Correlation-Induced Oscillations in Spatio-Temporal Excitable Systems Andre Longtin Physics Department, University of Ottawa Ottawa, Canada.

Slides:



Advertisements
Similar presentations
Introduction to Neural Networks
Advertisements

What is the neural code? Puchalla et al., What is the neural code? Encoding: how does a stimulus cause the pattern of responses? what are the responses.
Lectures 15 and 16 Rachel A. Kaplan and Elbert Heng
Important requirements for JAR: 1.Absolute value of the difference in frequency less than 20 Hz 2. Mixing of signals 3. Variation in mixing ratio 4. Modulation.
Sensorimotor Transformations Maurice J. Chacron and Kathleen E. Cullen.
Purpose The aim of this project was to investigate receptive fields on a neural network to compare a computational model to the actual cortical-level auditory.
Spike Train Statistics Sabri IPM. Review of spike train  Extracting information from spike trains  Noisy environment:  in vitro  in vivo  measurement.
A model for spatio-temporal odor representation in the locust antennal lobe Experimental results (in vivo recordings from locust) Model of the antennal.
Computational neuroethology: linking neurons, networks and behavior Mark E. Nelson Beckman Institute Univ. of Illinois, Urbana-Champaign.
Synchrony in Neural Systems: a very brief, biased, basic view Tim Lewis UC Davis NIMBIOS Workshop on Synchrony April 11, 2011.
Neurophysics Part 1: Neural encoding and decoding (Ch 1-4) Stimulus to response (1-2) Response to stimulus, information in spikes (3-4) Part 2: Neurons.
Introduction: Neurons and the Problem of Neural Coding Laboratory of Computational Neuroscience, LCN, CH 1015 Lausanne Swiss Federal Institute of Technology.
NOISE and DELAYS in NEUROPHYSICS Andre Longtin Center for Neural Dynamics and Computation Department of Physics Department of Cellular and Molecular Medicine.
1 3. Spiking neurons and response variability Lecture Notes on Brain and Computation Byoung-Tak Zhang Biointelligence Laboratory School of Computer Science.
1 Eigenmannia: Glass Knife Fish A Weakly Electric Fish Electrical organ discharges (EODs) – Individually fixed between 250 and 600 Hz –Method of electrolocation.
Part II: Population Models BOOK: Spiking Neuron Models, W. Gerstner and W. Kistler Cambridge University Press, 2002 Chapters 6-9 Laboratory of Computational.
Neural Coding 4: information breakdown. Multi-dimensional codes can be split in different components Information that the dimension of the code will convey.
Biological Modeling of Neural Networks: Week 11 – Continuum models: Cortical fields and perception Wulfram Gerstner EPFL, Lausanne, Switzerland 11.1 Transients.
Last week…. Fourier Analysis Re-writing a signal as a sum of sines and cosines.
CSE 153Modeling Neurons Chapter 2: Neurons A “typical” neuron… How does such a thing support cognition???
The Decisive Commanding Neural Network In the Parietal Cortex By Hsiu-Ming Chang ( 張修明 )
How does the mind process all the information it receives?
Part I: Single Neuron Models BOOK: Spiking Neuron Models, W. Gerstner and W. Kistler Cambridge University Press, 2002 Chapters 2-5 Laboratory of Computational.
Connected Populations: oscillations, competition and spatial continuum (field equations) Lecture 12 Course: Neural Networks and Biological Modeling Wulfram.
Biological Modeling of Neural Networks: Week 15 – Population Dynamics: The Integral –Equation Approach Wulfram Gerstner EPFL, Lausanne, Switzerland 15.1.
Mechanisms for phase shifting in cortical networks and their role in communication through coherence Paul H.Tiesinga and Terrence J. Sejnowski.
Extracting Time and Space Scales with Feedback and Nonlinearity André Longtin Physics + Cellular and Molecular Medicine CENTER FOR NEURAL DYNAMICS UNIVERSITY.
Biological Modeling of Neural Networks Week 8 – Noisy input models: Barrage of spike arrivals Wulfram Gerstner EPFL, Lausanne, Switzerland 8.1 Variation.
Changju Lee Visual System Neural Network Lab. Department of Bio and Brain Engineering.
1 Dynamical System in Neuroscience: The Geometry of Excitability and Bursting پيمان گيفانی.
Methods Neural network Neural networks mimic biological processing by joining layers of artificial neurons in a meaningful way. The neural network employed.
Design constraints for an active sensing system Insights from the Electric Sense Mark E. Nelson Beckman Institute Univ. of Illinois, Urbana-Champaign.
Learning sensorimotor transformations Maurice J. Chacron.
How well do we understand the neural origins of the fMRI BOLD signal? Owen J Arthurs and Simon Boniface Trends in Neuroscience, 2002 Gillian Elizabeth.
Signals CY2G2/SE2A2 Information Theory and Signals Aims: To discuss further concepts in information theory and to introduce signal theory. Outcomes:
Biomedical Sciences BI20B2 Sensory Systems Human Physiology - The basis of medicine Pocock & Richards,Chapter 8 Human Physiology - An integrated approach.
Neural dynamics of in vitro cortical networks reflects experienced temporal patterns Hope A Johnson, Anubhuthi Goel & Dean V Buonomano NATURE NEUROSCIENCE,
The Ring Model of Cortical Dynamics: An overview David Hansel Laboratoire de Neurophysique et Physiologie CNRS-Université René Descartes, Paris, France.
Chapter 7. Network models Firing rate model for neuron as a simplification for network analysis Neural coordinate transformation as an example of feed-forward.
Neural codes and spiking models. Neuronal codes Spiking models: Hodgkin Huxley Model (small regeneration) Reduction of the HH-Model to two dimensions.
Biological Modeling of Neural Networks Week 8 – Noisy output models: Escape rate and soft threshold Wulfram Gerstner EPFL, Lausanne, Switzerland 8.1 Variation.
Study on synchronization of coupled oscillators using the Fokker-Planck equation H.Sakaguchi Kyushu University, Japan Fokker-Planck equation: important.
The Function of Synchrony Marieke Rohde Reading Group DyStURB (Dynamical Structures to Understand Real Brains)
Theoretical Neuroscience Physics 405, Copenhagen University Block 4, Spring 2007 John Hertz (Nordita) Office: rm Kc10, NBI Blegdamsvej Tel (office)
What is the neural code?. Alan Litke, UCSD What is the neural code?
Andre Longtin Physics Department University of Ottawa Ottawa, Canada Effects of Non-Renewal Firing on Information Transfer in Neurons.
Biological Neural Network & Nonlinear Dynamics Biological Neural Network Similar Neural Network to Real Neural Networks Membrane Potential Potential of.
Effect of Small-World Connectivity on Sparsely Synchronized Cortical Rhythms W. Lim (DNUE) and S.-Y. KIM (LABASIS)  Fast Sparsely Synchronized Brain Rhythms.
Three Steps in the Sensation and Perception of a Stimulus
Neural Coding: Integrate-and-Fire Models of Single and Multi-Neuron Responses Jonathan Pillow HHMI and NYU Oct 5, Course.
Biological Modeling of Neural Networks Week 7 – Variability and Noise: The question of the neural code Wulfram Gerstner EPFL, Lausanne, Switzerland 7.1.
Gabrielle J. Gutierrez 1, Larry F. Abbott 2, Eve Marder 1 1 Volen Center for Complex Systems, Brandeis University 2 Department of Neuroscience, Department.
Ch 9. Rhythms and Synchrony 9.7 Adaptive Cooperative Systems, Martin Beckerman, Summarized by M.-O. Heo Biointelligence Laboratory, Seoul National.
Biological Modeling of Neural Networks: Week 15 – Fast Transients and Rate models Wulfram Gerstner EPFL, Lausanne, Switzerland 15.1 Review Populations.
From LIF to HH Equivalent circuit for passive membrane The Hodgkin-Huxley model for active membrane Analysis of excitability and refractoriness using the.
Biological Modeling of Neural Networks: Week 10 – Neuronal Populations Wulfram Gerstner EPFL, Lausanne, Switzerland 10.1 Cortical Populations - columns.
Biological Modeling of Neural Networks Week 10 – Variability and Noise: The question of the neural code Wulfram Gerstner EPFL, Lausanne, Switzerland 10.1.
The Neural Code Baktash Babadi SCS, IPM Fall 2004.
Biological Modeling of Neural Networks Week 11 – Variability and Noise: Autocorrelation Wulfram Gerstner EPFL, Lausanne, Switzerland 11.1 Variation of.
Effects of noisy adaptation on neural spiking statistics Tilo Schwalger,Benjamin Lindner, Karin Fisch, Jan Benda Max-Planck Institute for the Physics of.
Bayesian Brain - Chapter 11 Neural Models of Bayesian Belief Propagation Rajesh P.N. Rao Summary by B.-H. Kim Biointelligence Lab School of.
National Mathematics Day
Volume 30, Issue 2, Pages (May 2001)
Feedback Synthesizes Neural Codes for Motion
Plastic and Nonplastic Pyramidal Cells Perform Unique Roles in a Network Capable of Adaptive Redundancy Reduction  Joseph Bastian, Maurice J Chacron,
Volume 36, Issue 5, Pages (December 2002)
Thomas Akam, Dimitri M. Kullmann  Neuron 
Feedforward, Feedback and Response Variability
Jan Benda, André Longtin, Leonard Maler  Neuron 
Rapid Neocortical Dynamics: Cellular and Network Mechanisms
Presentation transcript:

Correlation-Induced Oscillations in Spatio-Temporal Excitable Systems Andre Longtin Physics Department, University of Ottawa Ottawa, Canada

Co-Workers Brent Doiron Benjamin Lindner Maurice Chacron Physics Department, University of Ottawa Leonard Maler Department of Cellular and Molecular Medicine, University of Ottawa Joseph Bastian Deparment of Zoology, University of Oklahoma

Synopsis Introduction to weakly electric fish Oscillatory activity for communication but not Prey Stimuli Modeling I: Feedback is required Experimental verification Modeling II: stochastic oscillatory dynamics in a spatially extended neural system Doiron, Chacron, Maler, Longtin and Bastian, Nature 421 (Jan 30, 2003)

Weakly Electric Fish

Why study weakly electric fish? (Biology) from molecular to behavioral studies of neural coding peripheral ↔ central feedforward ↔ feedback in vivo ↔ in vitro Stimuli: simple (sines etc…) ↔ natural behaviors: simple ↔ evolved (electrolocation) (electrocommunication)

Why study weakly electric fish? (Mathematical Biology/Biophysics) Single cell dynamics: simple ↔ complex Linear, nonlinear, stochastic (get ready for noise!) Information processing: black box ↔ detailed biophysics  Math, Physics, Neuroscience, Computation Applications: signal detection, novel circuitry, prosthetic design (e.g. with feedback)

Sensory Neurons ELL Pyramidal Cell Sensory Input Higher Brain

Electroreceptor Neurons: Anatomy Pore Sensory Epithelium Axon (To Higher Brain)

Biology: Weakly electric fish

CIRCUITRY Afferent Input Higher Brain Areas The ELL; first stage of sensory processing

Prey Stimuli Electric fish prey on small insects (water fleas). These prey excite only a fraction of the electroreceptors that line the fish’s skin. We label this stimulation geometry local

Communication Stimuli Electric fish communicate by modulating their own electric field, giving a specific input to other fish. These communication calls stimulate the entire surface of the receiving fish’s skin. We label this stimulation geometry global

Pyramidal Cell Response to Prey-like Stimuli AutocorrelationISI Histogram Local Stimuli (Dipole) Fish Random Amplitude Modulations (RAMs) were applied locally to the skin via a small dipole, mimicking prey stimuli. The RAMs were a Gaussian noise process (0-40Hz).

Pyramidal Cell Response to Communication-like Stimuli Global Stimuli AutocorrelationISI HistogramFish RAMs were applied globally to the skin via a large dipole, mimicking communication stimuli. The RAMs were generated by a Gaussian noise process (0-40Hz).

Model Pyramidal Cell We model the ELL pyramidal cell network as an network of Leaky Integrate and Fire (LIF) neurons. The membrane potential of the i th neuron obeys the following dynamics I i (t) – input G(V,t-  d ) – interactions

Pyramidal Cell Interactions – G(t-  d ) The network is coupled through global delayed inhibitory feedback. The inhibitory response is modeled as a fast activating alpha function. dd

Pyramidal Cell Input - I(t) Intrinsic Noise (biased Ornstein-Uhlenbeck process;  =15 ms). Uncorrelated between neurons. External Stimuli (Zero mean band passed Gaussian noise, 0-40Hz). Identical to experiments. Pyramidal Cell I i (t) is composed of two types of “stimuli”

Network Model – Local Input Autocorrelation Histogram To mimic prey stimuli we apply the external stimulus to only one neuron

Network Model – Global Stimuli To mimic communication stimuli we apply the external stimulus to all neurons equally. Autocorrelation Histogram

Oscillation Mechanism Local Stimuli External Stimulus is applied heterogeneously across the network. No stimulus induced correlations. Global Stimuli External Stimulus is applied homogenously across the network. Significant stimulus induced correlations. Correlated activity cause a “wave” of inhibition after a delay. This wave carves out the oscillation.

Electrosensory Circuitry The neural sensory system of weakly electric fish has a well characterized feedback pathway. We applied a sodium channel blocker in order to open the feedback loop.

Experimental Verification ISI HistogramAutocorrelation control block recover

Feedback: Open vs Closed Loop Architecture Higher Brain Higher Brain Loop time  d

Correlated Stimuli in Experiments Dipole 1 Dipole 2 Dipole 3 Dipole 4 The random signal emitted from each dipole was composed of an intrinsic,  i (t), and global source,  G (t). The relative strength of these two sources was parameterized by c, representing the covariance between dipoles.

Correlation Induced Oscillation c=1 c=0.5 c=0 Frequency (Hz) Power

Linear Response Consider the spike train from the i th neuron in our network,. Assuming weak inputs we have that the Fourier transform of the spike train is where A(  is the susceptibility of the neuron determined by the intrinsic properties of the cell. The Fourier transform of the input (external + feedback) is given by X i (  ). (1)

Feedback Input Now consider the globally delay coupled LIF network used earlier. Let the “input” into neuron i be Then it can be shown that for an infinite network we have

Fokker-Planck analysis on noisy Leaky Integrate-and-fire neurons

Shift in Coding Strategies The spike train/stimulus coherence shifts from lowpass to highpass as we transition from local to global stimuli Chacron, Doiron, Maler, Longtin, and Bastian, Nature 423, (May 1 st 2003).

Spike Time Reliability When high-frequency stimuli (40-60 Hz) are given, spike time reliability is increased dramatically when the stimulus is applied globally.

Conclusion  Electric fish use delayed inhibitory feedback to differentially respond to communication vs. prey stimuli.  Our work shows how a sensory system adapts its processing to its environment (local vs. global).