Network Queuing System (NQS). Controls batch queues Only on Cray SV1 Presently 8 queues available for general use and one queue for the Cray analyst.

Slides:



Advertisements
Similar presentations
June 1, 1999Foreground/Background Processing1 Introduction to UNIX H. Foreground/Background Processing.
Advertisements

Operating Systems Operating system is the “executive manager” of all hardware and software.
ActiveXperts Network Monitor Monitors servers, workstations and devices for availability Alerts and corrects.
ActiveXperts Network Monitor Monitors servers, workstations and devices for availability Alerts and corrects.
Using tcpdump. tcpdump is a powerful tool that allows us to sniff network packets and make some statistical analysis out of those dumps. tcpdump operates.
Job Submission Using PBSPro and Globus Job Commands.
Koç University High Performance Computing Labs Hattusas & Gordion.
Network for Computational Nanotechnology (NCN) Purdue, Norfolk State, Northwestern, UC Berkeley, Univ. of Illinois, UTEP Basic Portable Batch System (PBS)
CSCI 330 T HE UNIX S YSTEM Shell Job Control. T ODAY ’ S CLASS Unix is multi-user, multi-process OS Shell features to control jobs Unix utilities to manage.
Lesson 10-Controlling User Processes. Overview Managing and processing processes. Managing jobs. Exiting/quitting when jobs have been stopped.
Southgreen HPC system Concepts Cluster : compute farm i.e. a collection of compute servers that can be shared and accessed through a single “portal”
Software Tools Using PBS. Software tools Portland compilers pgf77 pgf90 pghpf pgcc pgCC Portland debugger GNU compilers g77 gcc Intel ifort icc.
Using Clusters -User Perspective. Pre-cluster scenario So many different computers: prithvi, apah, tejas, vayu, akash, agni, aatish, falaq, narad, qasid.
Running Jobs on Jacquard An overview of interactive and batch computing, with comparsions to Seaborg David Turner NUG Meeting 3 Oct 2005.
ISG We build general capability Job Submission on the Olympus Cluster J. DePasse; S. Brown, PhD; T. Maiden Pittsburgh Supercomputing Center Public Health.
DCC/FCUP Grid Computing 1 Resource Management Systems.
Internet Applications: Telnet, Ping and Traceroute.
Sun Grid Engine Grid Computing Assignment – Fall 2005 James Ruff Senior Department of Mathematics and Computer Science Western Carolina University.
CS 497C – Introduction to UNIX Lecture 27: - The Process Chin-Chih Chang
Asynchronous Solution Appendix Eleven. Training Manual Asynchronous Solution August 26, 2005 Inventory # A11-2 Chapter Overview In this chapter,
UNIX chapter 03 Getting Started Mr. Mohammad Smirat.
Lecture 8 Configuring a Printer-using Magic Filter Introduction to IP Addressing.
ISG We build general capability Purpose After this tutorial, you should: Be comfortable submitting work to the batch queuing system of olympus and be familiar.
Critical Flags, Variables, and Other Important ALCF Minutiae Jini Ramprakash Technical Support Specialist Argonne Leadership Computing Facility.
 Accessing the NCCS Systems  Setting your Initial System Environment  Moving Data onto the NCCS Systems  Storing Data on the NCCS Systems  Running.
Track 1: Cluster and Grid Computing NBCR Summer Institute Session 2.2: Cluster and Grid Computing: Case studies Condor introduction August 9, 2006 Nadya.
Operating Systems.  Operating System Support Operating System Support  OS As User/Computer Interface OS As User/Computer Interface  OS As Resource.
Sun Grid Engine. Grids Grids are collections of resources made available to customers. Compute grids make cycles available to customers from an access.
ISG We build general capability Introduction to Olympus Shawn T. Brown, PhD ISG MISSION 2.0 Lead Director of Public Health Applications Pittsburgh Supercomputing.
Mastering the AS/400, Third Edition, author Jerry Fottral 1 Week 2 The System The AS/400 is a multi-user, multi-tasking system -- a system on which many.
BIOSTAT LINUX CLUSTER By Helen Wang October 11, 2012.
VIPBG LINUX CLUSTER By Helen Wang March 29th, 2013.
Using The Cluster. What We’ll Be Doing Add users Run Linpack Compile code Compute Node Management.
Bigben Pittsburgh Supercomputing Center J. Ray Scott
McGraw-Hill©The McGraw-Hill Companies, Inc., 2000 Chapter 19 TELNET and Rlogin.
17-April-2007 High Performance Computing Basics April 17, 2007 Dr. David J. Haglin.
Chapter 9 Networking Graham Glass and King Ables, UNIX for Programmers and Users, Third Edition, Pearson Prentice Hall, Original Notes by Raj Sunderraman.
Additional UNIX Commands. 222 Lecture Overview  Multiple commands and job control  More useful UNIX utilities.
Chapter Eight Exploring the UNIX Utilities. 2 Lesson A Using the UNIX Utilities.
UNIX Commands. Why UNIX Commands Are Noninteractive Command may take input from the output of another command (filters). May be scheduled to run at specific.
SNS Integrated Control System A process manager for soft IOCS DH Thompson.
Parallel Programming on the SGI Origin2000 With thanks to Igor Zacharov / Benoit Marchand, SGI Taub Computer Center Technion Moshe Goldberg,
HPC for Statistics Grad Students. A Cluster Not just a bunch of computers Linked CPUs managed by queuing software – Cluster – Node – CPU.
Beowulf Software. Monitoring and Administration Beowulf Watch 
Review of Condor,SGE,LSF,PBS
Process Architecture Process Architecture - A portion of a program that can run independently of and concurrently with other portions of the program. Some.
Faucets Queuing System Presented by, Sameer Kumar.
Software Tools Using PBS. Software tools Portland compilers pgf77 pgf90 pghpf pgcc pgCC Portland debugger GNU compilers g77 gcc Intel ifort icc.
Cluster Computing Applications for Bioinformatics Thurs., Sept. 20, 2007 process management shell scripting Sun Grid Engine running parallel programs.
Running Parallel Jobs Cray XE6 Workshop February 7, 2011 David Turner NERSC User Services Group.
ISG We build general capability Introduction to Olympus Shawn T. Brown, PhD ISG MISSION 2.0 Lead Director of Public Health Applications Pittsburgh Supercomputing.
Submitting Jobs to the Sun Grid Engine at Sheffield and Leeds (Node1)
Korea Workshop May GAE CMS Analysis (Example) Michael Thomas (on behalf of the GAE group)
Portable Batch System – Definition and 3 Primary Roles Definition: PBS is a distributed workload management system. It handles the management and monitoring.
CSC414 “Introduction to UNIX/ Linux” Lecture 3
Agenda Managing Processes (Jobs) Command Grouping Running jobs in background (bg) Bringing jobs to foreground (fg), Background job status (jobs) Suspending.
Advanced topics Cluster Training Center for Simulation and Modeling September 4, 2015.
Wouter Verkerke, NIKHEF 1 Using ‘stoomboot’ for NIKHEF-ATLAS batch computing What is ‘stoomboot’ – Hardware –16 machines, each 2x quad-core Pentium = 128.
Geant4 GRID production Sangwan Kim, Vu Trong Hieu, AD At KISTI.
Using ROSSMANN to Run GOSET Studies Omar Laldin ( using materials from Jonathan Crider, Harish Suryanarayana ) Feb. 3, 2014.
Grid Computing: An Overview and Tutorial Kenny Daily BIT Presentation 22/09/2016.
An Brief Introduction Charlie Taylor Associate Director, Research Computing UF Research Computing.
PARADOX Cluster job management
Unix Scripts and PBS on BioU
OpenPBS – Distributed Workload Management System
CommLab PC Cluster (Ubuntu OS version)
Compiling and Job Submission
Quick Tutorial on MPICH for NIC-Cluster
Working in The IITJ HPC System
Presentation transcript:

Network Queuing System (NQS)

Controls batch queues Only on Cray SV1 Presently 8 queues available for general use and one queue for the Cray analyst. Queue sizes range from 16MW-512MW and CPU seconds. On Cray systems 8 bytes = 1 word

Accessing NQS Log on to the Cray SV1 thru telnet or rlogin Use the rsh command at a UNIX workstation

NQS allows the user to Execute jobs in batch mode Continue to use the terminal/workstation while batch jobs execute Execute jobs whether or not interactive session remains active Specify job limits Monitor an NQS job’s progress Allows checkpointing and restarts

Submitting Jobs to NQS The qsub command submits jobs to the NQS system for batch execution. qsub can take input from the terminal or from a file. This would submit a job to the default queue: cray% qsub cd f90 myfile.f./a.out > my.out CTRL/D

Resource limits can be defined either on the qsub command line or within the script file that is submitted to NQS. These limits are then used by NQS to determine which batch queue will be used for your job.

For example the per-request CPU limit can be set either by: qsub -lT 1000 batchfile or from within the script “batchfile” by: # QSUB -lT 1000

Checking Job Status The qstat command can be used to display the status of requests in NQS queues and the current state of NQS queues. qstat -a qstat -b

The qdel command can be used to cancel a queued job or to send a signal that kills an executing job. qdel 9678 qdel