Centre for Gene Regulation & Expression College of Life Sciences, University of Dundee Dundee, Scotland, UK Seattle, WA, USA User Experience Team Gus Ferguson.

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Presentation transcript:

Centre for Gene Regulation & Expression College of Life Sciences, University of Dundee Dundee, Scotland, UK Seattle, WA, USA User Experience Team Gus Ferguson The Open Microscopy Environment Using and Adapting the OMERO Training Materials

1 SCOPE

OMERO: Desktop and Web clients 2

OMERO User Help and Training Materials 3

4 WEBSITE

OMERO User Help 5 help.openmicroscopy.org

OMERO Training Materials 6

7 WORKFLOW

Training Materials Workflow 8 o Workflow based o “Minimal Manual” style (sort of) o Version controlled o Part of OME software CI workflow

Training Materials Workflow 9

10

Training Materials Workflow 11

Training Materials Workflow 12

Training Materials Workflow 13

14 RESOURCES

PDF Archive 15

OME Downloads Site 16 downloads.openmicroscopy.org/help/

Word - Hidden Text 17

Image Naming Convention 18

Exporting Images 19

Adapting the Help Website 20 o Uses Jekyll – very easy to learn o Clone the Github repository

License and Re-use 21 All material is covered by the Creative Commons Attribution 3.0 Unported License -you are free to share or adapt content as long as you credit the Open Microscopy Environment -the exception to this is the screenshots and videos which can only be used for non-commercial purposes.

Thanks 22 o Jason Swedlow o Helen Flynn, Petr Walczysko o OME Team o Our funders: