Guest Inclusion of Butadiyne-Bridged Macrocycles Tobe Lab. M1 Hiroshi Takeda.

Slides:



Advertisements
Similar presentations
The Construction of 2D Networks on Surface via Host-guest Interaction Keisuke Katayama Tobe Lab.
Advertisements

Guest Inclusion in Butadiyne- Bridged Macrocycles (ブタジイン架橋マクロサイクルのゲスト分子包摂) Tobe Lab. M1 Hiroshi Takeda 1.
Construction of Two-Dimensional Pore with Fluorinated Alkyl Groups Tobe Lab. Keisuke Katayama.
Chiral HPLC.
Bonding IB Chemistry 2 Robinson High School Andrea Carver.
Happyphysics.com Physics Lecture Resources Prof. Mineesh Gulati Head-Physics Wing Happy Model Hr. Sec. School, Udhampur, J&K Website: happyphysics.com.
Morphological Evolution during Graphene Formation on SiC(0001) Randall Feenstra, Carnegie Mellon University, DMR Graphene, consisting of monolayer.
Energy Band View of Semiconductors Conductors, semiconductors, insulators: Why is it that when individual atoms get close together to form a solid – such.
P461 - Semiconductors1 Semiconductors Filled valence band but small gap (~1 eV) to an empty (at T=0) conduction band look at density of states D and distribution.
1.1 Materials Self-Assembly
Surface Characterization by Spectroscopy and Microscopy
Structure, Bonding & Properties of Solids
Single Molecule Dissociation by Tunneling Electrons.
Basic Imaging Modes Contact mode AFM Lateral Force Microscopy ( LFM)
Spectroscopic Techniques for Probing Solid Surfaces Part II of Surface Primer.
Functionalizing hydrogen-bonded surface networks with self-assembled monolayers Rafael Madueno, Minna T. Räisänen, Chistophe Silien, Manfred Buck Nature.
Tools of the Nanosciences There’s plenty of room at the bottom It is my intention to offer a prize of $1,000 to the first guy who can take the information.
Chemistry in Biology.
1 Lecture: Solid State Chemistry (Festkörperchemie) Part 2 (Further spectroscopical methods, ) H.J. Deiseroth, SS 2004.
BONDINGPREVIEW. Bonds Between Atoms Covalent Ionic Polyatomic Ions Metallic Molecular Substance Polar Nonpolar Coordinate Covalent Network Solids What.
What you should learn: How compounds differ from the elements that make them How a chemical formula represent the ratio of atoms in a compound How the.
Bonding IB Chemistry 2 Robinson High School Andrea Carver.
Blue-Colored Donor-Acceptor [2]Rotaxane Taichi Ikeda, Ivan Aprahamian, and J. Fraser Stoddart, Org. Lett. 2007, 9, Kazuhiro IKUTA Tobe Lab.
Tobe Laboratory Kyohei Kaneko. Introduction ・ Concept of 2D Polymer ・ Graphene ・ Chemical Reaction on The Surface Observation Conditions of STM ・ Liquid/Solid.
Chemistry XXI M2. Inducing Electron Transitions. M1. Controlling Electron Transfer Analyze electron transfer between coupled systems. Explore the effect.
The Nature of Molecules Chapter 2. 2 Atomic Structure All matter is composed of atoms. Understanding the structure of atoms is critical to understanding.
Do molecular rectifiers exist? Fatemeh Gholamrezaie June 2006 RuGRuG.
Basic Electronics By Asst Professor : Dhruba Shankar Ray For B.Sc. Electronics Ist Year 1.
Chemical Basis of Life Chapter 2. Introduction Matter - anything that has mass Made of elements Substance that cannot be broken down to other substances.
Plasma Application LAB Wide range dielectric spectroscopy of ZnO-based varistors as a function of sintering time 발표자 : 권득철.
Nanowires and Nanorings at the Atomic Level Midori Kawamura, Neelima Paul, Vasily Cherepanov, and Bert Voigtländer Institut für Schichten und Grenzflächen.
Imaging & Actuation of Nanocar Molecules by Scanning Tunneling Microscopy (NIRT – ECCS # ) A. J. Osgood, 1 J. Zhang, 1 T. Sasaki, 2 J. Guerrero,
Introduction to Chemistry Chapter 2. Introduction Matter - anything that has mass Made of elements (92 naturally occurring Element - substance that cannot.
Chemical bonds hold compounds together.
Scanning Probe Microscopy Colin Folta Matt Hense ME381R 11/30/04.
Chemical Context of Life. MATTER occupies space and has mass The kinds of matter that make up everyday objects including rocks, paper clips and frogs,
1 Nuclear Magnetic Resonance Nuclear Magnetic Resonance (NMR) Applying Atomic Structure Knowledge to Chemical Analysis.
Tobe Laboratory Kyohei Kaneko 1. Introduction ・ Concept of 2D Polymer ・ Previous Research Toward The Synthesis of 2D Polymer on Surfaces ・ My Project.
NIRT/GOALI: SELF ASSEMBLY AT ELECTRONIC AND PHOTONIC SCALES S.M. Lindsay (PI) Hao Yan (Co-PI) Rudy Diaz (Co-PI) Devens Gust (Co-PI) Shreya Battacharyya,
Modeling of an interface between two solids Ashcroft and Mermin Ch. 18 Sze Ch Review Chapter by Tersoff.
Ferroelectric Nanolithography Extended to Flexible Substrates Dawn A. Bonnell, University of Pennsylvania, DMR Recent advances in materials synthesis.
EPSRC Portfolio Partnership in Complex Fluids and Complex Flows Nanoscale Charge Writing on SnO 2 The ability to selectively position nanoscale objects.
목원대학교 전자정보통신공학부 전자기학 5-1 Chapter 5. Conductors, Dielectrics, and Capacitance 1.Current and Current Density Current(A) : a rate of movement of charge passing.
ON THE INTERPRETATION OF GRAPHITE IMAGES OBTAINED BY STM Constantinos Zeinalipour-Yazdi 1, Jose Gonzalez 2, Karen I. Peterson 2, and David P. Pullman 2.
FUNCTIONAL GROUPS. ……..an atom or bond……… or a group of atoms or bonds that is attached to one or more C atoms that has a…….. … characteristic chemical.
NEEP 541 Ionization in Semiconductors Fall 2002 Jake Blanchard.
Solids and Modern Materials Chapter 12
Particle in a “box” : Quantum Dots
Hydrogen-bond between the oppositely charged hydrogen atoms It was suggested by crystal structure analysis. A small number of spectroscopic studies have.
Manipulating Atoms and Molecules Moving atoms with the STM Unwinding proteins with an AFM Using an AFM tip as pen.
Session 4: Basic Electrical Concepts Unit I: Physics Associated with Nuclear Medicine Instrumentation Part B CLRS 321 Nuclear Medicine Physics and Instrumentation.
A. Orozco, E. Kwan, A. Dhirani Department of Chemistry, University of Toronto SCANNING TUNNELING MICROSCOPY: A NEW CHM 326 LAB.
Metallic Bonding. Metallic Bonds are a special type of bonding that occurs only in metals A metallic bond occurs in metals. A metal consists of positive.
Introduction to Semiconductors CSE251. Atomic Theory Consists of Electron, proton, neutron Electron revolve around nucleus in specific orbitals/shells.
Band Theory of Electronic Structure in Solids
The Nature of Molecules Chapter 2. 2 Do Now Complete Vocab pre-quiz for Ch 2.
Chemical bonds and molecular models.  Compounds are composed of chemical bonds  Bonds are result of interactions between particles- electrons and protons.
The Nature of Molecules
Trabajo Final de Máster Submitted by Hazem Essam Elsayed Okda
Introduction The research eld of nanoscale science and technology has made tremendous progress in the past decades, ranging from the experimental manipulations.
Characterization of CNT using Electrostatic Force Microscopy
Bioconjugation Bioconjugation is the process of joining of biomolecules to other biomolecules, small molecules, and polymers by chemical or biological.
The Chemistry of Biology
Probing a New Form of Surface Chemistry: Interactions with Point Defects Edmund G. Seebauer, Department of Chemical & Biomolecular Engineering, University.
Nuclear Magnetic Resonance (NMR)
Introduction to Biochemistry. Objectives  Know what biochemistry is and its principle.  Know the components of a cell and its major types of bio- molecules.
Chemical Basis of Life Chapter 2.
Principle of separation of different components:
Chapter 6 Chemistry in Biology
Presentation transcript:

Guest Inclusion of Butadiyne-Bridged Macrocycles Tobe Lab. M1 Hiroshi Takeda

Contents ・ What is Macrocycles ・ Complexation of cyclothiophene with fullerene on a surface ・ My work ・ Summary 2

Macrocycles: Definition and Utilities Macrocycles are defined as any molecules having a ring of nine or more atoms. Macrocyclic natural products ⇒ Superior biochemical functionalities development as drugs 3 clarithromycin

Shape-Persistent Macrocycles In recent years, intense interest have been paid for π-conjugated in shape-persistent macrocycles ⅰ ) large, supramolecular building blocks that generate π-stacked structures in solution ⅱ ) noncollapsable nanoporous solids 4 In my laboratory syntheses and properties of the shape-persistent macrocycles consisting of aromatic rings and triple bonds have been reported. They showed self-association and binding to large organic substrate.

Host-Guest Chemistry Hosts and guests held together in solution in definable structural relationships by electrostatic forces (enthalpic component) Macrocycles (Host): Organic molecule containing convergent binding sites. Synthetic counterparts to receptor sites in enzymes, genes, antibodies and ionophores Guest: Molecules or ions containing divergent binding sites. Counterparts to substrates, inhibitors, cofactors, antigens 5

Complexation of Butadiyne-Bridged Pyridinophane with T ropylium Cation in S olution 6 R=C 8 H 17 To examine the binding ability of pyridinophanes 1 and 2, we choose tropylium ion was chosen as a guest. The chemical shift change of the aromatic protons of 1 and 2 on 1 H-NMR titration measurements with tropylium cation was analyzed and calculate for complex formation constant. tropylium ion 1 2

Complexation of Butadiyne-Bridged Pyridinophane with Tropylium Cation in Solution 7 R=C 8 H 17 On the basis of 1 H-NMR titration measurements, The nonlinear least-squares regression analysis gave K11(1:1) and K21(2:1) → For 1, K11 = 3×10 3 M -1 and K21 = 3×10 4 M -1 For 2, K11 = 1×10 2 M -1 and K21 = 4×10 2 M -1 The binding constants of 1 are larger than those of 2 →The size of the cavity of 1 is suitable for trapping of tropylium cation. > K11(1:1)K21(2:1) 13 × × × ×10 2 K is complex formation constant : 錯形成定数 1 2

Self-Assembly of Butadiyne-Bridged Pyridinophane 8

Scanning Tunneling Microscopy (STM) 9 Tunneling current electron Tunneling current Tip Sample Tip Sample

Guest Inclusion Ability of Butadiyne- Bridged Pyridinophane on Solid Surfaces 10 The brighter spots within the cavity of 1 are trapped tropylium cations. An empty macrocycle 1 + R = COOC 8 H 17 1

Introduction of Paper 11 cyclo[12]thiophene fullerene Bu ≡ 〜

Previous work of Monolayer of C[12]T 12

Previous work of Monolayer of C[12]T 13 ・ The individual rings appeared in bright features ・ The interior cavity and the insulating alkyl side chains appeared darker in the image

Previous work of Monolayer of C[12]T 14 ・ The individual rings appeared in bright features ・ The interior cavity and the insulating alkyl side chains appeared darker in the image

Previous work of Monolayer of C[12]T 15 Top view Side view “spider-like” comformation

About Thiophene 16 Cyclic π-conjugated cyclothiophene self-assembles at the solid-liquid interface to form well-ordered 2D molecular network. C[12]T : cyclo[12]thiophene fullerenes C[12]T The formation of 1:1 donor–acceptor (D–A) complex p-type (donor) monolayer n-type (acceptor) material charge transfer interaction

Complexation of C[12]T-C ・ An isolated C 60 molecule (white arrow) adsorbed at the liquid/monolayer interface. ・ The electron-accepting C 60 formed a stable 1:1 D–A complex with cyclothiophene. ・ From Semiempirical calculations, the most stable complexation site is at the rim of the macrocycle Providing maximal π–π interaction.

Complexation of C[12]T-C 60 ・ Four individual C 60 fullerenes, labeled “C” (cavity) or “R” (rim), are adsorbed on top of a C[12]T monolayer. ・ A R-type fullerene is imaged brighter, the three C-type fullerenes can be observed as rather diffuse spots. 18

Complexation of C[12]T-C 60 During scanning, the C-type fullerenes were desorbed There are two types of fullerenes (R diameter ∼ 1 nm versus C diameter ∼ 1.6 nm) The C-type is not immobilized, but rather rotates around an axis perpendicular to the substrate. 19 a complexation site on top of the conjugated “rim”is stable position

Complexation of C[12]T-C Complexes with more than one fullerene per macrocycle were never seen The fullerenes interact with the cyclothiophenes at the same position and form perfectly ordered domains. The C[12]T monolayer acts as a veritable template The complexation ratio is exclusively 1:1.

The 1:1 D–A complex 21 ・ The electron density of macrocycle’s HOMO is drastically shifted by the complexation of C 60. ・ It becomes unfavorable when C 60 occupy the electron-deficient part of the C[12]T macrocycle. The macrocycle can form complex with fullerenes.

Scanning tunneling Spectroscopy (STS) 22 STS provides a useful tool in the study of the electrical properties of molecular monolayer. On the sample, it can detect the tunneling current by changing of the bias voltages, which probe the local density of electronic states (LDOS) and the band gap of surfaces and materials on surfaces at the atomic scale. The I(V) and dI/dV data refrect the conductivity of organic molecules may be changed in a variety of ways. dI/dV ∝ LDOS

The electrical properties of C[12]T 23 The asymmetric I–V curve was observed. The asymmetry is clearly seen in the differential curve (dI/dV–V) The frontier orbitals of the system were localized at -0.7 and 0.95 V, below and above the Fermi level, respectively. C[12]T C[12]T–C 60 complex C[12]T The general p-doping character of electron-rich thiophene compounds. HOMO–LUMO gap is 1.65 V. Relate to the local density of states (LDOS) of the molecule.

The electrical properties of C[12]T–C 60 complex 24 The shape of the I–V curve at positive bias is very similar to the non-complexed macrocycle. However at negative bias the current behavior is quite different. From the differential (dI/dV–V) curve, a bigger gap between the frontier orbitals (1.85 V) T he shift of the HOMO to higher voltages (–0.9 V) C[12]T C[12]T–C 60 complex The saturation of the current at negative bias is a special spectroscopic characteristic of the D–A complex. The typical exponential behavior of the tunneling current in semiconductors is blocked starting at a value of –1.06 V. C[12]T–C 60 complex

Summary self-assembled and highly ordered monolayers of macrocyclic thiophenes C[12]T can be used as template to epitaxially grow 3D nanoarchitectures with C60-fullerenes. Submolecularly resolved STM images allow the investigation of unique 1:1 complexes comprising a ring- shaped p-type and a spherical n-type semiconductor. The dynamics of C60 adsorption and the complexation site on the macrocycle have been analyzed by STM The electronic properties of the complexes have been elucidated by means of STS showing interesting saturation behavior in the I–V curves. 25

Purpose of My Work 26 ・ Formation of 2D molecular networks on the solid surface. ・ Guest inclusion ability toward larger guest molecule ・ Synthesis of butadiyne-bridged pyridinophane which possesses a larger cavity ・ Evaluation of its guest inclusion ability guest host -My purpose-

Purpose of My Work 27 ・ Synthesis of butadiyne-bridged pyridinophane which possesses a larger cavity ・ Evaluation of its guest inclusion in solution and on surface.

Synthesis of Butadiyne-Bridged Pyridinophane 28

Synthesis of Butadiyne-Bridged Pyridinophane 29 Route 1 Route 2

Summary The molecular network of macrocycles would serve as an appropriate template layer for guest adsorption A purpose of my work is to synthesize butadiyne-bridged pyridinophane which possesses a larger cavity and evaluate its guest inclusion. 30