“CRISPR genome editing” Precise gene regulation/modification using the simple CRISPR/Cas9 system Thank you. Nucleeases will be used as a new tool that.

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Presentation transcript:

“CRISPR genome editing” Precise gene regulation/modification using the simple CRISPR/Cas9 system Thank you. Nucleeases will be used as a new tool that may revolutionize how we study genes. Story of growing up on the farm. Scientific discovory can be limited be the tools available. Next few slides are a history of the DNA discoveries and tools used to manipulate DNA Jason Kerkvliet, M.S. Research Associate II Hoppe lab March 4, 2014

Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)/Cas9 system

DNA repair mechanisms: gene editing efficiency is enhanced by creating breaks in DNA

How does one use CRISPR? For NHEJ CRISPR vector $65 4 (2 sgRNA sequences) oligos $40 BbsI $70 Total = $175

How does one use CRISPR? For HDR

CRISPR gRNA design tool crispr.mit.edu

CRISPR/Cas9 can be used to edit more than one gene in parallel Wang et al., Cell, 2013

Gene knock-down (siRNA) versus gene knock out Shalem et al., Science 2014

Eliciting gene function using a CRISPR mediated genome screen Shalem et al., Science 2014

http://www.addgene.org/CRISPR/

http://www.addgene.org/CRISPR/plant/