Christina Leslie, Lonnie Welch, Chairs Gustavo Stolovitzky, Chair Andrea Califano, Chair Steven Leard, Chris Williams Manolis Kellis, Chair Alex Pico,

Slides:



Advertisements
Similar presentations
Statistical methods and tools for integrative analysis of perturbation signatures Mario Medvedovic Laboratory for Statistical Genomics and Systems Biology.
Advertisements

Breast cancer is a complex and heterogeneous disease Tumor samples Protein expression Clinical features Mutational status Adapted from TCGA, Nature 2012.
Who can participate? All SJSU Students –Individuals or in teams –As part of a class project –As members of a student club –As an extracurricular activity.
1 CS 426 / CPE 426 Senior Projects Spring 2009 Course Syllabus January 20, 2009.
Course Syllabus January 24, 2012 CS 426/CPE 426 Senior Projects in Computer Science/Computer Engineering University of Nevada, Reno Department of Computer.
1 CS 426 Senior Projects Spring 2006 Course Syllabus January 24, 2006.
Institute of Cancer Research - Institut du cancer ICR’s Activities in Cancer Imaging.
Opportunities for Scientific Engagement with Program Directors Nas Kuhn, Ph.D. Division of Cancer Biology New Grantee Workshop March 18, 2015
Driving Innovation V Local Energy Systems: Fantastic Opportunity, Fantastic Challenge. Rob Saunders Head of Energy Technology Strategy Board.
WELCOME TO WORKWINWOW ROCKDALE CAREER ACADEMY SEPTEMBER 14, 2012.
How to Manage a High-Volume, Fast-Paced Recruiting Program Using CSO Monica Wilson and Fiona Cooke Dartmouth College’s Center for Professional Development.
NCI Clinical Trials Reporting Program CTRP User Meeting May 2, 2012 Gene Kraus CTRP Program Director.
Zooming Out for a Global View Global Issues Conference Sponsored by the Office of International Outreach, The European Union Center, The Education Department.
A crowdsourcing effort that poses questions (Challenges) about biology, modeling and data analysis: – Transcriptional networks.
Science at the FDA: Update for the Science Board Jesse L. Goodman, MD, MPH Chief Scientist and Deputy Commissioner for Science and Public Health November.
Accelerating business innovation; a Technology Strategy Board programme Research opportunities for e-Science in the UK commercial.
LARA MANGRAVITE SAGE BIONETWORKS ON BEHALF OF THE RA CHALLENGE ORGANIZING TEAM The DREAM Rheumatoid Arthritis Responder Challenge: Motivation, Data, Scoring.
Global Science Collaboratories Workshop 2012 VIVO Conference Workshop August 22-24, 2012 InterContinental, Miami, FL.
An Update of Activities: August Strategic Plan FY2001.
CTRP User Call April 3, 2013 Gene Kraus CTRP Program Director.
Crowdsourcing pharmacogenomic data analysis: PGRN-Sage RA Responder Challenge PGRN Spring Meeting April 30, 2013 HARVARD MEDICAL SCHOOL.
Who can participate? All SJSU Students –Individuals or in teams –As part of a class project, student club, or extracurricular activity Students can submit.
CENTRAL FLORIDA COORDINATION AREA Central Florida Water Initiative Central Florida Water Initiative Regional Water Supply Plan Bill Graf Intergovernmental.
Presenting Your Undergraduate Research Wednesday October 23, 2002 Wozniak Lounge, Soda Hall Sheila Humphreys Sponsored by the Center for Undergraduate.
Sage Bionetworks A non-profit organization with a vision to enable networked team approaches to building better models of disease BIOMEDICINE INFORMATION.
Citizens Social Initiative  Vision …  Motivate the youth to be more responsible & involved citizens  Build both appreciation and demand for good governance.
The Cancer Systems Biology Consortium (CSBC)
 All reviewed by PC and partner journals - Very fast turn around time: 6 weeks - Appear during meeting or soon thereafter  17 accepted.
ANDREA LD ANti-psychotic Drug REduction in primary care for Adults with Learning Disabilities (ANDREA-LD): A Randomised Double-blind Placebo Controlled.
NCI Clinical Trials Reporting Program CTRP User Meeting July 6, 2011 Gene Kraus CTRP Program Director.
1 CS 426 / CPE 426 Senior Projects Spring 2011 Course Syllabus January 19, 2011.
Montgomery County Transition Coordinating Council December 18, 2012 Welcome!
The ICGC-TCGA DREAM Somatic Mutation Calling Challenge Summary November 10, 2014 Dr. Paul C. Boutros Principal Investigator, Informatics & Biocomputing.
Women in Medicine and Science Symposium The Women in Medicine and Science Symposium will highlight the collaborations and achievements of women faculty.
National Center for Supercomputing Applications Barbara S. Minsker, Ph.D. Associate Professor National Center for Supercomputing Applications and Department.
Welcome Thank you March of Dimes for the use of this technology. There are over 400 registered participants for this call. As such, all phones will be.
Sage Bionetworks A non-profit organization with a vision to enable networked team approaches to building better models of disease BIOMEDICINE INFORMATION.
Submit for Evaluation Step 1: Create a Project – You can create a new project on the Synapse home page once you are logged in to hold your work for the.
Linda A. Bailey, JD, MHS How Regional Networks Can Support Quitlines 11/11/2011.
LIVE INTERACTIVE YOUR DESKTOP Wednesday, November 17, 2010 ExploraVision Online Resources.
Pathogenomics How this project began: Ann Rose - take advantage of DNA sequence information - genomics Julian Davies - use the information to understand.
While gene expression data is widely available describing mRNA levels in different cancer cells lines, the molecular regulatory mechanisms responsible.
Training and Outreach Efforts BD2K-LINCS Webinar for the NIH BD2K Working Group on Training May 29, 2015 Avi Ma’ayan, PhD (Contact PI) Associate Professor.
Intel Script Editor Northern Arizona University Computer Science and Engineering Design Conference Presentation Spring 2002 Presented by The ENSCRYPT Team.
Club Officer Training & Toastmasters Leadership Institute October 18, 2015 Carolyn Kaldy, DTM & Lorraine Wheatley ACB, ALB 1313I.
Global Arts Learning Module Info and Access NASC WEBINAR.
ESMD SG Student Project Update PBMA - One stop shopping - ALL ESMD info for:  Space Grant Consortia  Students participating.
12-CRS-0106 REVISED 8 FEB 2013 September 2015 IEEE Technical Activities Volunteer Training IEEE Technical Educational Activities.
RC ICT Conference 17 May 2004 Research Councils ICT Conference The UK e-Science Programme David Wallace, Chair, e-Science Steering Committee.
Third Call for Proposals FAQ session 25 April 2016 Thank you for joining the Q&A session. The presentation will begin at 2pm UK time/4pm IL time (or shortly.
Canadian Bioinformatics Workshops
Towards Integration – A City Framework. “Towards Integration A City Framework a whole city approach to integration. “While management of immigration is.
Talks! Successful Event Promotion with Social Media June 3, 2010 Audio is only available by calling this number: Conference Call: ; Access.
Talks! GrantStation: Your Fast Track to Funding August 11, 2010 Audio is only available by calling this number: Conference Call: ; Access Code:
Introduction to Tulip Day 2014 Tulip Campaign Week is March 3 – 8, 2014 Huron Perth – February
NCI Epidemiology and Genomics Research Program
TMN State Representatives Spring 2017 Conference Call
Research Translation: Lessons from Dissemination and Implementation Research for Interventions Promoting Walking and Walkability August 18, am Pacific,
Creating Cancer Care Teams: A Workshop for Patients and Caregivers
Knowledge Engine for Genomics (KnowEnG):
Dept of Biomedical Informatics University of Pittsburgh
Reflections on Lessons Learned: The Center for Innovative Learning Technologies Roy Pea Stanford University AERA 2003 Chicago, Illinois.
*Food and beverages provided
Nonprofits Rolling Together Conference August 23rd, 2018
SMC CAMPUS CENTER l NOON-1 P.M.
Prepared by: Talal Abu-Ghazaleh Information Technology International
12th – 13th November GRANADA
8:00A.M. – 7:30P.M. Poster & Oral Presentations
Presentation transcript:

Christina Leslie, Lonnie Welch, Chairs Gustavo Stolovitzky, Chair Andrea Califano, Chair Steven Leard, Chris Williams Manolis Kellis, Chair Alex Pico, Barry Demchak, Trey Ideker

 13 Keynote Speakers  63 Oral communications  152 Posters  4 Workshops (2 Cytoscape + 2 DREAM)  DREAM: 368 challenge submissions

A Dialogue on Reverse Engineering Assessment and Methods Great demand from colleagues wishing to share their data challenges led us to organize winter (n+0.5) and spring challenges (n+1)

DREAM was a component of several grants funded in 2014 U54 NIH LINCS Program: Harvard Medical School: Pharmaco Response Signatures and Disease Mechanism OHSU: Extrinsic Perturbations of Cell Physiology and Associated Regulatory Networks U54 DCIC: ISMMS: Data Coordination and Integration Center for LINCS-BD2K Canada NSERC Cancer Genome Collaboratory (the Somatic Mutation Challenges) R21: Univ of Notre Dame: Transcript networks and crowdsourcing to predict drug combinations in malaria parasites And we are also involved in several other submitted grants

We organized the first DREAM Hackathon for the AML Challenge at Rice University Organized over 15 Webinars Two community phases following the competitive phase

DREAM 8.5 and 9 exceeded previous participation

Challenges DREAM Registered Users Leader board Forum Entries Unique Submissions Unique Teams SMC RA AD AML GEP Total

Our association has led to a very productive year Feb 2013

Come to the Workshop Tuesday at 6:45PM (pizza & drinks on us) Synapse: collaborative platform for DREAM Challenges and much more

NCI - DREAM Drug Sensitivity Prediction Challenge (Jun 2014) NCI - DREAM Drug Synergy Prediction Challenge (Dec 2014)

DREAM 7 - ALS Progression Prediction Challenge (Nov 2014) DREAM6+7: Net Inf & Param Estimation Challenge (Feb 2014)

We are organizing several Challenges that we will discuss later today (more info in dreamchallenges.org) DREAM 9.5 (this winter)  ICGC-TCGA DREAM SMC Challenges: RNA and heterogeneity  DREAM Olfaction prediction Challenge  Prostate Cancer Challenge DREAM10 (work in progress, next spring)  ALS Stratification Challenge (Indiegogo campaign)  Drug Synergy Prediction Challenge  Digital Mammography Challenge

Thanks: Conference Sponsors and Journals

Challenge Organizers

Too many thanks to express… The 159 teams that participated and Thea Norman!

There is a crew making a short video on DREAM. Let us know if you don’t want to appear in it. There is a board for posting information, jobs, etc. Take a look (I am looking for a post-doc). There will be a workshop at 6:00PM today, and another at 6:45PM tomorrow. Please write your name in the sheets that are going around to know how many pizzas and beer to order!