SXD SXD Solvent eXtraction Database Solvent eXtraction Database A. Varnek, V. P. Solov’ev, N. Sieffert.

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Presentation transcript:

SXD SXD Solvent eXtraction Database Solvent eXtraction Database A. Varnek, V. P. Solov’ev, N. Sieffert

Handbooks Reference Books, etc. Databases 2 Global Process of Transformation of Knowledge and Intelligence

Database Information Data Sources Types of Data Presentation of Data 3 Solvent Extraction Database Two Groups of Components for Database SXD Management System OS Platform Personal or Distributed Internal Formats Data Fields Data Editors Export/Import of Data Search System

SEPSYS, Bibliographic DB, W. J. McDowell and B. Moyer ~ 4500 Records SEDATA, Factual INTERNET DB, Japan ~ Records Bibliography Search in Databases: PASCAL, INIST Science Citation Index, STN Chemical Abstracts, CAS  more than papers  – extraction systems since SXD Solvent Extraction Database Data Sources

Database Information Data Sources Types of Data Presentation of Data 5 Solvent Extraction Database Type of Information Contents SXD Management System OS Platform Personal or Distributed Internal Formats Data Fields Data Editors Export/Import of Data Search System 1. Bibliography 2. Chem. Structures 3. Facts

Database Information Data Sources Types of Data Presentation of Data 6 Solvent Extraction Database Data Presentation SXD Management System OS Platform Personal or Distributed Internal Formats Data Fields Data Editors Export/Import of Data Search System 1. Text 2. Tables 3. Figures 4. Graphs

Database Information Data Sources Types of Data Presentation of Data 7 Solvent Extraction Database Operation System Platform SXD Management System OS Platform Personal or Distributed Internal Formats Data Fields Data Editors Export/Import of Data Search System Windows 9*/ME/NT/2K/XP Unix

Database Information Data Sources Types of Data Presentation of Data 8 Solvent Extraction Database Personal and Distributed Management Systems SXD Management System OS Platform Personal or Distributed Internal Formats Data Fields Data Editors Export/Import of Data Search System Stand-Alone Application Internet Client-Server Application

Database Information Data Sources Types of Data Presentation of Data 9 Solvent Extraction Database Personal and Distributed Management Systems SXD Management System OS Platform Personal or Distributed Internal Formats Data Fields Data Editors Export/Import of Data Search System Paradox SQL

Database Information Data Sources Types of Data Presentation of Data 10 Solvent Extraction Database Data Fields of Database Record SXD Management System OS Platform Personal or Distributed Internal Formats Data Fields Data Editors Export/Import of Data Search System

11 Solvent Extraction Database Data Blocks of SXD Record SXD I. Description of Extraction System II. Extraction Properties III. Bibliographic Data

12 Solvent Extraction Database I. Description of Extraction System SXD 1. Extractant 2. Extracted Species 3. Phases 4. Experimental Conditions

13 SXD Description of Extraction System Extractant 1. Extractant D Structure D Structure 1.3. Name 1.4. Short Name 1.5. Ligand Class 1.6. Name(s) of CoExtractant(s) 1.7. Formula 1.8. Molecular Weight 1.9. CAS Number Abbreviation Symbol Name for Reaction Concentration units min, max, single

SXD Extracted Species (Chem. Forms of Metals) 2.1. Formula for Metal 2.2. Name 2.3. Compound (Salt, etc.) 2.4. Concentration units min, max, single Description of Extraction System Extracted Species (Metal Forms)

SXD 15 Description of Extraction System Phases 3. Phases 3.1. Organic Phase Solvents Conc., Units Background Compounds Conc., Units 3.2. Water Phase Background Compounds Conc., Units Ionic Strength pH

SXD 16 Description of Extraction System Experimental Conditions 4. Experimental Conditions 4.1. Temperature Units 4.2. Pressure Units 4.2. Equilibration Conditions 4.3. Experimental Techniques 4.4. Remarks

17 Solvent Extraction Database Data Blocks of SXD Record SXD I. Description of Extraction System II. Extraction Properties III. Bibliographic Data

18 Solvent Extraction Database II. Extraction Properties SXD 1. Functional Dependences 2. Equilibrium Extraction Parameters 3. Parameters for Kinetic Processes

SXD 19 Extraction Properties Functional Dependences 1. Functional Dependences 1.1. Graph Y = F(X) Axis X Property name, Units Axis Y Property name, Units 1.2. Table X and Y Columns

SXD 20 Extraction Properties Equilibrium Extraction Parameters 2. Equilibrium Extraction Parameters 2.1. Chemical Reaction or Extracted Compound 2.2. Thermodynamic Functions for Extraction Equilibrium (Log ,  G,  H,  S, LogD) 2.4. Separation Factor  A,B for A and B metals 2.3. Property Names and Values for any 6 of 12 Parameters

SXD 21 Extraction Properties Equilibrium Extraction Parameters 2. Equilibrium Extraction Parameters 2.1. Chemical Reaction or Extracted Compound 2.2. Thermodynamic Functions for Extraction Equilibrium (Log ,  G,  H,  S, LogD) 2.4. Separation Factor  A,B for A and B metals 2.3. Property Names and Values for any 6 of 12 Parameters Set of Parameters: Decontamination Factor Enrichment Factor (S) Extraction Factor (D m ) Fraction Extracted (%E) Fraction Extracted Max (max %E) Partition Constant (K od ) Partition Ratio (K d ) Phase Volume Ration (r) Phase Flowrate Ratio pH 1/2 Transfer Activity Coefficient Ultimate Capacity

SXD 22 Extraction Properties Parameters for Kinetic Processes 3. Parameters for Kinetic Processes 3.1. Chemical Reaction 3.2. Kinetic parameters Rate Const.,  G #,  H #,  S #, T

23 Solvent Extraction Database Bibliographic Fields of SXD Record SXD III. Bibliographic Data 1. Authors 2. Title 3. Source and Date 4. Keywords 5. Abstract 6. Addresses

Database Information Data Sources Types of Data Presentation of Data 24 Solvent Extraction Database Data Editors SXD Management System OS Platform Personal or Distributed Internal Formats Data Fields Data Editors Export/Import of Data Search System

25 Solvent Extraction Database Data Editors SXD Internal Editors: EdChemS - MOL EdiSDF - SDF EdiTXT - TXT External Editors: ChemDraw - MOL ISIS/Draw - MOL

Database Information Data Sources Types of Data Presentation of Data 26 Solvent Extraction Database Export and Import of Data SXD Management System OS Platform Personal or Distributed Internal Formats Data Fields Data Editors Export/Import of Data Search System

27 Solvent Extraction Database Export and Import of Data SXD Information Exchange Structure-Data File (SDF) MDL Information System Inc. A. Dalby, J.G. Nourse, W.D. Hounshell, A.K.I. Gushurst, D.L. Grier, B.A. Leland, J. Laufer J. Chem. Inf. Comput. Sci., 1992, 32, External Structure Data File Internal Paradox or SQL Table

28 Solvent Extraction Database Import of Factual and Textual Data SXD Bibliography SEPSYS PASCAL SCI CA Facts SEDATA Structure Data File Internal File Converters Internal Paradox or SQL Table

29 Solvent Extraction Database Import of Plots and Figures SXD Graphical Digitazer Transforming graphical information into digital form

Database Information Data Sources Types of Data Presentation of Data 30 Solvent Extraction Database Search System SXD Management System OS Platform Personal or Distributed Internal Formats Data Fields Data Editors Export/Import of Data Search System

31 Solvent Extraction Database Data Fields and Search System SXD 85 Data Fields are organized in 12 relational Tables A search of information can be performed for any data field

32 Solvent Extraction Database Search System SXD Textual and Numerical Data Search for: 2D Structure and Substructure Graph Comparison

33 Solvent Extraction Database Conclusion SXD 1. SXD contains ~ 1000 Records Textual, numerical, structural and graphical data 85 Information Fields 2. Two types of SXD Application Stand-Alone - Delphi Source Code Lines Tools Lines Internet Client-Server Lines of Source Code 3. Original Substructure search algorithm Comparison of Functional dependences and Graphs 4. Concepts recommended by IUPAC for solvent extraction 5. SXD is the constituent of ISIDA Project

34 ACKNOWLEDGEMENTS Nicolas JOB Olga KLYMCHUK Natalia BUKAR GDR PARIS Région Alsace

Bibliographic Solvent Extraction Database ChemFinder Pro database management system 35 BSXD Fields of Database Record: 1. Authors 2. Title 3. Source and Date 4. Keywords 5. Abstract 6. Addresses

36 Bibliographic Solvent Extraction Database BSXD-SDF database management system 36 BSXD Fields of Database Record: 1. Authors 2. Title 3. Source and Date 4. Keywords 5. Abstract 6. Addresses