PLS’09 Beijing, China, September 7, 2009 Sponsored by US Army Research Office STIR: Advanced Estimation of Cognitive Status Contract No. W911NF-08-C-0121.

Slides:



Advertisements
Similar presentations
FMRI Methods Lecture 10 – Using natural stimuli. Reductionism Reducing complex things into simpler components Explaining the whole as a sum of its parts.
Advertisements

ACI/HFES, Baltimore, October 1-3, 2007 Sponsored by US Army Research Office SBIR Phase II: Wearable Physiological Sensor Suite For Early Detection Of Cognitive.
PLS’09 Beijing, China, September 7, 2009 Sponsored by US Army Research Office STIR: Advanced Estimation of Cognitive Status Contract No. W911NF-08-C-0121.
Tensors and Component Analysis Musawir Ali. Tensor: Generalization of an n-dimensional array Vector: order-1 tensor Matrix: order-2 tensor Order-3 tensor.
Informatics and Mathematical Modelling / Intelligent Signal Processing 1 Morten Mørup Decomposing event related EEG using Parallel Factor Morten Mørup.
Poster Design & Printing by Genigraphics ® Leonard J. Trejo, Ph. D. Roman Rosipal, Ph. D Pacific Development and Technology, LLC Paul L.
S-SENCE Signal processing for chemical sensors Martin Holmberg S-SENCE Applied Physics, Department of Physics and Measurement Technology (IFM) Linköping.
São Paulo Advanced School of Computing (SP-ASC’10). São Paulo, Brazil, July 12-17, 2010 Looking at People Using Partial Least Squares William Robson Schwartz.
Chapter 11: Mental Workload, Stress and Individual Differences: Cognitive and Neuroergonomic Approaches Slide Template.
© MIT AgeLab 2009 Technology Makes Things Easier Bryan Reimer MIT AgeLab & New England University Transportation Center Edmunds’ Safety Conference: Truly.
Principal Component Analysis
1 Affective Learning with an EEG Approach Xiaowei Li School of Information Science and Engineering, Lanzhou University, Lanzhou, China
Dimensional reduction, PCA
Spike-triggering stimulus features stimulus X(t) multidimensional decision function spike output Y(t) x1x1 x2x2 x3x3 f1f1 f2f2 f3f3 Functional models of.
Un Supervised Learning & Self Organizing Maps Learning From Examples
Dimension reduction : PCA and Clustering Slides by Agnieszka Juncker and Chris Workman.
Independent Component Analysis (ICA) and Factor Analysis (FA)
1 Haskins fMRI Workshop Part III: Across Subjects Analysis - Univariate, Multivariate, Connectivity.
Dimension reduction : PCA and Clustering Christopher Workman Center for Biological Sequence Analysis DTU.
Some Statistics Stuff (A.K.A. Shamelessly Stolen Stuff)
Discussion Section: Review, Viirre Lecture Adrienne Moore
General Linear Model & Classical Inference
Measuring Functional Integration: Connectivity Analyses
NUS CS5247 A dimensionality reduction approach to modeling protein flexibility By, By Miguel L. Teodoro, George N. Phillips J* and Lydia E. Kavraki Rice.
Presented By Wanchen Lu 2/25/2013
1 Robust HMM classification schemes for speaker recognition using integral decode Marie Roch Florida International University.
Next. A Big Thanks Again Prof. Jason Bohland Quantitative Neuroscience Laboratory Boston University.
Comparison of Boosting and Partial Least Squares Techniques for Real-time Pattern Recognition of Brain Activation in Functional Magnetic Resonance Imaging.
Ilmenau University of Technology Communications Research Laboratory 1  A new multi-dimensional model order selection technique called closed- form PARAFAC.
Physiological sensors and EEG A short introduction to (neuro-)physiological measurements.
EEG Classification Using Maximum Noise Fractions and spectral classification Steve Grikschart and Hugo Shi EECS 559 Fall 2005.
A Tensorial Approach to Access Cognitive Workload related to Mental Arithmetic from EEG Functional Connectivity Estimates S.I. Dimitriadis, Yu Sun, K.
Gap-filling and Fault-detection for the life under your feet dataset.
Analysis of Movement Related EEG Signal by Time Dependent Fractal Dimension and Neural Network for Brain Computer Interface NI NI SOE (D3) Fractal and.
Modelling, Analysis and Visualization of Brain Connectivity
Motivation Increase bandwidth of BCI. Reduce training time Use non invasive technique.
CMU SCS KDD '09Faloutsos, Miller, Tsourakakis P5-1 Large Graph Mining: Power Tools and a Practitioner’s guide Task 5: Graphs over time & tensors Faloutsos,
Blind Information Processing: Microarray Data Hyejin Kim, Dukhee KimSeungjin Choi Department of Computer Science and Engineering, Department of Chemical.
Pattern Classification of Attentional Control States S. G. Robison, D. N. Osherson, K. A. Norman, & J. D. Cohen Dept. of Psychology, Princeton University,
The geometry of the system consisting of the hyperbolic mirror and the CCD camera is shown to the right. The points on the mirror surface can be expressed.
Introduction to Linear Algebra Mark Goldman Emily Mackevicius.
Conjunct COST B27 and SAN Scientific Meeting, Swansea, UK, September 2006.
Principal Component Analysis (PCA)
Principal components analysis (PCA) as a tool for identifying EEG frequency bands: I. Methodological considerations and preliminary findings Jürgen Kayser,
Feature Selection and Extraction Michael J. Watts
Multivariate time series analysis Bijan Pesaran Center for Neural Science New York University.
Dr. Ali Saad modified from Dr. Carlos Davila Southe. metho univ 1 EEG Brain signal measurement and analysis 414BMT Dr Ali Saad, College of Applied medical.
D AVIDSSON ET AL L ONG - TERM MEDITATORS SELF - INDUCE HIGH - AMPLITUDE GAMMA SYNCHRONY DURING MENTAL PRACTICE Background: Practitioners understand.
A direct comparison of Geodesic Sensor Net (128-channel) and conventional (30-channel) ERPs in tonal and phonetic oddball tasks Jürgen Kayser, Craig E.
Chapter 15: Classification of Time- Embedded EEG Using Short-Time Principal Component Analysis by Nguyen Duc Thang 5/2009.
Integration of EEG, DC/SCP, and Peripheral Measures in Biofeedback
Correspondence between Brain Waves and Human Trust using EEG in Autonomous System Seeung Oh.
Jinbo Bi Joint work with Tingyang Xu, Chi-Ming Chen, Jason Johannesen
Large Graph Mining: Power Tools and a Practitioner’s guide
Database management system Data analytics system:
Estimation Techniques for High Resolution and Multi-Dimensional Array Signal Processing EMS Group – Fh IIS and TU IL Electronic Measurements and Signal.
Integration of EEG, DC/SCP, and Peripheral Measures in Biofeedback
When to engage in interaction – and how
Application of Independent Component Analysis (ICA) to Beam Diagnosis
Principal Component Analysis
Experimental Design in Functional Neuroimaging
spike-triggering stimulus features
Dimension reduction : PCA and Clustering
Introduction to Connectivity Analyses
Attentional Modulations Related to Spatial Gating but Not to Allocation of Limited Resources in Primate V1  Yuzhi Chen, Eyal Seidemann  Neuron  Volume.
Monica W. Chu, Wankun L. Li, Takaki Komiyama  Neuron 
EECS Department, UC Berkeley
Feature Selection in BCIs (section 5 and 6 of Review paper)
Mental workload The ratio between a task’s demand and the persons’s capacity Too high workload leads to stress, reduced performance, errors Too low workload.
Dimensionality Reduction Part 1 of 2
Presentation transcript:

PLS’09 Beijing, China, September 7, 2009 Sponsored by US Army Research Office STIR: Advanced Estimation of Cognitive Status Contract No. W911NF-08-C SEP-2008 TO14-MAR-2009 PLS Tools in Electroencephalography Leonard J. Trejo PDT Institute Palo Alto, CA 94303, USA The 6 th International Conference on Partial Least Squares and Related Methods Sept. 4 th – 7 th, 2009 Beijing, China

PLS’09 Beijing, China, September 7, 2009 PDT and PDT Institute PDT Neuroergonomics Models and Applications Human-System Integration Human Performance Optimization Robust Biomedical Signal Processing Embedded and Real-time Systems for Bio-Sensing PDT Institute PhD/Masters/Undergraduate Training University Partners (UC Santa Cruz, Tsinghua University, UC San Diego, Univ. of West Florida)

PLS’09 Beijing, China, September 7, 2009 When I am not working…

PLS’09 Beijing, China, September 7, 2009 Outline Problem: stress, workload, fatigue and performance Response: Neuroergonomic models and control systems –Create useful definitions of cognitive states –Model, estimate and control cognitive states Background –Multimodal sensor-state models using PLS and KPLS Algorithms –Successes and failures: fatigue / BCI / engagement / workload New directions –Truly multidimensional sensor-process models –PARAFAC, N-PLS Summary

PLS’09 Beijing, China, September 7, 2009 Estimation of Cognitive States Other States Behavior and Performance Other Processes Internal Processes Biosignals

PLS’09 Beijing, China, September 7, 2009 Useful Definitions Engagement: selection of a task as the focus of attention and effort Workload: significant commitment of attention and effort to an engaged task Visual, Auditory, Haptic Psychomotor Cognitive (memory, executive) Overload: task demands outstrip performance capacity Mental Fatigue: desire to withdraw attention and effort from an engaged task associated with extended performance (~45 min) General Cognitive Status Work- load Mental Fatigue Non- specific Factors Engage- ment

PLS’09 Beijing, China, September 7, 2009 Electroencaphalogram Cerebral Cortex the outermost layers of brain 2-4 mm thick (human)

PLS’09 Beijing, China, September 7, 2009 EEG Sources A pyramidal neuron with a soma, apical & basal dendrites and a single axon

PLS’09 Beijing, China, September 7, 2009 EEG Sources A pyramidal neuron with a soma, apical & basal dendrites and a single axon

PLS’09 Beijing, China, September 7, 2009 Other Elements of Sensor-State Models ModalityEffect of Workload Heart rateIncrease Heart rate variability (and HFQRS)Decrease Vertical and horizontal EOG (eye movements) Increase BlinksMay decrease for intake Pupil diameterIncrease Skin conductance, SCR, GSRIncrease EMG (frontalis, temporalis, trapezius)Increase

PLS’09 Beijing, China, September 7, 2009 Successful Application 1: Mental Fatigue Black = Alert Red = Mentally Fatigued Fz Pz Frontal Theta Parietal Alpha

PLS’09 Beijing, China, September 7, 2009

Successful Application 2: BCI

PLS’09 Beijing, China, September 7, 2009 Successful Application 2: BCI

PLS’09 Beijing, China, September 7, 2009 Stress, Workload, Fatigue and Performance Trejo, et al. ACI 2007

PLS’09 Beijing, China, September 7, 2009 Cognitive Overload (Trejo, et al. ACI 2007) Trejo, et al. ACI 2007

PLS’09 Beijing, China, September 7, 2009 Stabilizing Classifiers

PLS’09 Beijing, China, September 7, 2009 Multimodal Overload Patterns Time (s) Value

PLS’09 Beijing, China, September 7, 2009 Workload-related EEG Sources Passive viewing: theta alpha Engaged 5: theta alpha

PLS’09 Beijing, China, September 7, 2009 Application Summary Individual models of engagement and fatigue: % accurate Stable within a day Stable from day to day Individual models of workload or effort: 60-90% accurate Moderately stable within a day Unstable from day to day Normative models (limited data): 50-70% accurate Moderately stable

PLS’09 Beijing, China, September 7, 2009 Recommended Directions 1.Deployable multimodal sensors ( EEG, fNIR, EOG, gaze, HRV, EMG, SCR, SpO 2, BP, core body temperature, gesture, posture facial expression,...) 2.Multimodal experimental designs and operational tests 3.Advanced neurocognitive process models 4.Multimodal sensor-process mapping algorithms APECS

PLS’09 Beijing, China, September 7, 2009 “Atomic” Decomposition “In the parlance of modern harmonic analysis (Chen and Donoho, 2001), we performed a space/ frequency/time ‘‘atomic decomposition’’ of multidimensional data. In other words, we assume that each neural mass contributes a distinctive atom to the topographic frequency/time description of the EEG, so that the estimation of these atoms is possible by means of signal- processing techniques. Each atom will be defined by its topography, spectral content, and time profile; in other words, by its spatial, spectral, and temporal signatures.” Fumikazu Miwakeichi, et al, Decomposing EEG data into space–time–frequency components using Parallel Factor AnalysisNeuroImage 22 (2004) 1035–1045. Chen, S., Donoho, D., Atomic decomposition by basis pursuit. SIAM Rev. 43, 129– 159.

PLS’09 Beijing, China, September 7, 2009 “Atomic” EEG Elements Atoms Molecule Basic Sources “atoms” Coherent Systems “molecules” Coherence Bonds Covalent Bonds

PLS’09 Beijing, China, September 7, 2009 “Molecular” EEG Processes Coherence Bonds Atoms

PLS’09 Beijing, China, September 7, 2009 Familiar (bilinear) Mapping Algorithms Factor Analysis Principal Component Analysis (PCA) afaf bfbf

PLS’09 Beijing, China, September 7, 2009 Multimodal Mapping How to generalize bilinear models to systems with more dimensions? 1.Unfolding a bilinear model a.Represent all experimental factors in one dimension b.Observations (trials) is second dimension c.Contrast each dimension vs. pairs of the other two 2.Multidimensional model a.Assume orthogonal factors: PARAFAC b.Allow interacting factors: Tucker 3 3.Modeling approach a.Unsupervised extraction: PARAFAC, CANDECOMP, Tucker 3 b.Supervised extraction: N-PLS

PLS’09 Beijing, China, September 7, 2009 Unfolding a Bilinear Model Unfolding Dim 1 Dim 2Dim 3 Dim 2 & 3 X X X1X1 X2X2 X3X3 Dim 1 & 3 Dim 1 & 2

PLS’09 Beijing, China, September 7, 2009 Multidimensional Modeling (Tucker 3 Model, unsupervised) x ijk is an element of (l x m x n) multidimensional array F1, F2, F3 are the number of components extracted on the 1st, 2nd and 3rd mode a, b, c are elements of the A, B, C loadings matrices for the 1st, 2nd and 3rd mode g are the elements of the core matrix G which defines how individual loading vectors in different modes interact e ijk is an error element (unexplained variance)

PLS’09 Beijing, China, September 7, 2009 PARAFAC ( Parallel Factor Analysis, unsupervised ) afaf bfbf cfcf PARAFAC is a special case of the Tucker 3 model where F1= F2 = F3=F and G = I For a 3-way array:

PLS’09 Beijing, China, September 7, 2009 N-way PLS (supervised) X frequency workload condition X afaf cfcf bfbf vfvf ufuf time max. covariance electrodes EEG Labels a f – spectral atom b f – spatial atom c f – temporal atom v f – workload atom u f – temporal atom

PLS’09 Beijing, China, September 7, 2009 Demo: Workload / PARAFAC EEG Workload condtions (e.g., trials, time) Electrodes EEG Frequency

PLS’09 Beijing, China, September 7, 2009 Summary Successes and Failures Individual models of engagement and fatigue: accurate, stable Individual models of workload or effort: variably accurate, unstable Normative models (limited data): inaccurate, unstable Useful models of state-related EEG sources “Atomic” EEG sources “Molecular” EEG systems Approaches to multidimensional models and algorithms Tradtional bilinear methods (PCA, factor analysis, ICA) Truly multidimensional methods Correlated factors (Tucker 3) Uncorrleated factors (PARAFAC, CANDECOMP, N-PLS) Supervised algorithms (N-PLS)

PLS’09 Beijing, China, September 7, 2009 Within-day Results