High-resolution tomographic imaging of a human cerebellum: comparison of absorption and grating-based phase contrast by Georg Schulz, Timm Weitkamp, Irene.

Slides:



Advertisements
Similar presentations
Proto-Plasm: parallel language for adaptive and scalable modelling of biosystems by Chandrajit Bajaj, Antonio DiCarlo, and Alberto Paoluzzi Philosophical.
Advertisements

A semi-automated measurement technique for the assessment of radiolucency by E. C. Pegg, B. J. L. Kendrick, H. G. Pandit, H. S. Gill, and D. W. Murray.
ImageJ tutorial showing the operations needed to calculate air-filled porosity for an example soil column.
Validation of Blood Flow Simulations in Intracranial Aneurysms Yue Yu Brown University.
Lag, lock, sync, slip: the many ‘phases’ of coupled flagella by Kirsty Y. Wan, Kyriacos C. Leptos, and Raymond E. Goldstein Interface Volume 11(94):
Dynamic axial crush response of circular honeycombs by Royan J. D'Mello, Sophia Guntupalli, Lucas R. Hansen, and Anthony M. Waas Proceedings A Volume ():rspa
Surface plasmon resonance imaging detection of silver nanoparticle-tagged immunoglobulin by Sharmistha Paul, Deepen Paul, George R. Fern, and Asim K. Ray.
Signal and Noise in fMRI fMRI Graduate Course October 15, 2003.
Using high-resolution displays for high-resolution cardiac data by Christopher Goodyer, John Hodrien, Jason Wood, Peter Kohl, and Ken Brodlie Philosophical.
A novel computational sheep atria model for the study of atrial fibrillation by Timothy D. Butters, Oleg V. Aslanidi, Jichao Zhao, Bruce Smaill, and Henggui.
Predicting crystal growth by spiral motion by Ryan C Snyder, and Michael F Doherty Proceedings A Volume 465(2104): April 8, 2009 ©2009 by The.
University of Ioannina - Department of Computer Science Intensity Transformations (Point Processing) Christophoros Nikou Digital Image.
Presented by: 15 Oct 2001 Neptec Laser Camera System Preliminary Post Flight Results Neptec Design Group.
Secreted, receptor-associated bone morphogenetic protein regulators reduce stochastic noise intrinsic to many extracellular morphogen distributions by.
Echolocating bats emit a highly directional sonar sound beam in the field by Annemarie Surlykke, Simon Boel Pedersen, and Lasse Jakobsen Proceedings B.
In situ chemichromic studies of interactions between a lutetium bis-octaalkyl-substituted phthalocyanine and selected biological cofactors by C. Pal, A.
Geographic profiling applied to testing models of bumble- bee foraging by Nigel E Raine, D. Kim Rossmo, and Steven C Le Comber Interface Volume 6(32):
The role of particle shape on the stress distribution in a sandpile by I Zuriguel, and T Mullin Proceedings A Volume 464(2089): January 8, 2008 ©2008.
More than a safety line: jump-stabilizing silk of salticids by Yung-Kang Chen, Chen-Pan Liao, Feng-Yueh Tsai, and Kai-Jung Chi Interface Volume 10(87):
Spectrally resolved fluorescent lifetime imaging by Quentin S Hanley Interface Volume 6(Suppl 1):S83-S92 February 6, 2009 ©2009 by The Royal Society.
Thermal oscillations in rat kidneys: an infrared imaging study by Alexander M Gorbach, Hengliang Wang, and Eric Elster Philosophical Transactions A Volume.
CT QUALITY MANAGEMENT. SPATIAL RESOLUTION CONTRAST RESOLUTION NOISE IMAGE ARTIFACTS RADIATION DOSE.
Phase Contrast sensitive Imaging
Conclusions Simulated fMRI phantoms with real motion and realistic susceptibility artifacts have been generated and tested using SPM2. Image distortion.
8/Mar./041st Workshopon the Italy-Japan Collaboration on Geant4 Medical Application 1 Use-Case on treatment planning at HIMAC Koichi Murakami KEK 1 st.
Digital Image Processing Part 2 Contrast processing.
Biomarkers from Dynamic Images – Approaches and Challenges
Date of download: 5/29/2016 Copyright © 2016 SPIE. All rights reserved. Experimental setup. (a) Schematic drawing of the optoacoustic translate-rotate.
Date of download: 6/2/2016 Copyright © 2016 American Medical Association. All rights reserved. From: Spectral Domain Optical Coherence Tomography: Ultra-high.
Date of download: 6/3/2016 Copyright © ASME. All rights reserved. From: Quantifying Function in the Early Embryonic Heart J Biomech Eng. 2013;135(4):
Date of download: 6/9/2016 Copyright © 2016 SPIE. All rights reserved. Schematic showing the spatially modulated NIR illumination system. Figure Legend:
Date of download: 9/19/2016 Copyright © 2016 SPIE. All rights reserved. Experimental design. Experimental setup showing laser beam delivery and dual imaging.
Computed Tomography Image Manipulation
From: Discovery of carbon-rich Miras in the Galactic bulge
WP3: Visualization services
Characterization of Flame Retardants in Polymers:
Volume 94, Issue 1, Pages (January 2008)
C. David, IEEE Conference, Rome,
Surface distribution of immunogold‐labelled PS I (A–C) and ATP synthase (D–F) complexes. Surface distribution of immunogold‐labelled PS I (A–C) and ATP.
Characterization and quantification of clonal heterogeneity among hematopoietic stem cells: a model-based approach by Ingo Roeder, Katrin Horn, Hans-Bernd.
Photobleaching-Corrected FRET Efficiency Imaging of Live Cells
Probing Membrane Order and Topography in Supported Lipid Bilayers by Combined Polarized Total Internal Reflection Fluorescence-Atomic Force Microscopy 
Volume 91, Issue 1, Pages 1-13 (July 2006)
Volume 138, Issue 4, Pages (August 2009)
A Bacterium That Can Grow by Using Arsenic Instead of Phosphorus
MRI of articular cartilage in OA: novel pulse sequences and compositional/functional markers  Garry E. Gold, Deborah Burstein, Bernard Dardzinski, Phillip.
Differential Modulation of Cardiac Ca2+ Channel Gating by β-Subunits
Volume 19, Issue 2, Pages (August 1997)
Volume 103, Issue 9, Pages (November 2012)
Measurement accuracy of focal cartilage defects from MRI and correlation of MRI graded lesions with histology: a preliminary study  Chris A McGibbon,
Microtubule Structure at 8 Å Resolution
Hongbo Yu, Brandon J. Farley, Dezhe Z. Jin, Mriganka Sur  Neuron 
Microtubule Structure at 8 Å Resolution
Yong Wang, Paul Penkul, Joshua N. Milstein  Biophysical Journal 
Volume 88, Issue 3, Pages (November 2015)
V. Vetri, G. Ossato, V. Militello, M.A. Digman, M. Leone, E. Gratton 
Volume 109, Issue 12, Pages (December 2015)
Volume 17, Issue 11, Pages (November 2009)
Local and Global Contrast Adaptation in Retinal Ganglion Cells
Volume 110, Issue 4, Pages (February 2016)
P. Müller-Buschbaum, R. Gebhardt, S.V. Roth, E. Metwalli, W. Doster 
Xiaowei Chen, Nathalie L. Rochefort, Bert Sakmann, Arthur Konnerth 
VE-cadherin protein and mRNA are decreased in the retinal vessels of diabetic rats. VE-cadherin protein and mRNA are decreased in the retinal vessels of.
Spatial statistics of X-ray volumes reveal layering and spatially diverse distribution of cell bodies. Spatial statistics of X-ray volumes reveal layering.
Volume 98, Issue 9, Pages (May 2010)
Transaxial sections of contrast-enhanced MRI showing the body and tail of the pancreas (A and B). Transaxial sections of contrast-enhanced MRI showing.
Alexander Spaar, Christian Münster, Tim Salditt  Biophysical Journal 
Synchrotron X-ray imaging provides micron resolution within a neocortical volume. a, Microscopic visualization of cells, blood vessels, and dendrites within.
Disagreement in measuring the solid portion of a part-solid nodule when using different reconstruction algorithms and window settings. Disagreement in.
George D. Dickinson, Ian Parker  Biophysical Journal 
Presentation transcript:

High-resolution tomographic imaging of a human cerebellum: comparison of absorption and grating-based phase contrast by Georg Schulz, Timm Weitkamp, Irene Zanette, Franz Pfeiffer, Felix Beckmann, Christian David, Simon Rutishauser, Elena Reznikova, and Bert Müller Interface Volume 7(53): December 6, 2010 ©2010 by The Royal Society

Top view of the experimental set-up consisting of the detector and the grating interferometer composed of a beam-splitter and an analyser grating. Georg Schulz et al. J. R. Soc. Interface 2010;7: ©2010 by The Royal Society

One reconstructed slice plus the appropriate histogram of the phase-contrast results showing three different strata and several blood vessels (bright regions in the slices that exceed the grey- scale range) of the human cerebellum. Georg Schulz et al. J. R. Soc. Interface 2010;7: ©2010 by The Royal Society

Grating interferometry phase-contrast reconstruction with a grey-scale range corresponding to 34 standard deviations of the formalin peak (a) compared with accordant BW2 absorption- contrast reconstruction with a grey-scale range corresponding to 34 (c) and... Georg Schulz et al. J. R. Soc. Interface 2010;7: ©2010 by The Royal Society

A 100-fold binning of the phase-contrast results reveals the distinction of the spatial resolution between SRµCT and contemporary medical MRT. For that, we assumed a pixel size of 0.5 mm for nowadays common medical high-resolution MR-results. Georg Schulz et al. J. R. Soc. Interface 2010;7: ©2010 by The Royal Society

For the calculation of the spatial resolution, the ratio between rSPstruc of a tomogram ROI with a fine structure and rSPback of a tomogram ROI with background (water) was plotted over spatial frequency. Georg Schulz et al. J. R. Soc. Interface 2010;7: ©2010 by The Royal Society

The phase-contrast three-dimensional rendering of the whole specimen with a virtual cut through it (a,b) demonstrates the feasibility to segment one of the shown structures by simple intensity-based segmentation. Georg Schulz et al. J. R. Soc. Interface 2010;7: ©2010 by The Royal Society

Another phase-contrast three-dimensional rendering of the specimen presumably shows the so- called Purkinje cells. Georg Schulz et al. J. R. Soc. Interface 2010;7: ©2010 by The Royal Society