T HE E FFECT OF THE BAF C HROMATIN R EGULATOR IN H EART V ALVE M ATURATION OF M US M USCULUS Kelsey Ward Kryn Stankunas, P.I. Brynn Simek, Mentor.

Slides:



Advertisements
Similar presentations
Problem #1 X H = Chromosome with allele for Normal Blood Clotting X h = Chromosome with allele for Hemophilia Y = Chromosome without an allele for blood.
Advertisements

Shelley Berger The Wistar Institute University of Pennsylvania Overview of Histone Variants Bio 483 October 9, 2012 Shelley Berger Biology; CDB; Genetics.
Investigation Of Cell-Adhesion Molecules In Prostate Cancer Progression Abstract. Lakshana Sreenivasan 4,5, Edward Abril 4,5, Kathleen McDaniel 4,5, Raymond.
Day 1 In rabbits the allele for black coat color (B) is dominant over the allele for brown coat (b). What is the genotype ratio and phenotype ratio from.
Tissue Submission All tissue submitted to the core should be accurately described on both form and vial. We can process, embedding and sectioning without.
3-D Sections. Lab 25 – Thinking About Microscopic Images.
Review of Mendelian Genetics and Population Genetics Prep for lab tomorrow: Chapter 5.
Chromatin Remodeling Review:. Crystal structure of a nucleosomal core particle.
Evolution of Populations
Shiqiu Li Dr. Scott Stewart Stankunas Lab UO SPUR 2012.
An efficient and rapid method for DNA extraction from formalin fixed and paraffin embedded tissues suitable for analysis by polymerase chain reaction (PCR).
MCB 317 Genetics and Genomics MCB 317 Topic 10, part 4 A Story of Transcription.
Unit 4, Day 6 Genetics & Human Development W/R, Jan 30 th -31 st (Block, 100 min)
Introduction to Histology Tissue processing and Microscope
The Process Of Molecular Cytology: Embedding and Sectioning Natasha Williams Dr. Katia Manova Zuckerman Research Building/ MSKCC.
C ONGENITAL H EART D EFECTS By: Victoria Lund. W HAT ARE CONGENITAL H EART DEFECTS ? They are problems with the heart that are present at birth. They.
Histology Techniques CLS 322
BRG-1 in Cancer BRG-1 is an ATPase subunit of the SWI/SNF class of chromatin remodeling complexes It has been found mutated in a number of cancer cell.
A kinase anchor protein 200 Why chose Akap200? In situ Hybridization. Autophagic Vacuoles Detection. Future Directions.
Chromatin Remodeling Complexes in Heart Valve development Maithri Sarangam Summer 2012 Stankunas Lab.
TISSUE PREPARATION.
NIH-R25 Summer Program for Undergraduate Research
Chromosomes and Cell Cycle. All genetic material of a cell is called the genome Genome is composed of DNA Long molecules of DNA organized for cell division.
Mentor: Jennifer Phillips, PhD University of Oregon- SPUR Program
Genes and Variation Genotypes and phenotypes in evolution Natural selection acts on phenotypes and does not directly on genes. Natural selection.
 6.4 Traits, Genes, and Alleles MA 3.4 Genetic traits result in observed inheritance patterns. MA 3.5 Patterns of inheritance can be explained through.
Epigenetics: Histone Modification II
Research on S. cerevisiae identified genes that coordinately function to regulate transcription.
Forward Genetic Screen for Genes Required for Embryonic Morphogenesis in C. elegans Alexander Miller1, Molly Jud1, Thalia Padilla1, Josh Lowry2, Bruce.
EPIGENETICS Textbook Fall 2013.
7 Steps for Solving Monohybrid Cross Problems
HISTOLOGY.
Mychael Solis-Wheeler Texas Tech University SPUR Intern
What Are Preservatives And Additives.
. - t !!l t. - 1f1f J - /\/\ - ' I __.
Cell-Cycle Checkpoints: Keeping mitosis in check
Concept 18.5: Cancer results from genetic changes that affect cell cycle control The gene regulation systems that go wrong during cancer are the very same.
Jena Donovan, Anna Kordylewska, Yuh Nung Jan, Manuel F Utset 
The multifunctional role of EKLF/KLF1 during erythropoiesis
Types of Chromosome Mutations
Volume 5, Issue 6, Pages (June 2000)
Relationship between Genotype and Phenotype
.. '.. ' 'i.., \. J'.....,....., ,., ,,.. '"'". ' · · f.. -··-·· '.,.. \...,., '.··.. ! f.f.
Hugh Dickinson, Rod Scott  Molecular Cell 
Relationship between Genotype and Phenotype
Silvia E. Racedo, Donna M. McDonald-McGinn, Jonathan H
Volume 19, Issue 6, Pages (June 2014)
Warm-Up –1/11 or 1/12 In birds, yellow feathers are dominant over green feathers. A female bird that has yellow feathers, but whose mom had green feathers,
Types of Chromosome Mutations
Volume 5, Issue 6, Pages (June 2000)
Regulation of CSF1 Promoter by the SWI/SNF-like BAF Complex
Volume 15, Issue 1, Pages (July 2004)
MEIOSIS 11-4 Making gametes…
Hannah K. Long, Sara L. Prescott, Joanna Wysocka  Cell 
Volume 143, Issue 1, Pages (October 2010)
Do Now: 9/16 Make a list of all of the characteristics you think ALL living things have. What do they all need? What do they all do? How do you know.
Deletion of the Scl +19 enhancer increases the blood stem cell compartment without affecting the formation of mature blood lineages  Dominik Spensberger,
Interpretation of Histological sections
Volume 127, Issue 1, Pages (July 2004)
Functional Redundancy of ERK1 and ERK2 MAP Kinases during Development
Punnett Squares.
On–Off Switches for Secondary Cell Wall Biosynthesis
An Engine for Nucleosome Remodeling
Types of Chromosome Mutations
Relationship between Genotype and Phenotype
Volume 19, Issue 2, Pages (August 2003)
Cardiac Morphology, Gene Expression and Histology (Core D)
Antitumor activity of MLN8237 against TNBC patient-derived tumor xenografts (PDTX) in vivo. Antitumor activity of MLN8237 against TNBC patient-derived.
A, TSG-6 staining in TRAMP tissue and TRAMP cell lines.
PVHA increased anti-PD-L1–mediated growth inhibition in 4T1/HAS3 tumors. PVHA increased anti-PD-L1–mediated growth inhibition in 4T1/HAS3 tumors. A, 4T1/HAS3.
Presentation transcript:

T HE E FFECT OF THE BAF C HROMATIN R EGULATOR IN H EART V ALVE M ATURATION OF M US M USCULUS Kelsey Ward Kryn Stankunas, P.I. Brynn Simek, Mentor

C ONGENITAL H EART D ISEASE (CHD) Most common type of birth defect 1 in 125 births

E PIGENETICS AND C HROMATIN R EMODELING

V ALVULOGENESIS

Chromatin Remodeling by the BAF Complex Brg1 BAF = Brg1 -Associated Factor Brg1 is the core ATPase subunit Facilitates both activation and repression Regulates chromatin compaction, nucleosome positioning Null alleles are peri- implantation lethal

V ALVULOGENESIS

B RG 1 D ELETION IN ALL E NDOCARDIAL C ELLS IS E MBRYONIC L ETHAL Stankunas, K.

♂ SCL-Cre-ER(T); Brg1F/F ♀ Brg1 F/F Check Plugs Administer Tamoxifen (2x40mg/kg) Harvest embryos Check Plugs Administer Tamoxifen (2x40mg/kg) Harvest embryos Section at 7 microns H&E stain Image sections Section at 7 microns H&E stain Image sections Methodology Preserve in PFA Transfer to PBS Dehydrate to 100% EtOH Replace with xylenes Replace with paraffin and fix in blocks Preserve in PFA Transfer to PBS Dehydrate to 100% EtOH Replace with xylenes Replace with paraffin and fix in blocks Genotype embryos Imaging whole embryos Characterize valve defects and consider new time points and crosses

V ALVULOGENESIS

T AMOXIFEN A DMINISTRATION AT E12.5ADBC

I S B RG 1 A CTUALLY D ELETED ? Pulmonic ValveMitral Valve

H OW Q UICKLY D OES D ELETION O CCUR ?

V ENTRICULAR S EPTAL D EFECTS

H OW E FFICIENT IS D ELETION ?

C ONCLUSIONS AND F UTURE D IRECTIONS Brg1 deletion has no phenotypic effect on later valve maturation. Characterization of Scl-cre line and optimization of Tamoxifen dosage. Earlier Brg1 deletion leads to cushion defects and ventricular defects. Allowance of a longer growth period before harvesting. Describing the molecular and cellular basis for the phenotypes.

A CKNOWLEDGEMENTS Brynn Simek, Mentor Kryn Stankunas, P.I. Stankunas Lab SPUR Alex Andrew Fern Matt Scott