Issues in Inorganic Synthesis. Ligand synthesis in NaOH pH ~11 MeOH 20 h or so Solvent : ethylene glycol.

Slides:



Advertisements
Similar presentations
Chemistry Bellwork.
Advertisements

The Two Bioinorganic Projects of Research Methodology Fall 2012.
Three-Dimensional Symmetry
Organometallic Chemistry. 1
The Molybdenum Cofactor: Moco
Synthesis, Structures and Ethylene Oligomerization Reactivity of Transition Metal Complexes Supported by Multidentate Amidine-Based Ligands T. C. Jones,
Lecture 20 X-Ray Diffraction (XRD)
Lecture 21 (12/11/2006) X-Ray Diffraction (XRD) Theory and Analytical Technique.
Determination of Crystal Structures by X-ray Diffraction
Determination of Protein Structure. Methods for Determining Structures X-ray crystallography – uses an X-ray diffraction pattern and electron density.
X-Ray Crystallography The most important technique for mineralogy The most important technique for mineralogy Direct measurement of atomic arrangement.
The colors of copper The colors of cobalt.
Chapter 11 1 Ch 11 Page 467 Intermolecular forces according to Google Images:
Overview energy is required for all cellular work most organisms produce ATP by using energy stored in the bonds of organic molecules such as carbohydrates.
Typical Crystal Structures
Transition Metal Coordination Compounds
X-ray Diffraction (XRD) and Forensic Geology X-ray diffraction pattern for goethite X-ray diffractometer (XRD) laboratory.
Lecture 12 (10/30/2006) Crystallography Part 5: Internal Order and 2-D Symmetry Plane Lattices Planar Point Groups Plane Groups.
3. Crystals What defines a crystal? Atoms, lattice points, symmetry, space groups Diffraction B-factors R-factors Resolution Refinement Modeling!
Midterm and course website 1)Midterm: Friday, Oct 12, 2007 Please mark your calendar!! 2) Physics 100 Home Page
X-Ray Diffraction: Determining the distance between planes of atoms X-rays and atoms Orders of diffraction Bragg’s Law.
Metal-Metal Bonds Chapter 15. Metal-Metal Bonds Single, double, triple, and quadruple bonds are possible in transition metal complexes. –Figure 15-7;
X-Ray Diffraction for Soils
Advanced Inorganic Chemistry
Protein Structure Determination Part 2 -- X-ray Crystallography.
Determining Chemical Formula
Chapter 7 X-Ray diffraction. Contents Basic concepts and definitions Basic concepts and definitions Waves and X-rays Waves and X-rays Crystal structure.
PH 0101 UNIT 4 LECTURE 1 INTRODUCTION TO CRYSTAL PHYSICS
Contents First Semester Ch 1. Introduction to Inorganic Chemistry Ch 2. Atomic Structure Ch 3. Simple Bonding Theory Ch 4. Symmetry and Group Theory Ch.
Introduction to Macromolecular X-ray Crystallography Biochem 300 Borden Lacy Print and online resources: Introduction to Macromolecular X-ray Crystallography,
1.There are billions of materials in our universe. 2.Those materials are made up from about 100 elements only. Atoms and Elements.
Chapter 2: Chemical Basis of Life Part II: Chemical Reactions Acids and Bases Inorganic Substances.
Pp. Synthesis  two or more elements or compounds may combine to form a more complex compound.  Basic form: A + X → AX  EX. 2Mg (s) + O 2(g) → 2MgO.
Matter– & Matter – anything that takes up space & has mass
Single-crystal X-ray Crystallography ● The most common experimental means of obtaining a detailed picture of a large molecule like a protein. ● Allows.
Crystallographic Databases I590 Spring 2005 Based in part on slides from John C. Huffman.
Spectroscopic Analysis of Molybdenum Model Compounds by: 1.Infrared 2. 1 H NMR 3.Electronic (UV/vis) 4.ESI-MS Why? What did I make? How do molecules differ?
Water’s chemical formula is H 2 O made of two hydrogens atoms and 1 oxygen atom formed by covalent bonds.
Biochemistry CHAPTER 2-4. Ultra - Ever Dry W6WE.
Biochemistry. Basic Elements 99% of all living things are: Sulfur (S) Carbon (C) Hydrogen (H) Nitrogen (N) Oxygen (O) Phosphorus (P)
Enzyme mechanisms B. X-ray methods 1 Small angle X-ray scattering (SAX) Kinetic crystallography – slow reactions Kinetic crystallography – Laue method.
Dr Gihan Gawish 1.  The absorption spectrum of a chromophore is primarily determined by the chemical structure of the molecule. A( λ)= e l c Dr Gihan.
The Braggs and X ray Crystallography By sending radiation through crystal structures you should be able to produce diffraction around the atoms.
Plasma-Assisted Synthesis of Molybdenum Carbide Catalysts
Chapter 1 Electronic Structure and Covalent Bonding Dr. Sujatha Krishnaswamy Chemistry Faculty Chandler Gilbert Community College.
Midterm Review Day 2 Do Now: HW, Calculator, and Reference Tables out.
Blood is red because of the iron in hemoglobin.
 The amount of matter in the object  How much an object weighs.
UV/vis Spectroscopy = Electronic Spectroscopy What does it monitor / probe? What information about molecule can one obtain?
An Introduction to Structures and Types of Solids
Basic Chemistry CHAPTER 2-3. Polarity Covalently bonded molecules.
The Molybdenum Cofactor: Moco What early experiments indicated: … but it wasn’t entirely correct.
Lecture 53: X-ray crystallography. Electrons deflect x-rays We try to recreate electron density from the x-ray diffraction pattern Each point in space.
Types of Reactions. Addition Reactions A + B  AB H 2 + O 2  H 2 O.
What is Matter?.
youtube. com/watch. v=WIoS7WJDZT8 youtube
Propylene Sulfide - C2H4S
Crystals and Their Structure
MOLECULAR ORBITAL THEORY
RADICAL REACTION Radical reaction is homolytical reaction. When the bonds breaks and the atoms get one bonding electron each, the process is called homolysis.
Protein Structure Determination
Vitamins – micronutrients Organic Fat or water soluble
Elmhurst College, Elmhurst, Illinois
Bonding Tendencies Wednesday, November 15, 20167
Crystal Structure of the 100 kDa Arsenite Oxidase from Alcaligenes faecalis in Two Crystal Forms at 1.64 Å and 2.03 Å  Paul J. Ellis, Thomas Conrads,
Chapter 16: Ethers, Epoxides, and Sulfides
Chemical Formulas Coefficient Subscript #of molecules 5CO2 #of atoms.
COUNTING ATOMS Example #1 Example #2 NaOH Na – 1 atom O - 1 atom
Formulas Molecular formula represents the numbers and types of atoms in a molecule H2O, C6H12O6 Structural formula gives the arrangement of atoms 3-D models.
Vibrational Spectroscopy
Presentation transcript:

Issues in Inorganic Synthesis

Ligand synthesis in NaOH pH ~11 MeOH 20 h or so Solvent : ethylene glycol

Porphyrin substituents on heme in hemoglobin Metallation of porphyrin How do you know when the reaction is done? Anything change at Fe?

Molybdenum Reactions. List them and conditions  MoOCl 2 detc 2  Mo 2 O 3 detc 4  MoOS 2 detc 2  MoOdetc 2

Fe and Ru Reactions. List them and conditions  FeCl(porphyrin)  Ru(bpy) 2 (L-pterin)

Mechanism:

an advertisement

What’s the difference between pictures A and B? A B from X-ray crystallography from Chem 3D; “guessed” structure

X-ray Crystallography: the closest we can get to photographing our molecules! single crystal (not a powder or many tiny crystals) periodic array of atoms symmetrically oriented produces accurate (almost) bond distances and bond angles The method: see U.Penn X-ray FacilityU.Penn X-ray Facility see on-line X-ray Courseon-line X-ray Course see illustration of Space Group Symmetryillustration of Space Group Symmetry one of my old structures (on Cu)old structures (on Cu)

A single crystal structure of a Mo molecule from my lab:

Who wants to go see it done?