Who am I? Cyndy Parr Ontology Developer Skeptic (middleman & user?) Behavior Semantic Prototypes in Research Ecoinformatics.

Slides:



Advertisements
Similar presentations
Action Plan David Dawson Head of Digital Futures Museums, Libraries and Archives Council.
Advertisements

UMBC an Honors University in Maryland The Semantic Web … It Just Might Work. Joel Sachs Joint work with: Cyndy Parr, Andriy Parafiynyk,
UMBC an Honors University in Maryland Examples of Integrating Ecological Information on the Semantic Web Joel Sachs and Cynthia Simms Parr contact:
From Ontology Design to Deployment Semantic Application Development with TopBraid Holger Knublauch
Trish Rose-Sandler, Missouri Botanical Garden TDWG Oct 2013 Florence Italy Art of Life project Finding a goldmine of natural history illustrations within.
Building and Analyzing Social Networks Web Data and Semantics in Social Network Applications Dr. Bhavani Thuraisingham February 15, 2013.
Gail Hodge Information International Associates, Inc. US Geological Survey, Consultant Joel Sachs Ebiquity Lab, University of Maryland Baltimore County.
COMP 6701 eScience Project Semantic Web for Museums ___ Initial Student : Yan Wang Client/Technical Supervisor : Tom Worthington Academic Supervisor :
Jennifer A. Dunne Santa Fe Institute Pacific Ecoinformatics & Computational Ecology Lab Rich William, Neo Martinez, et al. Challenges.
The Heart of Ecoinformatics at Multiple Scales: Ontologies for Ecological Information Neo Martinez and Rich Williams 1 PEaCE Lab ( Pacific.
Biodiversity Heritage Library by Connie Rinaldo. Overview History EOL/BHL: WHY? Members/Collaborators Process Governance Sustainability: Legal and Financial.
Human-Computer Interaction in Biodiversity Informatics Workshop in association with the 22 nd annual HCIL Symposium and Open House Sponsored by NBII and.
Integrative research using digitized specimens: examples from the Consortium of California Herbaria Brent Mishler University and Jepson Herbaria University.
Practical interoperability across semantic stores of data for blah blah
Beyond a Data Portal: A Collaborative Environment for the Deep Carbon Science Communities Han Wang, Yu Chen, Patrick West, John Erickson, Xiaogang Ma,
The Encyclopedia of Life: A Web Site for Every Species James Edwards Executive Director, EOL Barcode of Life Conference Taipei 20 September 2007.
Data Curation Education and Biological Information Specialists DigCCurr 2007 Chapel Hill, April 20, 2007 P. Bryan Heidorn, Carole L. Palmer, Melissa H.
Tom Garnett April 12, 2007 Smithsonian Institution Libraries National Museum of Natural History Board Science Committee Meeting Biodiversity Heritage Library.
Pacific Ecoinformatics and Computational Ecology Lab
UMBC an Honors University in Maryland 1 Adding Semantics to Social Websites for Citizen Science Pranam Kolari University of Maryland, Baltimore County.
Simple Ontologies and the Applications that Use Them Cyndy Parr, Joel Sachs, Tim Finin SPIRE (Semantic.
Research support was provided by NSF, award NSF-ITR-IIS , PI Tim Finin, UMBC. SPIRE Semantic Prototypes in Research Ecoinfomatics Approach We are.
The Agricultural Ontology Service (AOS) A Tool for Facilitating Access to Knowledge AGRIS/CARIS and Documentation Group Library and Documentation Systems.
Data Curation Education JCDL Pittsburgh, June 20, 2008 Linda C. Smith Melissa H. Cragin, Carole L. Palmer, W. John MacMullen, P. Bryan Heidorn.
GIASIPartnership Gateway: Invasive Alien Species Information Service Chris Lyal Natural History Museum, UK.
A Biodiversity Content Management System for Research, Education, and Outreach Cynthia Sims Parr University of Maryland, College Park Co-authors Roger.
NLPainter “Text Analysis for picture/movie generation” David Leoni Eduardo C á rdenas 12/01/2012.
TDWG 2006 Conference, St Louis Digitizing the legacy literature of biodiversity An introduction to the Biodiversity Heritage Library (BHL) Neil Thomson.
Funding Fish Biodiversity Research in Africa Hank Bart Tulane Museum of Natural History.
UMBC an Honors University in Maryland 1 Information Integration and the Semantic Web Finding knowledge, data and answers Tim Finin University of Maryland,
A Short Tutorial to Semantic Media Wiki (SMW) [[date:: July 21, 2009 ]] At [[part of:: Web Science Summer Research Week ]] By [[has speaker:: Jie Bao ]]
UMBC an Honors University in Maryland 1 Finding knowledge, data and answers on the Semantic Web Tim Finin University of Maryland, Baltimore County
Biocode Field Information Management System (FIMS) John Deck, UC Berkeley TDWG, 2014.
UMBC an Honors University in Maryland 1 Information Integration and the Semantic Web Finding knowledge, data and answers Tim Finin 1, Anupam Joshi 1, Li.
UMBC an Honors University in Maryland 1 Using the Semantic Web to Support Ecoinformatics Andriy Parafiynyk University of Maryland, Baltimore County
Predicting food web connectivity Phylogenetic scope, evidence thresholds, and intelligent agents Cynthia Sims Parr Ecological Society of America Memphis,
1 Technical Projects Workgroup Report to Plenary Ecoinformatics International Technical Collaboration April 10, 2008 Research Triangle Park, North Carolina,
John Maynard Woodworth and Today’s Commissioned Corps 2011 USPHS Scientific and Training Symposium John E. McElligott, MPH, CPH 1.
1 The National Biological Information Infrastructure and Biodiversity Collections Annette Olson BCI meeting, Washington DC, January 28-29th, 2008.
Jim Edwards Paddy Patterson Cyndy Parr CoML Synthesis meeting Long Beach, CA 1 February 2009.
Cynthia US Department of Agriculture National Agricultural Library 30 September 2015 Ag Data Commons Adding value to open agricultural research.
Taxonomic Workflow in the EDIT Platform for Cybertaxonomy Andreas Kohlbecker, Pepe Ciardelli, Niels Hoffmann, Katja Luther, Andreas Müller Botanic Garden.
Virtual Biodiversity ViBRANT Vocabularies, Standards, merging and linking Data Olaf Banki University of Amsterdam ViBRANT Virtual Biodiversity.
Lessons learned from Semantic Wiki Jie Bao and Li Ding June 19, 2008.
Removing Taxonomic Impediments: How the EOL and BHL Projects can help…. Graham Higley Natural History Museum, London At TDWG 2007.
NSF Cyber Trust Annual Principal Investigator Meeting September 2005 Newport Beach, California UMBC an Honors University in Maryland Trust and Security.
Wolf Siberski1 Semantic Web Framework Requirements Analysis (D 1.2.2) Wolf Siberski.
Publishing and Visualizing Large-Scale Semantically-enabled Earth Science Resources on the Web Benno Lee 1 Sumit Purohit 2
DELOS Network of Excellence on Digital Libraries Yannis Ioannidis University of Athens, Hellas Digital Libraries: Future Research Directions for a European.
Update on Ecoinformatics Technical Working Group Activities Larry Fitzwater Computer Scientist US Environmental Protection Agency Rome, Italy – 17 May.
Spire Semantic Prototypes In Ecoinformaics UMBC CS UMBC CS UMD MIND SWAP UMD MIND SWAP UMBC GEST UMBC GEST NASA GSFC NASA GSFC RMBL Peace RMBL Peace UC.
How To Conduct Scholarly ResearchJanuary 20, 2010 How To Conduct Scholarly Research January 20, 2010 RMCAD Rocky Mtn. College RMCAD of Art + Design.
Taxonomic Name Recognition (TNR) in Biodiversity Heritage Library (生物多样性图书馆分 类学名称识别) Qin Wei (魏琴), Chris Freeland, P. Bryan Heidorn Missouri Botanical.
The Agricultural Ontology Server (AOS) A Tool for Facilitating Access to Knowledge AGRIS/CARIS and Documentation Group Food and Agriculture Organization.
Biodiversity Heritage Library: A Successful Collaboration, A Fully Open Access Collection Marty Schlabach Mann Library, Cornell University Upstate New.
How Semantic Web Technologies are Enabling the Bench to Bedside Vision Susie Stephens Principal Product Manager, Life Sciences Oracle
Scientific Reproducibility using the Provenance for Healthcare and Clinical Research Framework Satya S. Sahoo Collaborators/Co-Authors: Joshua Valdez,
University of Michigan Museum of Zoology: Animal Diversity Web
Finding knowledge, data and answers on the Semantic Web
SWD = SWO + SWI SWD Rank SWD IR Engine
Analyzing and Securing Social Networks
ALA Conversation Starter
UMBC AN HONORS UNIVERSITY IN MARYLAND
Visit Swoogle web site at
Structure and Nonlinear Dynamics of
Designing an Infrastructure for Heterogeneity of Ecosystem
How To Conduct Scholarly Research January 20, 2010
Enabling Semantic Ecoblogging and Bioblitzes
OntoRank for RDF documents
Taxonomy of public services
Presentation transcript:

Who am I? Cyndy Parr Ontology Developer Skeptic (middleman & user?) Behavior Semantic Prototypes in Research Ecoinformatics

Why ontologies? SPIRE LepTree EOL “What are the body weights of mammalian predators of invasive fish?” Thought they might be useful ????

Tools SPIRE LepTree EOL Protégé & Swoop, hand-coding, Triple Shop, RDF Customized Drupal modules, Excel, Sesame triple store ????

Roadblocks SPIRE LepTree EOL Availability of other data Tool development, sociology Priorities

Vision SPIRE LepTree EOL Cross-walk glossaries, explore EvoDevo patterns Help others find & integrate data, quality checks?

Collaborators SPIRE LepTree UMBC: Tim Finin, Joel Sachs, Li Ding, UMCP: David Wang, RMBL: Neo Martinez, Rich Williams, Jennifer Dunne, UC Davis: Jim Quinn, Allan Hollander, Animal Diversity Web: Phil Myers, Roger Espinosa UMD: Charlie Mitter, Jerry Regier, Mike Cummings, John Park SI: Don Davis, John Brown, U Minn: Susan Weller

The Biodiversity Heritage Library The Field Museum of Natural History The Missouri Botanical Garden The Marine Biological Laboratory Harvard University The Smithsonian Institution EOL Cornerstone Institutions

NCBI