BUILDING HIGHWAYS IN THE INFORMATICS LANDSCAPE Ed Baker 10.6084/m9.figshare.749699.

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Presentation transcript:

BUILDING HIGHWAYS IN THE INFORMATICS LANDSCAPE Ed Baker /m9.figshare

We need to move from this…

…to this

HOW?

All of these systems: Have different data models Are written in different programming languages Are mutually incompatible

How do we make these systems talk? Requirements

How do we make these systems talk? Requirements Each pair can define a way of communicating with each other

How do we make these systems talk? Requirements

How do we make these systems talk? Requirements

We need a lingua franca of biodiversity informatics Requirements

We need a lingua franca of biodiversity informatics Requirements Any language that is widely used as a means of communication among speakers of other languages.

Requirements Common Intermediary

Easily understood People Machines Easy to share Using existing technology and infrastructure Requirements

Easily understood People Machines Easy to share Using existing technology and infrastructure Can read in Excel Requirements

Easily understood People Machines Easy to share Using existing technology and infrastructure Can read in Excel Everything precisely defined Requirements

Easily understood People Machines Easy to share Using existing technology and infrastructure Can read in Excel Everything precisely defined Standard formats: csv, zip Standard delivery: via the web Standard formats: csv, zip Standard delivery: via the web Requirements

Core File (classification) Core File (classification)

Core File (classification) Core File (classification) Images Literature Specimens Taxonomic treatments

Core File (classification) Core File (classification) Images Literature Specimens Taxonomic treatments

Core File (classification) Core File (classification) Images Literature Specimens Taxonomic treatments STAR SCHEMA

Core File (classificati on) Core File (classificati on) Images Literature Specimens Taxonomic treatments Meta.xml

Core File (classificati on) Core File (classificati on) Images Literature Specimens Taxonomic treatments Meta.xml What is each file? What does each column in a file contain? What is each file? What does each column in a file contain?

Core File (classificati on) Core File (classificati on) Images Literature Specimens Taxonomic treatments Meta.xml dwca.zip

WHAT’S THE BENEFIT?

dwca.zip

?

These images came from the Scratchpad

So did this description

This map didn’t

Aggregators allow us to… provide a single user interface to many different systems. search easily across multiple datasets simultaneously (and combine results).

You can also share data with …

ANY OF THE INCREASING NUMBER OF PEOPLE WHO SUPPORT THE STANDARD