PULSED-FIELD IONIZATION ELECTRON SPECTROSCOPY OF Al-URACIL COMPLEX Sergiy Krasnokutski and Dong-Sheng Yang University of Kentucky, Lexington, KY 40506,

Slides:



Advertisements
Similar presentations
PREFERRED METAL BINDING SITE OF ANILINE SUDESH KUMARI, BRAD SOHNLEIN, DILRUKSHI HEWAGE, and DONG-SHENG YANG University of Kentucky, Lexington, KY
Advertisements

IR-UV PHOTOIONIZATION AND DEPLETION SPECTROSCOPY OF Al- AND Cu-ETHYLENEDIAMINE COMPLEXES Yuxiu Lei, Jung Sup Lee, and Dong-Sheng Yang Department of Chemistry,
Modification of the Prolyl Ring of Val-Pro-Ala and the Impact of this Modification on b 2 Ion Structure Matthew Bernier, Julia Chamot-Rooke, Ashley Gucinski,
Ryunosuke Shishido, Asuka Fujii Department of Chemistry, Graduate School of Science, Tohoku University, Japan Jer-Lai Kuo Institute of Atomic and Molecular.
Sergiy Krasnokutski, Changhua Zhang and Dong-Sheng Yang University of Kentucky, Lexington, KY 40506, USA $ National Science Foundation $
La-Mediated Bond Activation, Coupling, and Cyclization of 1,3-butadiene Probed by Mass-Analyzed Threshold Ionization Spectroscopy Department of Chemistry.
Infrared spectroscopy of Li(methylamine) n (NH 3 ) m clusters Nitika Bhalla, Luigi Varriale, Nicola Tonge and Andrew Ellis Department of Chemistry University.
Structure Determination of Silicon Clusters in the Gas Phase A Vibrational Spectroscopy and DFT Investigation Jonathan T. Lyon, Philipp Gruene, Gerard.
C-O and O-H Bond Activation of Methanol by Lanthanum Atom Ruchira Silva, Dilrukshi Hewage and Dong-Sheng Yang Department of Chemistry University of Kentucky.
1 Influence of Microhydration on the Ionization Energy Thresholds of Thymine University of Southern California Department of Chemistry Kirill Khistyaev,
1 Li Xiao and Lichang Wang Department of Chemistry & Biochemistry Southern Illinois University Carbondale The Structure Effect of Pt Clusters on the Vibrational.
Sergiy Krasnokutski and Dong-Sheng Yang University of Kentucky, Lexington, KY 40506, USA $ National Science Foundation $
Aloke Das Indian Institute of Science Education and Research, Pune Mimicking trimeric interactions in the aromatic side chains of the proteins: A gas phase.
Free O  H Anharmonic Stretching Motions in H  (CH 3 OH) 1  3 with or without Attached Argon 2014/06/19, 10:56-11:11 AM Hsiao-Han Chuang 1 Jer-Lai Kuo.
Vibrational and Geometric Structures of La 3 C 2 O and La 3 C 2 O + from MATI Spectra and ab initio Calculations Mourad ROUDJANE, Lu WU, and Dong-Sheng.
Electronic spectroscopy of Li(NH 3 ) 4 Nitika Bhalla, Luigi Varriale, Nicola Tonge and Andrew Ellis Department of Chemistry University of Leicester UK.
Infrared Photodissociation Spectroscopy of Silicon Carbonyl Cations
OSU Conference 2010: Symposium on Metal Containing Molecules
ENC Practice. If ENC increases, size _____ Size decreases ENC pulls the electrons in tighter, therefore the total size of the atom (created by the electron.
High-resolution threshold photoionization and photoelectron spectroscopy of propene and 2-butyne Julie M. Michaud, Konstantina Vasilatou and Frédéric Merkt.
Pulsed Field Ionization-Zero Electron Kinetic Energy (PFI-ZEKE) Spectroscopy of Sc-C 6 H 5 X(X=F,CH 3,OH) Complexes Changhua Zhang, Serge A. Krasnokutskia.
Infrared Photodissociation Spectroscopy of Aluminum Benzene Cation Complexes Nicki Reishus, Biswajit Bandyopadhyay and Michael A. Duncan Department of.
Nonradiative Decay Dynamics of Methyl-4-hydroxycinnamate and its Monohydrated Complex revealed by Picosecond Pump-Probe Spectroscopy T. Ebata 1, D. Shimada.
Ling Jiang Department of Molecular Physics Fritz-Haber-Institut der Max-Planck-Gesellschaft Faradayweg 4-6, Berlin, Germany 65th International Symposium.
Ionization Energy Measurements and Spectroscopy of HfO and HfO+
Proton Sponges: A Simple Organic Motif for Revealing the Quantum Structure of the Intramolecular Proton Bond H+H+ H+H+ H+H+ H+H+ H+H+ H+H+ H+H+ H+H+ H+H+
Infrared Spectroscopy & Structures of Mass-Selected Rhodium Carbonyl & Rhodium Dinitrogen Cations Heather L. Abbott, 1 Antonio D. Brathwaite 2 and Michael.
Infrared Photodissociation Spectroscopy of TM + (N 2 ) n (TM=V,Nb) Clusters E. D. Pillai, T. D. Jaeger, M. A. Duncan Department of Chemistry, University.
Robert C. Dunbar Case Western Reserve University Nicolas Polfer University of Florida Giel Berden FOM Institute for Plasma Physics Jos Oomens FOM Institute.
Vicki Wysocki (University of Arizona) Probing Influence of Charge on Structures of Protein Complexes with Surface Induced Dissociation and Ion Mobility.
P. D. CARNEGIE, B. BANDYOPADHYAY AND M. A. DUNCAN
Study of the CH 2 I + O 2 Reaction with a Step-scan Fourier-transform Infrared Absorption Spectrometer: Spectra of the Criegee Intermediate CH 2 OO and.
1Department of Chemistry, Wayne State University, Detroit, MI, 48202
HOW DOES SCANDIUM ATOM BIND TO 1-PHENYL NAPHTHALENE? BRADFORD R. SOHNLEIN, JASON F. FULLER, AND DONG-SHENG YANG University of Kentucky Lexington, KY
The Search for an Observable Helium Complex Adrian M. Gardner, Timothy G. Wright and Corey J. Evans.
PFI-ZEKE Spectroscopy of Aluminum-Imidazole and -Pyrimidine Complexes JUNG SUP LEE, XU WANG, SERGIY KRASNOKUTSKI, and DONG-SHENG YANG University of Kentucky.
Infrared Photodissociation Spectroscopy of Aluminum Benzene Cation Complexes Nicki Reishus, Biswajit Bandyopadhyay and Michael A. Duncan Department of.
Infrared Resonance Enhanced Photodissociation of Au + (CO) n Complexes in the Gas Phase Joe Velasquez, III, E. Dinesh Pillai and Michael A. Duncan Department.
Hydrogen-bond between the oppositely charged hydrogen atoms It was suggested by crystal structure analysis. A small number of spectroscopic studies have.
What are the names of these elements? C O Na Li Fe Mg Pb Ca F Xe Ti K Ba B Si P Cl Be.
Main Title Manori Perera 1 and Ricardo Metz University of Massachusetts Amherst 64 th International Symposium on Molecular Spectroscopy June 25th, 2009.
Gas Phase Infrared Spectroscopy of Protonated Species Department of Chemistry University of Georgia Athens Georgia,
PULSED-FIELD IONIZATION ELECTRON SPECTROSCOPY OF LANTHANIDE (Gd, Lu) BENZENE COMPLEXES M. ROUDJANE, S. KUMARI and D.-S. YANG University of Kentucky Lexington,
Infrared Spectra of Anionic Coinage Metal-Water Complexes J. Mathias Weber JILA and Department of Chemistry and Biochemistry University of Colorado at.
Ce-Promoted Bond Activation of Ethylene Probed by Mass-Analyzed Threshold Ionization Spectroscopy Department of Chemistry University of Kentucky, Lexington,
Periodic Properties of the Elements © 2009, Prentice-Hall, Inc. Chapter 7 Periodic Properties of the Elements.
Velocity Map Imaging Study of a Mass-Selected Ion Beam: the Photoinitiated Charge-Transfer Dissociation of and Ag + (C 6 H 6 ) Jonathon A. Maner, Daniel.
Tridentate Binding Structure of Cu-(2,2:6,2  -Terpyridine) XU WANG and DONG-SHENG YANG Department of Chemistry, University of Kentucky, Lexington, KY,
The Rotational Spectrum of the Water–Hydroperoxy Radical (H 2 O–HO 2 ) Complex Kohsuke Suma, Yoshihiro Sumiyoshi, and Yasuki Endo Department of Basic Science,
Mass-Analyzed Threshold Ionization of Lu 2 Lu Wu, Mourad Roudjane, Dong-Sheng Yang Department of Chemistry University of Kentucky Lexington, KY, 40504,USA.
Electronic Spectroscopy of the 6p ← 6s Transition in Au–Ne Adrian M. Gardner, Richard J. Plowright, Carolyn D. Withers, Timothy G. Wright, Michael D. Morse.
Gas Phase Infrared Spectroscopy of Mass Selected Carbocations Department of Chemistry University of Georgia Athens Georgia, 30602
Department of Chemistry, University of Kentucky, Lexington, KY, 40506
Wei Li, Mingfei Zhou Fudan University , Shanghai, China
Probing the vibrational spectroscopy of the deprotonated thymine radical by photodetachment and state-selective autodetachment photoelectron spectroscopy.
Clam Structures of Metal-Biphenyl Complexes: M-C12H10 (M = Sc, La, Ti)
Wei Li, Mingfei Zhou Fudan University, Shanghai, China
Review – What have you learned?
Mass-Analyzed Threshold Ionization Spectroscopy
Department of Chemistry University of Kentucky
Metal ion induced pairing of cytosine bases
A Theoretical Search for an Electronic Spectrum of the He–BeO Complex
Nucleic Acids.
Free Energy of Catalytic Reactions by Density Functional Theory
Title: Nucleic Acids
C-H Bond Activation of Butenes
Spectroscopy, Structure, and Ionization Energy of BeOBe
Learning Objectives Learn the Base Pairs of DNA
Ions.
Department of Chemistry University of Kentucky
Presentation transcript:

PULSED-FIELD IONIZATION ELECTRON SPECTROSCOPY OF Al-URACIL COMPLEX Sergiy Krasnokutski and Dong-Sheng Yang University of Kentucky, Lexington, KY 40506, USA $ National Science Foundation $

Motivation: metal interaction with structural components of nucleic acids

Background 1. a) M.T. Rodgers et al., J. Am. Chem. Soc. 2000, 122, b) B.A. Cerda et al., J. Am. Chem. Soc. 1996, 118, a) D.B. Pedersen et al., J. Am. Chem. Soc. 2002, 124, b) D.B. Pedersen et al., J. Phys. Chem. A 2003, 107, S. Hoyau et al., J. Am. Chem. Soc. 1999, 121, Threshold collision-induced dissociation a) Li +, Na +, K + with uracil, thymine, and adenine b) Li +, Na +, and K + binding to the DNA and RNA nucleobases. 2. Photoionization efficiency spectra a b Al-Cytosine Al-Guanine Na + (Uracil ) + Xe

Tautomers and Energies (kcal/mol) of Uracil N1O2,  E=19.9 (19.8) 1,  E=0 N3O4,  E=12.4 (12.1) N1O4,  E=21.9 (21.8)N3O2,  E=19.8 (19.8) N1N3,  E=15.0 (14.4)N1N3`,  E=13.8 (14.2) N1O2`,  E=11.6 (11.4) B3LYP/6-311+G(d,p) (B3P86/6-311+G(d,p)) B3LYP/6-311+G(d,p) (B3P86/6-311+G(d,p))

N1O2N1,  E=34.7 (34.2)N3O4N3,  E=11.0 (8.5)N1O4N1,  E=13.0 (10.8) N3O2N3,  E=14.4 (13.2) 1O4,  E=0 1O2,  E=18.0 (18.2)1CC,  E=23.4 (20.3) N1N3N1,  E=26.1 (26.2) N1N3N3,  E=29.3 (28.9) Tautomers and Energies (kcal/mol) of Al-Uracil B3LYP/6-311+G(d,p) (B3P86/6-311+G(d,p)) B3LYP/6-311+G(d,p) (B3P86/6-311+G(d,p))

1O2,  E=6.5 (6.3) N1O2N1,  E=30.0 (33.9) N3O4O2,  E=6.8 (6.5) N1O4O2,  E=10.0 (9.7) N3O2O4,  E=4.5 (4.3) 1O4,  E=0 N1N3N3,  E=27.6 (27.7) N1N3N1,  E=18.1 (18.1) Tautomers and Energies (kcal/mol) of Al + -Uracil B3LYP/6-311+G(d,p) (B3P86/6-311+G(d,p)) B3LYP/6-311+G(d,p) (B3P86/6-311+G(d,p))

Al + Stabilization of High Energy Tautomers  E (kcal/mol) 0 1 N3O UracilAl + Uracil N1O2` O4 N1O2N1 N3O2O4 4.5

ZEKE Experimental Setup

Mass and PIE Spectra of Al-Uracil

Experimental and Simulated Spectra of Al  Uracil Tautomers B3LYP/6-311+G(d,p) IE=43261 cm -1 IE=43064 (7) cm -1 IE=39087 cm -1 IE=39908 cm -1 IE=41152 cm -1

Experimental and Simulated Spectra 303experimentB3LYPB3P Vibrational intervals (cm -1 )

Experimental and Simulated Spectra

Li-Thymine and Li-Uracil Complexes IE = 33386(7) IE = 33910(7)

 Metal binding to the O4 atom of uracil and thymine.  Density functional theory gives good agreement with the experiment.  Al + ion stabilizes unusual tautomeric forms. Conclusions