Clinical Use of DTI Guido Gerig.

Slides:



Advertisements
Similar presentations
Corpus Callosum Damage Predicts Disability Progression and Cognitive Dysfunction in Primary-Progressive MS After Five Years.
Advertisements

Neuro-Imaging High Resolution Ex-Vivo MRI Ex-Vivo DTI of Brain Stem
Imaging Methods: Gait, Cognition and Mood Richard Camicioli MD University of Alberta Edmonton, Alberta
National Alliance for Medical Image Computing Diffusion Weighted MRI.
Anatomy of Brain By Magnetic Resonance Imaging (MRI)
CEREBRAL TRACTS.
Diffusion MRI in Traumatic Brain Injury: Software Tools & Reference Material Workshop on Diffusion MRI in Traumatic Brain Injury: Software Tools and International.
BY PROF. SAEED ABUEL MAKAREM
NAMIC: UNC – PNL collaboration- 1 - October 7, 2005 Fiber tract-oriented quantitative analysis of Diffusion Tensor MRI data Postdoctoral fellow, Dept of.
Reproducibility of diffusion tractography E Heiervang 1,2, TEJ Behrens 1, CEM Mackay 3, MD Robson 3, H Johansen-Berg 1 1 Centre for Functional MRI of the.
Assessing Early Brain Development in Neonates by Segmentation of High-Resolution 3T MRI 1,2 G Gerig, 2 M Prastawa, 3 W Lin, 1 John Gilmore Departments.
New quantitative analysis of high-field 3T MRI/DTI to assess neonatal brain development 1,2 G Gerig, 2 Pierre Fillard, 2 M Prastawa, 3 W Lin, 1 John Gilmore,
Sponsor: Prof. Sidney Spector Computational anatomy to assess growth pattern of early brain development in healthy and disease populations Guido Gerig.
Chapter 3 CNS Gross Anatomy
Diffusion Tensor Imaging (DTI) is becoming a routine technique to study white matter properties and alterations of fiber integrity due to pathology. The.
Diffusion Tractography of the Fornix in Male Schizophrenic Patients Background: White matter fiber tracts, especially those interconnecting the frontal.
Fiber Tracking Techniques in Magnetic Resonance Diffusion Tensor Imaging Grace Michaels CSUN, Computer Science Junior.
NAMIC: UNC – PNL collaboration- 1 - October 7, 2005 Quantitative Analysis of Diffusion Tensor Measurements along White Matter Tracts Postdoctoral fellow,
The UNIVERSITY of NORTH CAROLINA at CHAPEL HILL FADTTS: Functional Analysis of Diffusion Tensor Tract Statistics Hongtu Zhu, Ph.D. Department of Biostatistics.
Diffusion Tensor Imaging: A Pictorial Review of Physics and Major Fiber Tract Anatomy of Cerebral White Matter Abstract ID No.: IRIA
NA-MIC National Alliance for Medical Image Computing DTI atlas building for population analysis: Application to PNL SZ study Casey Goodlett,
AUTOMATIC CLUSTER ANALYSIS OF CORPUS CALLOSUM SUBDIVISIONS IN SCHIZOPHRENIA: A DIFFUSION TENSOR IMAGING STUDY Background: The corpus callosum is a major.
Diffusion-Tensor Imaging Tractography: Correlation with Processing Speed in Aging Stephen Correia 1, Stephanie Y. Lee 2, Song Zhang 2, Stephen P. Salloway.
Cognition, Brain and Consciousness: An Introduction to Cognitive Neuroscience Edited by Bernard J. Baars and Nicole M. Gage 2007 Academic Press Chapter.
Automatic Brain Segmentation in Rhesus Monkeys February 2006, SPIE Medical Imaging 2006 Funding provided by UNC Neurodevelopmental Disorders Research Center.
White Matter Of Cerebrum
Brain Internal Structure Dr. Nimir Dr. Safaa Objectives Describe the types of fibers in the internal capsule. Identify the basal ganglia nuclei. Identify.
Comparative Diffusion Tensor Imaging (DTI) Study of Tool Use Pathways in Humans, Apes and Monkeys Ashwin G. Ramayya 1,2, Matthew F. Glasser 1, David A.
(Pre-)Clinical and Applications with DTI
NA-MIC National Alliance for Medical Image Computing Core 1 & Core 3 Projects.
Ramifications of Isotropic Sampling and Acquisition Orientation on DTI Analyses David H. Laidlaw 1, Song Zhang 1, Mark Bastin 2,3, Stephen Correia 4, Stephen.
The limbic system, or motivational system, includes:
National Alliance for Medical Image Computing UNC: Quantitative DTI Analysis Guido Gerig, Isabelle Corouge Students: Casey Goodlett,
Central nervous system (CNS) Brain + Spinal Cord
Tract-Based Spatial Statistics of Diffusion Tensor Imaging in Adult Dyslexia Todd Richards 1, Jeff Stevenson 1, James Crouch 2, L. Clark Johnson 3, Kenneth.
Early Brain Development in Normal and High Risk Children John H. Gilmore, MD Department of Psychiatry The University of North Carolina.
NA-MIC National Alliance for Medical Image Computing Validation of DTI Analysis Guido Gerig, Clement Vachet, Isabelle Corouge, Casey.
BRAIN. Meninges Cerebrospinal Fluid Function Location Choroid plexus – Circulation.
INTRODUCTION Chronic pain is associated with cortical functional, neurochemical and morphological changes (Grachev et al., 2002, Apkarian et al., 2004).
Gross Structure of the Brain
Diffusion tensor imaging reveals early dissemination of pediatric diffuse intrinsic pontine gliomas Matthias W. Wagner¹, Joyce Mhlanga¹, Thangamadhan Bosemani¹,
NA-MIC National Alliance for Medical Image Computing UNC Core 1: What did we do for NA-MIC and/or what did NA-MIC do for us Guido Gerig,
NA-MIC National Alliance for Medical Image Computing NA-MIC UNC Guido Gerig, Martin Styner, Isabelle Corouge
Chapter 17 Central Nervous System
CEREBRAL MEDULLA & LATERAL VENTRICLE
Integrity of white matter in the corpus callosum correlates with bimanual co-ordination skill Heidi Johansen-Berg 1, Valeria Della-Maggiore 3, Steve Smith.
White Matter Structural Integrity in Healthy Aging Adults and Patients With Alzheimer Disease: A Magnetic Resonance Imaging Study Bartzokis, et al. UCLA.
Corpus Callosum Probabilistic Subdivision based on Inter-Hemispheric Connectivity May 2005, UNC Radiology Symposium Original brain images for the corpus.
NA-MIC National Alliance for Medical Image Computing UNC/Utah-II Core 1 Guido Gerig, Casey Goodlett, Marcel Prastawa, Sylvain Gouttard.
4-9 October 2010, Symposium Neuroradiologicum, Bologna DTI in familiar tuberous sclerosis – comparison of fractional anisotropy and apparent diffusion.
CEREBRUM Dr. Jamila EL Medany. Objectives At the end of the lecture, the student should be able to:  List the parts of the cerebral hemisphere (cortex,
Internal Capsule Dr. Nimir Dr. Safaa Objectives Describe the structure of the internal capsule. Identify different areas of the internal capsule.
Brain Imaging with MRI MRI of Neuronal Network Structure, Function, and Plasticity Henning U. Voss, Nicholas D. Schiff Progress in Brain Research, Vol.
The Role of MRI in Perinatal Anoxic Ischaemic Brain Injury
Core Dartmouth Activities Andrew J. Saykin, Psy.D., ABPP-CN John D. West, M.S. Robert M. Roth, Ph.D. Brain Imaging Laboratory Dartmouth Medical School.
Internal features of the brain D.Nimer D.Rania Gabr D.Safaa D.Elsherbiny.
Dr. Temple Grandin: A Neuroimaging Case Study Jason R. Cooperrider 1,2, Temple Grandin 5, Erin D. Bigler 2,6, Jeffrey S. Anderson 1,3, Nicholas Lange 7,
NA-MIC National Alliance for Medical Image Computing NAMIC Core 3.1 Overview: Harvard/BWH and Dartmouth Structural and Functional Connectivity.
DIFFUSION TENSOR IMAGING AND TRACTOGRAPHY. Introduction Diffusion- random molecular motion also known as Brownian movement Biological systems depend on.
INFLUENCE OF FRACTIONAL ANISOTROPY THRESHOLD FOR TRACT BASED DIFFUSION TENSOR ANALYSIS OF UNCINATE FASCICLES IN ALZHEIMER DISEASE Toshiaki Taoka, Toshiaki.
Statistical Analysis of Anatomy from Medical Images Tom Fletcher School of Computing University of Utah National Alliance for Medical Image Computing.
Corpus Callosum Probabilistic Subdivision based on Inter-Hemispheric Connectivity Martin Styner1,2, Ipek Oguz1, Rachel Gimpel Smith2, Carissa Cascio2,
Copyright © 2012 American Medical Association. All rights reserved.
Core 3-1 Schizophrenia NA-MIC
DIFFUSION ABNORMALITY OF CORPUS CALLOSUM IN ALZHEIMER’S DISEASE
Neuroimaging Schizophrenia and Related Disorders
DTI Course Bring your computer and you will be guided through the steps to reconstruct the white matter fibers of the brain, inspect fibers reaching gray.
CEREBRAL TRACTS. CEREBRAL TRACTS Categories of Tracts Association: Confined to a given hemisphere. Connect regions of the same hemisphere. Commissural:
Diffusion Tensor MRI of White Matter of Healthy Full-term Newborns: Relationship to Neurodevelopmental Outcomes Higher white matter integrity (as reflected.
Presentation transcript:

Clinical Use of DTI Guido Gerig

Early Brain Development Acknowledgments Contributors: Andy Alexander Susumo Mori The University of North Carolina Chapel Hill (UNC) National Alliance for Medical Image Computing (NIH U54EB005149) Early Brain Development

Early Brain Development Example 1 Cerebral Cortex 2005: White Matter Development During Childhood and Adolescence: A Cross-sectional Diffusion Tensor Imaging Study. Barnea-Goraly N, Menon V, Eckert M, Tamm L, Bammer R, Karchemskiy A, Dant CC, Reiss AL. Department of Psychiatry and Behavioral Sciences, Stanford University Voxel-by-voxel analysis of FA During childhood and adolescence, white matter anisotropy measured by FA changes in brain regions that are important for attention, motor skills, cognitive ability, and memory. With increasing age, FA values increased in prefrontal regions, in the internal capsule as well as in basal ganglia and thalamic pathways, the ventral visual pathways, and the corpus callosum. This typical developmental trajectory may be altered in individuals with disorders of development, cognition and behavior. Early Brain Development

Early Brain Development Example 2 Acad Radiol. 2005: Age-related structural changes in the young adult brain shown by magnetic resonance diffusion tensor imaging Yoshiura T, Mihara F, Tanaka A, Togao O, Taniwaki T, Nakagawa A, Nakao T, Noguchi T, Kuwabara Y, Honda H. Department of Clinical Radiology, Kyushu University Japan Histogram analysis of Mean diffusivity + FA Overall histogram analysis revealed increase in mean FA and a decrease in max FA with increasing age. No age-related changes in mean diffusivity. Early Brain Development

Early Brain Development Example 3 Arch Gen Psychiatry. 2004 Pathways that make voices: white matter changes in auditory hallucinations. Hubl D, Koenig T, Strik W, Federspiel A, Kreis R, Boesch C, Maier SE, Schroth G, Lovblad K, Dierks T. Department of Psychiatric Neurophysiology, University Hospital of Bern, Switzerland. FA histogram analysis measurements in DTI covering the Sylvian fissure Region of interest analysis in selected regions. Patients with hallucinations had higher FA in the lateral parts of the temporoparietal section of the arcuate fasciculus and in parts of the anterior corpus callosum compared with control subjects and patients without hallucinations. Patients with hallucinations had higher FA in the left hemispheric fiber tracts, including the cingulate bundle compared with patients without hallucinations. Early Brain Development

DTI Applications Normal brain development and aging Congenital anomalies and diseases of white matter Traumatic brain injury Encephalopathies – toxic, metabolic, infectious Demyelinating and neurodegenerative diseases Ischemia and stroke Neoplasm, preoperative planning Epilepsy Dementia, schizophrenia, depression Developmental disorders - fragile X, autism Spinal Cord ASNR 2003 –Washington,DC DT-MRI Alexander

Normal Brain Development Significant changes in anisotropy values of the white matter of the centrum semiovale take place well before changes in T1 and T2 relaxation detected by standard imaging methods. Cerebral cortex in infants less than 32 weeks gestational age (GA) has nonzero anisotropy values. Cortical A values decrease with increasing GA (r = 0.81, p < 0.05) and are consistent with zero after 35 weeks GA. The major axis of the diffusion ellipsoid is oriented radially, as would be expected if anisotropy were due to the radial orientation of apical dendrites of pyramidal cells. Courtesy J. Neil Washington Univ., St. Louis ASNR 2003 –Washington,DC DT-MRI Alexander

WM Anisotropy Changes with Age Pfefferbaum et al. MRM 2000 genu frontal pericallosal centrum semiovale Genu Left pericallosal Right pericallosal .3 .4 .5 .6 .7 .8 20 30 40 50 60 70 80 Age Anterior FA Splenium Posterior .34 .36 .38 .40 .42 .44 .46 .48 Centrum Semiovale parietal splenium Courtesy K. Lim, Univ. Minn. ASNR 2003 –Washington,DC DT-MRI Alexander

Multiple Sclerosis ASNR 2003 –Washington,DC DT-MRI Alexander R. Bammer, F. Fazekas, Neuroim Clinics N Am, Feb. 2002. S T A N F O R D S C H O O L OF M E D I C I N E Lucas MRS/I Center ASNR 2003 –Washington,DC DT-MRI Alexander

(Lim et al., Arch Gen Psychiatry 1999) Schizophrenia Structural Volume (FSE) 100 200 300 400 500 CSF Gray White Fractional Anisotropy ** Median FA SZ (N=10) NC (N=10) ** p < .005 20000 40000 60000 80000 Number of pixels CSF Gray White This is a summary of the structural and FA data. On the left are the pixel counts for the CSF, gray and white matter. There was a slight but not significant increase in CSF, no difference in WM and a significant deficit in GM. On the right are the FA values for each of the three compartments. For FA, no difference in CSF or Gray, but a significant difference in WM. (Lim et al., Arch Gen Psychiatry 1999) ASNR 2003 –Washington,DC DT-MRI Alexander

Negative Symptoms in Schizophrenia No significant correlations found with mean diffusivity Only significant correlations for FA found at AC-5 Courtesy K. Lim Univ. Minnesota ASNR 2003 –Washington,DC DT-MRI Alexander Wolkin et al., AJP, in press

DTI in Cerebral Neoplasms Deviated Infiltrated Edematous Destroyed ASNR 2003 –Washington,DC DT-MRI Alexander

Tract Displacement T2W ADC FA FA  1 ASNR 2003 –Washington,DC Anaplastic astrocytoma ASNR 2003 –Washington,DC DT-MRI Alexander

Tract Infiltration Edema Oligo T2W ADC FA FA  1 T2W ADC FA FA  1 Grade 3 astro ASNR 2003 –Washington,DC DT-MRI Alexander

Pilocytic Astrocytoma Preop Postop T2W ADC T2W ADC FA FA  1 FA FA  1 ASNR 2003 –Washington,DC DT-MRI Alexander

Cerebral Palsy Courtesy of Susumu Mori

Fiber Tract-Oriented Statistics for Quantitative Diffusion Tensor MRI Analysis Isabelle Corouge1,2, P. Thomas Fletcher4, Sarang Joshi3, John H. Gilmore2, Guido Gerig1,2 1Depts of Computer Science, 2Psychiatry, 3Radiation Oncology, UNC-Chapel Hill, USA 4Scientific Computing and Imaging Institute, University of Utah, USA MICCAI 2005 - 17 - October 27, 2005

Quantitative Tractography Tract ROIs FA along tracts Tensors statisics along spines FA motor tract MD motor tract - Tractography for ROI definition - Tensor-math. for statistics along tracts MICCAI 2005 - 18 - October 27, 2005

Fiber Tract Modeling and Analysis MICCAI 2005 - 19 - October 27, 2005

Experiments and Results Data 3Tesla high resolution (2x2x2 mm3) DT MRI database 8 subjects: 4 neonates at 2 weeks-old, 4 one year-old Fiber tracts: genu and splenium Neonate at 2 weeks-old One year-old MICCAI 2005 - 20 - October 27, 2005

Experiments and Results Average of diffusion tensors in cross-sections along tracts Genu Splenium 2 weeks-old One year-old MICCAI 2005 - 21 - October 27, 2005

Experiments and Results Diffusion properties along fiber tracts Eigenvalues Mean Diffusivity Fractional Anistropy Genu Splenium MICCAI 2005 - 22 - October 27, 2005

Neonate Krabbe’s - Motor Internal capsule from brain stem to superior cortex Left and right hemispheric bundles FA values on bundle Motor cortex VL thalamus Pontine nuclei Cerebellar cortex Deep cerebellar nuc-dentate middle cerebellar peduncle superior cerebellar corona radiata internal capsule cerebral Fallon Premotor Prefrontal MICCAI 2005 - 23 - October 27, 2005

Visualization - Left Bundle Controls FA seems to correlate with outcome At 1y Weak trunk Bad motor At 1.5y Walks Good motor At 3m Ok so far MICCAI 2005 - 24 - October 27, 2005

Visualization - Right Bundle Controls FA higher in Cnt than Krabbe At 1y Weak trunk Bad motor At 1.5y Walks Good motor At 3m Ok so far MICCAI 2005 - 25 - October 27, 2005

FA Statistics along Fibers Lower FA across most of bundle for Krabbe Bad motor case has consistently lowest FA on left bundle Possible predictor for outcome? Controls good motor bad motor MICCAI 2005 - 26 - October 27, 2005