A method of data sharing in 2007 PRIME project and a study of its integration into NAREGI data grid environment UPDATE Eisaku Sakane Cybermedia center.

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Presentation transcript:

A method of data sharing in 2007 PRIME project and a study of its integration into NAREGI data grid environment UPDATE Eisaku Sakane Cybermedia center Osaka University PRAGMA 14 Workshop March 11, 2008 National Museum of Natural Science, Taichung

Research Objective of PRIME 2007 Big Ultimate Objective: Big Ultimate Objective: + build/visualize/mathematically analyze 3D cardiomyocyte (Heart Cell) model --> High Resolution --> Finite Elements --> Normal & Failing Hearts --> Base on Realistic Anatomical Structures Research Center for Ultra-High Voltage Electron Microscopy UHVEM - Osaka Univ. Cardiac Mechanics Research Group CMRG - UCSD National Center for Microscopy and Imaging Research NCMIR - UCSD Cybermedia Center CMC - Osaka University *Acknowledgement: Young Chun, UCSD

National Center for Microscopy and Imaging Research UHVEM Storage Cybermedia Center IMOD (X11 client) data Overall UHVEM - CMC - NCMIR Data flow WebDAV CCD camera controller SCP/SFTP Cell Centered Database data Research Center for Ultra-High Voltage Electron Microscopy X11 server

National Center for Microscopy and Imaging Research UHVEM Gfarm-VO Cybermedia Center IMOD data Integration into NAREGI data grid WebDAV CCD camera controller SCP/gfreg (gfarm) Cell Centered Database data Research Center for Ultra-High Voltage Electron Microscopy NAREGI Portal SS/IS GridVMs data Tomographic/3D reconstruction Virtual Organization ``Data provider VOMS

Gfarm-VO Gfarm client proxy cert. with VO attributes VO name VO1 VO3 VO2 Auto selection VO name Select suitable spool dir. gfsd RP provides storages for VO1 and VO2.

Current Status We are building an experimental system for NAREGI data grid at CMC: –Based on NAREGI M/W β2 –Gfarm-VO –VOMS A VO composed of UHVEM, NICMIR, CMC –Design a function of importing data into Gfarm filesystem automatically