria.
Chapter 20 Notes: DNA Technology. Understanding & Manipulating Genomes 1995: sequencing of the first complete genome (bacteria) 2003: sequencing of the.
Making Recombinant DNA DNA structure and Plasmids DNA Restriction and Ligation
Technological Solutions. In 1977 Sanger et al. were able to work out the complete nucleotide sequence in a virus – (Phage 0X174) This breakthrough allowed.
DNA Cloning and PCR.
Cell-based DNA Cloning
Genetic Technologies Manipulating & Cloning DNA.
Genetics 6: Techniques for Producing and Analyzing DNA.
PHARMACOBIOTECHNOLOGY.  Recombinant DNA (rDNA) is constructed outside the living cell using enzymes called “restriction enzymes” to cut DNA at specific.
WSSP-14 Chapter 3 Analyzing DNA –Restriction Digests © 2014 WSSP.
Lecture # 04 Cloning Vectors.
GENETIC RECOMBINATION By Dr. Nessrin Ghazi AL-Abdallat Lecturer of Microbiology.
DNA Science. Restriction Digest Restriction Digestion is the process of cutting DNA molecules into smaller pieces with special enzymes called Restriction.
BIOTECHNOLOGY DNA is now being easily manipulated. Molecular biologists analyze and alter genes and their respective proteins. Recombinant DNA is DNA from.
Molecular Cloning.
8.1 - Manipulating & Cloning DNA
Genetic Engineering/ Recombinant DNA Technology
Chapter 20: Part 1 DNA Cloning and Plasmids
A Molecular Toolkit AP Biology Fall The Scissors: Restriction Enzymes  Bacteria possess restriction enzymes whose usual function is to cut apart.
Chapter 9 Genetic engineering. Deliberate manipulation of genes in an organism. Done in a lab by scientists Therapeutic substances such as human insulin.
SBI 4U December 2012 Manipulating & Cloning DNA. Introduction Insulin, diabetes and genetic engineering Genetic engineering: the intentional production.
Steps to Recombinant DNA 1) Isolate the foreign DNA fragment 2) Attach DNA fragment to a “vehicle” called a Vector 3) Transfer the vector into a host.
Green with envy?? Jelly fish “GFP” Transformed vertebrates.
Copyright © 2005 Pearson Education, Inc. publishing as Benjamin Cummings Using Restriction Enzymes to Make Recombinant DNA Bacteria and Archaea have evolved.
Chapter 9-1: Manipulating DNA Chapter 9.4: Genetic Engineering “Miracles of genetic engineering”
Restriction enzymes Are found in bacteria and are used to cut up DNA from a virus that might enter and take over the bacteria. They cut at specific sequences.
Cloning of a PCR Amplified Gene PPT 2. About Plasmids The plasmid pUC19 used for this experiment is derived from the pUC series. It has a single recognition.
Biotechnology Made up of 3 technologies: Bioprocess technology: when microorganisms are provided with nutrients and advantageous conditions, they perform.
Lab 6b Working with DNA.
4/26/2010 BIOTECHNOLOGY.
BIOTECHNOLOGY DNA Technology.
Gene Cloning Techniques for gene cloning enable scientists to prepare multiple identical copies of gene-sized pieces of DNA. Most methods for cloning pieces.
Bacterial Transformation
Recombinant DNA (DNA Cloning)
Genetic Research and Biotechnology Recombinant technology
Jared Lieser Cell Physiology Fall 2003
Genetic Research and Biotechnology Recombinant technology
DNA Technology Now it gets real…..
Gene Isolation and Manipulation
Biotechnology: Part 1 DNA Cloning, Restriction Enzymes and Plasmids
Material for Quiz 5: Chapter 8
Presentation Topic Cloning Vector and its Types Presented By
Chapter 9 Genetic engineering.
CHAPTER 20 DNA TECHNOLOGY.
Restriction Endonuclease
Cloning a DNA segment from bacteriophage
Transgenic Organisms Ms. Cuthrell.
Biotechnological Tools and Techniques
Cloning a DNA segment from lambda bacteriophage
Presentation transcript:

Cloning a DNA segment from lambda bacteriophage Recombinant DNA technology Allows study of the structure & function of a single protein coding gene in purified form Allows amplification and isolation of specific genes using simple procedures (usually involves help of bacterial cells and plasmids) Trying to purify a specific gene from cellular DNA would require a magnitude of purification & lots of starting material

Cloning a DNA segment from lambda bacteriophage

Recombinant DNA technology First recombinant protein used as drug - insulin from E.coli (1982)

Cloning a DNA segment from lambda bacteriophage Recombinant DNA technology To isolate segment of DNA to be cloned usually need to cleave it out of larger piece of DNA (or can PCR amplify) How do scientists do this? Use RESTRICTION ENDONUCLEASES RESTRICTION ENDONUCLEASES - protein enzymes that cleave the phosphodiester bonds that connect the nucleotide units in DNA or RNA at very SPECIFIC sites These enzymes are mainly produced by bacteria where they degrade invading foreign DNA; they have been purified from these sources and are now available commercially (300 RE available) Most restriction enzymes recognize a specific sequence of 4-6 nucleotides in DNA and each will cut the DNA into discrete pieces known as restriction fragments If a segment of DNA has more than 1 restriction site for the same enzyme, those sites are usually base pairs apart so that the restriction fragments are >100 bp long

Cloning a DNA segment from lambda bacteriophage Recombinant DNA technology Cohesive ends very important in recombinant DNA procedures because it allows two DNA fragments to be linked together by complementary base pairing at their ends

Cloning a DNA segment from lambda bacteriophage Recombinant DNA technology Part 1 of lab Digestion of lambda bacteriophage DNA with EcoRI Digestion of pUC18 plasmid DNA with EcoRI Other facts about restriction endonucleases amount of enzyme usually given in units of activity 1U is usually amount of enzyme needed to digest 1 µg of phage DNA in 1 hour at 37 ˚C in correct buffer just like all enzymes, RE have optimal reaction conditions (pH, buffer-ionic strength, temperature) EcoRI has a preference for buffers with high ionic strength (100 mM NaCl, 10 mM MgCl 2, 50 mM Tris-HCl pH 8) enzymes come from company in a concentrated form, stored at -20 ˚C in buffer with 50% glycerol reason for glycerol storage - does not freeze freeze-thaw BAD for protein enzymes DO NOT CONTAMINATE ENZYME STOCK TUBES!!!! Heat inactivate restriction enzyme (70 ˚C) Ligate cleaved fragments to each other

Cloning a DNA segment from lambda bacteriophage DNA ligation into plasmid Ligate small DNA fragments into plasmid DNA Plasmid has single, unique EcoRI site

Cloning a DNA segment from lambda bacteriophage DNA ligation into plasmid Ligate small DNA fragments into plasmid DNA Lambda bacteriophage has many EcoRI sites Restriction map of lambda DNA - EcoRI 21, ,226 Sizes of restriction fragments Position of EcoRI restriction sites 26,10431,74739,16844,972

Cloning a DNA segment from lambda bacteriophage DNA ligation into plasmid Ligate small DNA fragments into plasmid DNA DNA was cut with EcoRI and pUC plasmid has been cut with EcoRI

Cloning a DNA segment from lambda bacteriophage DNA ligation into plasmid Ligation by DNA Ligase - in cell, ligase used in DNA replication, repair, recombination T4 DNA Ligase - isolated from T4 phage infected E.coli (requires Mg 2+ and ATP)

Cloning a DNA segment from lambda bacteriophage DNA ligation into plasmid Ligation ATP Positively charged