An Image Filtering Technique for SPIDER Visible Tomography N. Fonnesu M. Agostini, M. Brombin, R.Pasqualotto, G.Serianni 3rd PhD Event- York- 24th-26th.

Slides:



Advertisements
Similar presentations
Ion Heating and Velocity Fluctuation Measurements in MST Sanjay Gangadhara, Darren Craig, David Ennis, Gennady Fiskel and the MST team University of Wisconsin-Madison.
Advertisements

Feedback Reliability Calculation for an Iterative Block Decision Feedback Equalizer (IB-DFE) Gillian Huang, Andrew Nix and Simon Armour Centre for Communications.
Bayesian Belief Propagation
1 Photometric Stereo Reconstruction Dr. Maria E. Angelopoulou.
Chapter 9 PID Tuning Methods.
Image Reconstruction.
An approach to the SN ratios based on
Beam Dynamics in MeRHIC Yue Hao On behalf of MeRHIC/eRHIC working group.
Kevin Kelly Mentor: Peter Revesz.  Importance of Project: Beam stability is crucial in CHESS, down to micron-level precision  The beam position is measured.
INSTITUT MAX VON LAUE - PAUL LANGEVIN Fast Real-time SANS Detectors Charge Division in Individual, 1-D Position- sensitive Gas Detectors Patrick Van Esch.
Soft x-ray tomography on HT-7 tokamak K.Y. Chen, L.Q. Hu, Y.M. Duan HT-7.
1 Remote Engineered Super Resolved Imaging Zeev Zalevsky Faculty of Engineering, Bar-Ilan University, Ramat-Gan, Israel.
WARSAW UNIVERSITY OF TECHNOLOGY INSTITUTE OF HEAT ENGINEERING DIVISION OF AEROENGINES 3-D ELECTRICAL CAPACITANCE TOMOGRAPHY FOR FLAME VISUALIZATION Piotr.
COMPUTER MODELING OF LASER SYSTEMS
Presenter: Yufan Liu November 17th,
Project Overview Reconstruction in Diffracted Ultrasound Tomography Tali Meiri & Tali Saul Supervised by: Dr. Michael Zibulevsky Dr. Haim Azhari Alexander.
1 Cluster Quality in Track Fitting for the ATLAS CSC Detector David Primor 1, Nir Amram 1, Erez Etzion 1, Giora Mikenberg 2, Hagit Messer 1 1. Tel Aviv.
HEAT TRANSPORT andCONFINEMENTin EXTRAP T2R L. Frassinetti, P.R. Brunsell, M. Cecconello, S. Menmuir and J.R. Drake.
tomos = slice, graphein = to write
Outline (HIBP) diagnostics in the MST-RFP Relationship of equilibrium potential measurements with plasma parameters Simulation with a finite-sized beam.
Application of Digital Signal Processing in Computed tomography (CT)
Despeckle Filtering in Medical Ultrasound Imaging
lecture 2, linear imaging systems Linear Imaging Systems Example: The Pinhole camera Outline  General goals, definitions  Linear Imaging Systems.
1 REAL-TIME IMAGE PROCESSING APPROACH TO MEASURE TRAFFIC QUEUE PARAMETERS. M. Fathy and M.Y. Siyal Conference 1995: Image Processing And Its Applications.
Measurements with the KSTAR Beam Emission Spectroscopy diagnostic system Máté Lampert Wigner Research Centre for Physics Hungarian Academy of Sciences.
Edge Neutral Density (ENDD) Diagnostic Overview Patrick Ross Monday Physics Meeting Monday, March19, 2007.
Ursel Fantz for the IPP-NNBI Team 16 th ICIS, New York City, USAAugust 23-28, 2015 Towards 20 A Negative Hydrogen Ion Beams for Up to 1 hour: Achievements.
CS654: Digital Image Analysis Lecture 17: Image Enhancement.
Seeram Chapter 7: Image Reconstruction
Computed Tomography References The Essential Physics of Medical Imaging 2 nd ed n. Bushberg J.T. et.al Computed Tomography 2 nd ed n : Seeram Physics of.
Medical Image Analysis Image Reconstruction Figures come from the textbook: Medical Image Analysis, by Atam P. Dhawan, IEEE Press, 2003.
Digital Image Processing
CIS 601 Image ENHANCEMENT in the SPATIAL DOMAIN Dr. Rolf Lakaemper.
Detection of nerves in Ultrasound Images using edge detection techniques NIRANJAN TALLAPALLY.
Digital Image Processing Lecture 10: Image Restoration March 28, 2005 Prof. Charlene Tsai.
D. Gallagher, M. Adrian, J. Green, C. Gurgiolo, G. Khazanov, A. King, M. Liemohn, T. Newman, J. Perez, J. Taylor, B. Sandel IMAGE EUV & RPI Derived Distributions.
Digital Image Processing Lecture 10: Image Restoration
Development of a Gamma-Ray Beam Profile Monitor for the High-Intensity Gamma-Ray Source Thomas Regier, Department of Physics and Engineering Physics University.
EBEx foregrounds and band optimization Carlo Baccigalupi, Radek Stompor.
Segmentation of Vehicles in Traffic Video Tun-Yu Chiang Wilson Lau.
On the Structure of Magnetic Field and Radioemission of Sunspot-related Source in Solar Active Region T. I. Kaltman, V. M. Bogod St. Petersburg branch.
3.7 Adaptive filtering Joonas Vanninen Antonio Palomino Alarcos.
1 Motion Blur Identification in Noisy Images Using Fuzzy Sets IEEE 5th International Symposium on Signal Processing and Information Technology (ISSPIT.
Hongjie Zhu,Chao Zhang,Jianhua Lu Designing of Fountain Codes with Short Code-Length International Workshop on Signal Design and Its Applications in Communications,
XBSM Analysis - Dan Peterson Review of the optics elements: Pinhole (“GAP”), FZP, Coded Aperture Extracting information from the GAP what is the GAP width?
53rd Annual Meeting of the Division of Plasma Physics, November 13 – November 18, 2011, Salt Lake City, UT Laser Blow-Off Impurity Injection Experiments.
Detection of nerves in Ultrasound Images using edge detection techniques NIRANJAN TALLAPALLY.
Localised Neutron Emission at the edge of high density JET Trace Tritium - ELMy H-mode plasmas A.Murari 6 on the behalf of G. Bonheure 1, S. Popovichev.
Analysis of denoising filters for photo response non uniformity noise extraction in source camera identification Irene Amerini, Roberto Caldelli, Vito.
Image Restoration. Image restoration vs. image enhancement Enhancement:  largely a subjective process  Priori knowledge about the degradation is not.
RT 2009, 15 th May 2009 Pulse Pile-up Recovery Using Model-Based Signal Processing. Paul. A.B. Scoullar, Southern Innovation, Australia. Prof. Rob J. Evans.
ESLS Workshop Nov 2015 MAX IV 3 GeV Ring Commissioning Pedro F. Tavares & Åke Andersson, on behalf of the whole MAX IV team.
Chapter-4 Single-Photon emission computed tomography (SPECT)
M. Kuhn, P. Hopchev, M. Ferro-Luzzi
Evaluation of mA Switching Method with Penalized Weighted Least-Square Noise Reduction for Low-dose CT Yunjeong Lee, Hyekyun Chung, and Seungryong Cho.
Computed Tomography Image Reconstruction
Digital Image Processing Lecture 10: Image Restoration
Degradation/Restoration Model
Diagnosing kappa distribution in the solar corona with the polarized microwave gyroresonance radiation Alexey A. Kuznetsov1, Gregory D. Fleishman2 1Institute.
Spectrophotometric calibration of the IFU spectrograph
Impurity Transport Research at the HSX Stellarator
Image Analysis Image Restoration.
Unfolding Problem: A Machine Learning Approach
Status of Equatorial CXRS System Development
Statistical Deconvolution for Superresolution Fluorescence Microscopy
Adaptive Filter A digital filter that automatically adjusts its coefficients to adapt input signal via an adaptive algorithm. Applications: Signal enhancement.
CIS 4350 Image ENHANCEMENT SPATIAL DOMAIN
Unfolding with system identification
Computed Tomography.
Presentation transcript:

An Image Filtering Technique for SPIDER Visible Tomography N. Fonnesu M. Agostini, M. Brombin, R.Pasqualotto, G.Serianni 3rd PhD Event- York- 24th-26th June 2013

3rd PhD Event- York- 24th-26th June 2013 – Nicola Fonnesu Introduction My research activity is focused on: Optical diagnostics for Neutral Beam (i.e. tomography) Analyses and numerical models dedicated to characterize the ion extraction from the source, beam optics in the accelerator and beam transport in the injector Fast neutron measurements on RFX (Reversed field pinch device) The ITER Heating Neutral Beam (HNB) injector, based on negative ions accelerated at 1MV, will be tested and optimized in the SPIDER source and MITICA full injector prototypes, using a set of diagnostics not available on the ITER HNB. SPIDER (Full size prototype of the HNB source, ions accelerated at 100 kV) MITICA (Full size prototype of the HNB, ions accelerated at 1 MV)

3rd PhD Event- York- 24th-26th June 2013 – Nicola Fonnesu Tomography: what is it? why is it important in SPIDER ? tomography code and inversion technique The role of instrumental noise in tomography reconstructions Filtering technique in the spatial domain and results Conclusions and future works Outline

3rd PhD Event- York- 24th-26th June 2013 – Nicola Fonnesu What is tomography? Tomography is the reconstruction of a cross-section (or a slice) of an object from its projections (i.e. integral of the image at a given angle). Every projection is made of a large number of lines of sight (LoSs) Fan of LoSs Fan of LoS Fan of LoSs

E/O PC Diagnostic room PC O/E viewport lens CCD beam source 3rd PhD Event- York- 24th-26th June 2013 – Nicola Fonnesu Observing the emission of Hα (Dα) radiation (due to collisions between background gas and ions) on a plane perpendicular to the beam with a set of 3127 lines-of-sight, will allow a tomographic reconstruction of the two dimensional beam emission function, which is proportional to the beam density. SPIDER Visible Tomography Main target: measurement of the beam uniformity with sufficient spatial resolution and of its evolution throughout the pulse duration. The maximum acceptable deviation from beam uniformity is ±10% the deviation of the reconstruction from the real emissivity of the beam has to be sufficiently lower than this value

3rd PhD Event- York- 24th-26th June 2013 – Nicola Fonnesu Inversion technique: the pixel method I j : line-integrated signal of the line j ε i : emissivity of the pixel i a i,j : fraction of area of pixel i observed by line j SART METHOD PIXEL METHOD From the line integrated measurements we want to obtain the 2D map of the beam emission 1280 beamlets divided into 16 beamlet groups j-th line of sight Integrated Hα (Dα) radiation along the j-th line of sight Emissivity of the beam The unknowns are the emittivities ε i of each pixel i of the image which can be obtained by inverting the matrix a Pixel i

3rd PhD Event- York- 24th-26th June 2013 – Nicola Fonnesu Instrumental noise in the line integrated signals Phantoms (i.e. 2D emissivity profiles) that reproduce different experimental beam configurations (non-uniformity of ±10%, uniform profile, two beamlet groups turned off) are simulated and reconstructed by the tomography code with satisfactory results. ±10% However, if we simulate noisy input data, errors in the reconstructed image shows that noise acts as a limiting factor for the maximum achievable resolution. Reference phantom …adding a random noise (unif. distr., max 20%)

3rd PhD Event- York- 24th-26th June 2013 – Nicola Fonnesu npix Errors in the reconstructed beam profile

3rd PhD Event- York- 24th-26th June 2013 – Nicola Fonnesu Filtering in the spatial domain The filtering algorithm is based on Lees formula [1] that allows to calculate the estimated noise-free pixel intensity just considering its neighborhood: this value will represent the filtered intensity for the corresponding pixel. [1] J.S. Lee, Optical Engineering 25 (5), (1986) Pixel i,j filtered value of the pixel i,j at the step l+1 value of the pixel i,j at the step l local average pixels value at the step l parameter (variance,mean of the pixels neighborhood) Pixels neighborhood is defined by a squared window (5x5 pixels gives better results)

3rd PhD Event- York- 24th-26th June 2013 – Nicola Fonnesu Filtering in the spatial domain In order to minimize the reconstruction errors, the algorithm applies iteratively the Lees formula.

3rd PhD Event- York- 24th-26th June 2013 – Nicola Fonnesu Filtered reconstructions: linear emissivity variation

3rd PhD Event- York- 24th-26th June 2013 – Nicola Fonnesu Filtered reconstructions: constant emissivity

3rd PhD Event- York- 24th-26th June 2013 – Nicola Fonnesu Filtered reconstructions: 2 beamlet groups off The algorithm tends to smooth the boundary of the zero-emissivity area present in the case a beamlet group is switched off, affecting the entire profile. It is necessary to introduce a delta function that allows not to consider pixels with quasi-zero emissivity in the local statistics (for the calculation of the mean of x and k parameter).

3rd PhD Event- York- 24th-26th June 2013 – Nicola Fonnesu Comparison with a low pass filter FFT+ Low Pass (Hann) filter Lees filter

3rd PhD Event- York- 24th-26th June 2013 – Nicola Fonnesu Conclusions The maximum errors (in reconstructions with 640 pixels) are reduced to values up to 3.5% considering different operating conditions of SPIDER. Filtering in the spatial frequency domain could give similar results (for the same level of noise) just considering a lower number of pixels (i.e. 32 or 64). A higher number of pixels can go beyond the simple detection of the lack of uniformity of the beam, giving information about its causes and suggesting possible solutions. Encouraging attempt to demonstrate the feasibility to suppress instrumental noise by a post-processing algorithm that does not increase significantly the processing time.

3rd PhD Event- York- 24th-26th June 2013 – Nicola Fonnesu Future Works Filtering algorithm for MITICA visible tomography Development of the tomography code for N1O (60 kV negative ion source)

3rd PhD Event- York- 24th-26th June 2013 – Nicola Fonnesu THANK YOU FOR YOUR ATTENTION !