Building Open Science Luis Ibáñez Kitware, Inc. The Insight Journal.

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Presentation transcript:

Building Open Science Luis Ibáñez Kitware, Inc. The Insight Journal

The Vision Fully-Electronic publication Freely available Fast publishing Reproducibility enforced Open Data Open Source Open Documents Open Forum

Insight Journal Kitware project funded by the National Library of Medicine Program Officer: Dr. Terry Yoo

NLM : champion of Open Access Open Data : Visible Human Open Source: Insight Toolkit Open Publications

NIH Policy on Public Access

Memo from Elias A. Zerhouni, M.D.

NIH Policy on Public Access Beginning May 2, 2005, NIH-funded investigators are requested to submit to the NIH National Library of Medicine's (NLM) PubMed Central (PMC) an electronic version of the author's final manuscript upon acceptance for publication, resulting from research supported, in whole or in part, with direct costs from NIH. The author's final manuscript is defined as the final version accepted for journal publication, and includes all modifications from the publishing peer review process.

NIH Policy on Public Access This policy applies to all research grant and career development award mechanisms, cooperative agreements, contracts, Institutional and Individual Ruth L. Kirschstein National Research Service Awards, as well as NIH intramural research studies.

NIH Policy on Public Access The Policy now requests and strongly encourages that authors specify posting of their final manuscripts for public accessibility as soon as possible (and within 12 months of the publisher's official date of final publication).

Scientific Publishing

The Current State No journal enforces REPRODUCIBILITY No journal publishes CODE, DATA and PARAMETERS No journal publishes NEGATIVE results No journal publishes REPLICATION of work

The Current State Current time to publication is too long ( 1 ~ 2 years) Actual time spent in peer-review does not justify two years of not returning results to taxpayers Code reimplementation is a waste of time.

By Developers for Developers A Journal where you want to publish A Journal that you want to read A Journal that will give you practical solutions

Insight Solution Open SourceOpen Science Agile ProgrammingAgile Publishing Insight ToolkitInsight Journal

Submission Code Input Data Journal CVS Repository Web Site Results Data Author Build Machines PDF doc

Peer-Review (A) Reviewer Selected Papers Checked Paper Reviewer Checked Paper Checked Paper Checked Paper Web Site Checked Paper

Peer-Review (B) Posted Paper Reader 1 Posted Paper Posted Paper Posted Paper Web Site Rating Reader 2 by rating by subject by author Query Rating

Enjoy Open Science !