(Bio)Informatics Reference Management: “Defrosting the Digital Library: Bibliographic Tools for the Next Generation Web” (Hull et al, 2008) Paulo Nuin.

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Presentation transcript:

(Bio)Informatics Reference Management: “Defrosting the Digital Library: Bibliographic Tools for the Next Generation Web” (Hull et al, 2008) Paulo Nuin - Nov 3rd 2008

(Bio)Informatics? bi-weekly seminar series on topics ranging from informatics to bioinformatics theme suggestions: website will be setup soon

Reference Management digital libraries - pdfs, PubMed, online journals, JStor, arXiv, etc EndNote, BibTex, RefWorks, etc

Citeulike “CiteULike is a free service to help you to store, organise and share the scholarly papers you are reading. (...) Because your library is stored on the server, you can access it from any computer with an Internet connection.”

Zotero “Zotero is an easy-to-use yet powerful research tool that helps you gather, organize, and analyze sources (citations, full texts, web pages, images, and other objects), and lets you share the results of your research in a variety of ways. (...) And it can be used offline as well.”

Geneious Geneious Pro is an integrated, cross- platform bioinformatics software suite for manipulating, finding, sharing, and exploring biological data such as DNA sequences or proteins, phylogenies, 3D structure information, publications, etc. (...) access to NCBI and UniProt, BLAST, protein structure viewing, automated PubMed searching, and more.

Hull D, Pettifer SR, Kell DB 2008 Defrosting the Digital Library: Bibliographic Tools for the Next Generation Web. PLoS Computational Biology 4(10): e doi: /journal.pcbi