Polysaccharide A a widely distributed immunoregulatory microbial product Matthew Rhodes and Catherine Lozupone University of Colorado, Denver Rocky Mountain.

Slides:



Advertisements
Similar presentations
We Can Read About Mixing Colors
Advertisements

© red ©
December Rocky Mountain Bioinformatics Conference Speaker: Carl Bergenhem Co-Authors: Chih Lee, Chun-Hsi Huang Dept. of Computer Science and Engineering.
$100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300.
$100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300 $400 $500 $100 $200 $300.
Color Distribution A block BrownYellowOrangeRedGreenBlue GreenYellowOrangeRedPurple M&M Skittles.
Thank you to our Program Sponsors Rocky Mountain Chapter SWANA Annual Meeting Colorado Springs, Colorado September 11-12, 2003.
Scientific Notation. = 5.4 =3.47 Write the following in standard form A 1.8 X 10⁴ B 3.47 X 10⁷ C 4.3 X 10⁰ D 5.4 X 10⁻⁴ E 5 X 10⁻⁶ F (6 X 10⁴) (7 X 10⁵)
The Distributive Property Section 1.4. Distributive Property.
You have 10 seconds to name…
Visualizing Biosciences Genomics & Proteomics. “Scientists Complete Rough Draft of Human Genome” - New York Times, June 26, 2000 The problem: –3 billion.
Guess the colour Mix the colours Evaluation Group with work.
C o l o u r s Created by – Ganesh Satimeshram.
Functional Microbiomics: Gut Bacteria and the Immune System
COLORS.
Law Enforcement Sensitive
Medical Marijuana Dispensaries
Medical Marijuana Dispensaries
Butterfly Maths Each caterpillar must be coloured the correct pattern for it to turn into a butterfly. Work out each problem to know how to colour each.
Contact Graduate Program Director: More information at website:
Contact Graduate Program Director: More information at website:
Colors.
Follow Directions with Colors and Shapes
Election #1 Popular Vote Electoral Vote State Red Yellow
Name: _______________________________
Joseph C. Mudd, Jason M. Brenchley  Immunity 
Average Number of Photons
Unit 6 New school uniforms
Microbial community dissimilarity.
Population Genomics: Finding the Variants of Mass Disruption
Fig. 4 Bacterial taxonomic groups that discriminate among RYGB-, SHAM-, and WMS-derived samples. Bacterial taxonomic groups that discriminate among RYGB-,
6Y Wednesday Mapping of Early North American Societies
Can I color yellow?. Can I color yellow?
Genus-level genomic OTU (gOTU) richness.
Inferring chromatin organization.
Figure 2 Association between coronary artery disease polygenic risk score and the presence of migraine Results are given as odds ratios with 95% confidence.
Alterations in the Gut Microbiota Associated with HIV-1 Infection
What Color is it?.
Plots of the number of sequences [log (x + 1) scale] from bacterial OTUs in both PCR replicates (PCR1 and PCR2) of the 348 wild rodents analyzed in the.
The protein-protein interaction (PPI) network of four habitats, i. e
(A) Heat maps illustrate the percent abundances of the most abundant genera (all OTUs taxonomically classified to the same genus were collapsed into a.
Distribution of the bacterial taxa that exhibit the greatest log fold changes in mean relative abundance. Distribution of the bacterial taxa that exhibit.
CD160−/− mice have impaired clearance of oral L
Phylogenetic tree of genome-sequenced bacterial strains from the Populus microbiome. Phylogenetic tree of genome-sequenced bacterial strains from the Populus.
Bacteria significantly correlated with DE miRNAs.
ADAGE weights reflect a gene’s common regulatory and process features.
Understanding the Holobiont: How Microbial Metabolites Affect Human Health and Shape the Immune System  Thomas Siegmund Postler, Sankar Ghosh  Cell Metabolism 
Catherine M. Pound et al. Hospital Pediatrics 2017;7:
Without Adaptive Immunity, There’s a Cost to Responding STAT
Microbial Molecules from the Multitudes within Us
Volume 20, Issue 4, Pages (October 2016)
Microbial community structure analysis.
STEAM Survey.
Denver Chapter Payroll Association
LEARNING STRATEGIES: TRUE COLOURS The True Colours Test.
How Do Mesenchymal Stromal Cells Suppress T Cells?
LEARNING STRATEGIES: TRUE COLOURS The True Colours Test.
Fig. 1 Upward emission functions used to compute the maps.
Distribution of ARGs in RefSoil genomes and plasmids.
Transcription/abundance ratios (logarithmic scale) of OTUs, ZOTUs, and population genomes of selected microbial orders. Transcription/abundance ratios.
Heatmap showing Spearman’s rho values for significant correlations between weed abundances and bacterial classes (i.e., OTU data pooled at the class level;
Let’s Learn the Basic Colors
Bacterial composition of olive fermentations is affected by microbial inoculation. Bacterial composition of olive fermentations is affected by microbial.
Enrichment of KEGG pathways in microbial genes in different samples.
2018-post QI implementation; door-to-groin puncture time (red), door-to-door time (ER to endovascular lab (blue), national goal for DTG time (green) post.
PCoA plots of subgingival samples with disease classification overlaid
Fig. 2 The outcome of plant-pathogen interaction is associated with the initial soil microbiome composition and functioning. The outcome of plant-pathogen.
Variations in beta and alpha diversity of gut microbiome bacterial communities in relation to presence of Blastocystis. Variations in beta and alpha diversity.
Live/Dead-stained fluorescence microscopy images of in vitro PEG tube surface biofilms grown in chemostats at pH 6.0 (A), pH 5.0 (B), pH 4.0 (C), and pH.
Fig. 1. Maps of Lesotho, a landlocked country within South Africa.
Presentation transcript:

Polysaccharide A a widely distributed immunoregulatory microbial product Matthew Rhodes and Catherine Lozupone University of Colorado, Denver Rocky Mountain Bioinformatics Conference December 11 th 2014 Mazmanian and Kasper 2006

Mazmanian 2009 The Microbial Health Factor (PSA) One bacterial molecule sufficient to mediate healthy immune response!!! BADGOOD PSA

The B. fragilis PSA Operon Coyne et al E-Value Hits to wcfR Next best hit in B. fragilis (PSB)

IL-10 Production Amongst PSA Producers Red: PSA Black:No-PSA Neff unpublished

PSA and HIV

Erysipelotrichales and HIV OTUs Red: Genome without PSA Orange: OTU up with HIV Green: Genome with PSA Blue: OTU down with HIV Thank You!!! Lozupone Lab Palmer Lab Sarkis Mazmanian and other Collaborators Computational Bioscience for Funding