Cells have 500-1000 different lipids; Why? How? Lipidomics 30% of the cellular proteins are membrane proteins Proteomics How do cells use proteins and.

Slides:



Advertisements
Similar presentations
2.4: MEMBRANES.
Advertisements

Chapter 4 Cell Structure.
Lipids Highly diverse structures Unifying property
Lipids Introduction and classification
© 2011 Pearson Education, Inc. Key Concepts Plasma membranes are made up of selectively permeable bilayers of phospholipids. Phospholipids are amphipathic.
The Structure of the Cell Membrane
Chapter 5: Biological Membranes
Membrane Transport.
Biochemistry Sixth Edition
Physiology -I PHL 215 PHL 215 Dr/ Gamal Gabr Pharmacy College Pharmacy College 1.
Chapter 8 RQ What is the term for how the cell membrane “chooses” what enters and leaves the cell? What kind of microscopes are used to study the cell.
Cell Membrane.
Announcements, Feb. 9 Reading for today: on membrane lipids. Reading for Monday: on membrane proteins. Reading for Wednesday: on.
Javad Jamshidi Fasa University of Medical Sciences Biomembrane Structure & Function.
Lecture 4 Cellular Building Blocks: Lipids and Membranes.
Biological Membranes 薛雅薇 中央大學物理系. Cell Membrane Two primary building blocks : - Protein - Lipid, or fat. Lipids form a bilayer. The glycocalyx carbohydrate.
Review For Final I. Should I take the final? Can’t hurt you Calculate your average and determine what you need to change your grade.
Biology 107 Cellular Membranes September 22, 2003.
Lecture 11 Vesicular Trafficking: Lysosomes;
1 Segregation of sphingolipids and sterols during formation of secretory vesicles at the trans-Golgi network Kai Simons group, 2009, J. Cell Biology Deniz.
Plasma Membrane – aka cell membrane
1. Membrane Organization and the Plasma Membrane 1a. The lipid bilayer.
Plasma Membrane.
BIO 224 Introduction to Molecular and Cell Biology
Plasma Membrane. Plasma Membrane (AKA Cell Membrane) What is the plasma membrane? What does it do? What is its composition?
Chapter Glycerophospholipids
Lipids: Chapter 10 Major characteristic: hydrophobicity (water insolubility) –But typically amphipathic Lipophilic (hydrophobic) chain Polar/charged (hydrophilic)
Effects of Cholesterol on Membranes: Physical Properties Removes gel to liquid crystal phase transition New “intermediate” phase called liquid ordered.
Ps ns ss ms nm mm mm Ab-initio methods Statistical and continuum methods Atomistic methods.
Cells & Membranes Prokaryotic vs. Eukaryotic Cells Why would it benefit a cell have to membrane-bound organelles? –Different “compartments” for specific.
Topic 2: Cells Topic 2: Cells 2.4 Membranes blog.lib.umn.edu.
Cell Membranes BIO 224 Introduction to Molecular and Cell Biology.
Molecular Cell Biology Fifth Edition Chapter 5: Biomembranes and Cell Architecture Copyright © 2004 by W. H. Freeman & Company Harvey Lodish Arnold Berk.
Glycerophospholipids
Membrane Structure & Function
BC368 Biochemistry of the Cell II
Membrane Structure & Function BSCI 420,421Lecture 14Oct 2002 Ghandi’s eyes looked out to sea. “When I was a boy, I used to sing a song in the temple: A.
Glycerophospholipids Glycerol PO 4 Amino alcohol Fatty acid.
Basic Biochemistry: Lipid Structure Dr. Kamal D. Mehta Department of Molecular & Cellular Biochemistry Wexner Medical Center at the Ohio State University.
Plasma membrane structure ط Fluid mosaic model of plasma membrane, ط chemical composition ط Fluidity of cell membrane D
Plasma Membrane. Pre-Assessment 1.Which of the following statements concerning membrane proteins is incorrect? A.They can act as a channel, allowing the.
By: Halie Derr Nick Splitt
Chapter 9 - Lipids and Membranes Lipids are essential components of all living organisms Lipids are water insoluble organic compounds They are hydrophobic.
THE CELL MEMBRANE The Key to Cellular Transport. Some Membrane Terms  Many substances can diffuse across biological membranes, but some are too large.
Javad Jamshidi Fasa University of Medical Sciences, October 2015 The Biomembrane Structure & Function.
Lipids A lipid is any molecule that DOES NOT mix with water. – They are “water fearing” / nonpolar (hydrophobic) Lipids function in: – Energy (E) storage.
The Plasmamembrane and Lipid Rafts 08/2007 Lecture by Dr. Dirk Lang Dept. of Human Biology UCT Medical School Room Phone:
MOVEMENT THROUGH THE MEMBRANE How do materials or substances enter or leave cells?
Membranes. Introduction Properties attributed to living organisms (movement, growth etc) depend on membranes All membranes – same general structure (lipid.
Chapter 4 – Membrane Structure & Function
BIOLOGY 11 IB 2.4: MEMBRANES. ASSESSMENT STATEMENTS 2.4.1Draw and label a diagram to show the structure of a membrane 2.4.2Explain how the hydrophobic.
Chapter 7 Review Membrane Structure and Function.
Movement Through the Membrane Mr. Luis A. Velázquez Biology.
THE CELL MEMBRANE The Key to Cellular Transport. Characteristics of the Cell Membrane  Made of phospholipids – arranged in two layers called a bilayer.
Cell Membrane Thin layer of lipid and proteins Separates the cell’s contents from the environment Phospholipid bilayer Two layers of lipid (made from.
Cells Unit Objective B-Cell membrane and transport Cell membranes are selectively permeable due to their structure. –Cell membranes separate the internal.
Cell Transport Crossing the Plasma Membrane. Plasma Membrane Phospholipid bilayer with proteins and cholesterol molecules scattered throughout Selectively.
Lipids. Lipids are non-polar (hydrophobic) compounds, soluble in organic solvents. 1. Simple lipids: esters of FA with alcohols Fats: alcohol = glycerol.
And Molecular Movement Across Them
By/ Dr. Magda Ibrahim Lecturer of Medical Biochemisrty
Cell Membrane/Plasma Membrane Structure
The structure of biological membranes makes them fluid and dynamic.
Biological Membranes Sections
Ronald P.J. Oude Elferink, Coen C. Paulusma, Albert K. Groen 
Key Concepts Plasma membranes are made up of selectively permeable bilayers of phospholipids. Phospholipids are amphipathic lipid molecules – they have.
Catherine L. Jackson, Laurence Walch, Jean-Marc Verbavatz 
Lipids Dr. Tarek Zaida.
Cell Transport Worksheet
4. The basics of lipids and membrane structure
Cell Membrane Structure
Presentation transcript:

Cells have different lipids; Why? How? Lipidomics 30% of the cellular proteins are membrane proteins Proteomics How do cells use proteins and lipids for their vital functions? Systems Biology In many cases there must be an interplay between the lipids and the proteins! They co-evolved in evolution. Cholesterol trafficking machinery Gerrit van Meer; Membrane Enzymology Bijvoet Center / Institute of Biomembranes

P G OH Glycerolipids Sterols sphingomyelin glycosphingolipids glycerophospholipids PC, PE, PS, PI OH N O O O O O O O Sphingolipids 65 mol% 10% 25% glycerol sphingosinecholesterol fattyacid fattyacid glucose oleicacid

A P G OH GlycerolipidsGlycerolipidsSterolsSterols SphingomyelinGlycosphingolipids PC, PE, PS, PI Cholesterol OH OH O O OH O O SphingolipidsSphingolipids 65 mol% 10% 25% A P O O O O O A P O O O O O N N P = phosphate A = choline, ethanolamine, serine, inositol G = glucose

The hydrophobic effect Nonpolar molecules break the organization of the water; caged water Aggregation increases the entropy of the water more than the decrease in entropy of the nonpolar molecule Lipid molecules will not dissolve in water

Membranes consisting of unsaturated phospholipids are in the liquid phase; fluid Cholesterol reduces fluidity Membranes consisting of saturated phospholipids are in the gel phase; solid Cholesterol fluidizes A second fluid state exists Solid-fluid immiscibility Fluid-fluid immiscibility Fluidity does not increase linearly with cholesterol content: “phase transitions”

lo ld + lo Cholesterol ld ld + lo + so ld + so POPCPSM OH C P N O O C P O O O O O Phase diagram of the ternary mixture palmitoyl-oleoyl phosphatidylcholine, palmitoyl sphingomyelin, cholesterol de Almeida et al. (2003) Biophys. J. 85, 2406 lo + so so Follow any line from the bottom (chol = 0) to the top (chol = 100) and you cross phase boundaries: Phase transitions.

Proteins are sorted by lateral segregation into different coated pits This must also occur for lipids. How does a certain lipid composition recoggnize and capture a certain SNARE required for targeting?

Segregation of transferrin Tfn (recycling) and epidermal growth factor EGF (to late endosomes) after endocytosis Sharma et al (2003) JBC 278, 7564

Concentration of fluorescent (Bodipy-) glycosphingolipid LacCer in endosome subdomains (green: low concentration; red high concentration) Sharma et al (2003) JBC 278, 7564 Endocytosis Removal of Bodipy-LacCer from surface Insertion of Bodipy LacCer on surface

Lipids spontaneously aggregated during endocytosis This must have involved lateral segregation Does this only occur during endocytotic recycling?

PS PS PE PE SM SM PC PC GlcCer PE PE cholesterol cholesterol Plasma membrane ER Golgi Cellular membranes differ in lipid composition: because ER and plasma membrane are connected by vesicular transport in both directions sorting must take place

ER G TGNE L Sphingolipids and cholesterol Unsaturated PC P O O O O O C OH P O O N C Lipid sorting must occur at the Golgi Lipid raft microscopy: Eggeling, C., Ringemann, C., Medda, R., Schwarzmann, G., Sandhoff, K., Polyakova, S., Belov, V.N., Hein, B., von Middendorff, C., Schonle, A., et al Direct observation of the nanoscale dynamics of membrane lipids in a living cell. Nature 457:

P 20 nm HDL Apo-A1 The lipoprotein LDL Phospholipid Triacylglycerol Cholesterol ester

DAGCerCholLPCPCganglioside s seconds 10 h >10 h Lipid structure predicts flip rate in model membrane

DAGCerLPCPCganglioside Bodipy 10 2 h 10 min 10 min Native 60 h < 10 2 s 10 3 h Lipid structure predicts “off rate” in model membrane Cholesterol < 2 hours

Outside Cytosol Lumen cholesterol glucosylceramide cholesterol glucosylceramide 1.Lateral mobility ++ 2.Vesicular traffic Flip-flop +– 4.Monomolecular transfer +– Transport mechanisms of lipids

Cholesterol moves rapidly across membranes Cholesterol moves rapidly between membranes Thus its localization must be determined by affinity for other lipids or proteins

Cholesterol binds to specific proteins Thiele et al. (2000) Nature Cell Biol 2, 42-49

Interactions of proteins with membranes

Cholesterol has an increased affinity for some types of lipids (saturated glycerophospholipids and sphingolipids), and for some sorts of proteins. The high affinity of cholesterol for a certain protein may make this a raft protein just like the effect of palmitoylation Still, cholesterol moves quickly between and across membranes. What is the problem? Well there are a number of cholesterol transport diseases that are caused by mutations in what may be cholesterol transport proteins. What do they do?

ER G L E N ABCA1 ABCG5/G8 NPC1L1 NPC1NPC2MLN64StAR M SCP Proteins of cholesterol transport