Thoughts on Algorthmic Approaches to Reveal Marine Geomorphology as a Proxy for Habitat Presentation IT13B-01 2010 Ocean Sciences Meeting Portland, OR.

Slides:



Advertisements
Similar presentations
INDUSTRIAL ECONOMICS, INCORPORATED Oregon Coastal Atlas Coastal web atlases are among the best sources of GIS data for marine spatial planning Primary.
Advertisements

Tasks and selected results of the project „Ecosystem approach to marine spatial planning – Polish marine areas and the Natura 2000 network” Department.
Shale Island Exploration of Shale Island. Shale Island Shale Island is but a small outcrop of shale located in southern Monterey Bay, California in a.
UNEP Coral Reef Unit Division of Environmental Conventions c/o UNEP-World Conservation Monitoring Centre Monitoring of coral reefs.
Coral Reef Habitat Monitoring Ecosystem based management requires multifaceted monitoring Habitat = benthos + water column Coral reef ecosystems ≈ 0 –
Characterization of Mesophotic Coral Reefs Using the Seabed AUV Roy A. Armstrong 1 and Hanumant Singh 2 1 Bio-optical Oceanography Laboratory, Deapartment.
American Samoa Benthic Terrain Viewer Emily M. Larkin and Dawn Wright Dept. of Geosciences, Oregon State University September, 2004 (Larkin 2001)
MESH webGIS Habitat maps online at
Bioinformatics GIS Applications Anatoly Petrov.
MARS 120 Lab Lab 1 – Geography of the oceans, Contouring, and Bathymetery Objectives: 1. To become familiar with the topography of the seafloor, and differences.
Infrastructure for Data Sharing, Spatial Analysis, Resource Decision- Making and Societal Impact The Oregon Coastal Atlas ITR/IM Digital Govt. Grant EIA
Bathymetry Lab Adam Fox Coastal Carolina University.
John Lowry RS/GIS Laboratory College of Natural Resources Utah State University Resource Management Tools & Geospatial Conference, Phoenix, AZ April 18-22,
Dawn Wright and Davey Jones Locker Lab Group Department of Geosciences Oregon State University OSU GIS & Seafloor Mapping Activities in American Samoa.
Dawn Wright and Emily Larkin Davey Jones Locker Lab Department of Geosciences Oregon State University, USA GIS Benthic Terrain Workshop.
GIS Analysis Models GIS Analysis Model Graphical modeling framework tied to actual GIS functions Functions, Data, Numerical Models, Tools, etc.
GEO/OC 103 Exploring the Deep …. Today’s Tune “ Sink to the Bottom” Fountains of Wayne.
Tips and Tricks for Using GIS in the Classroom Teaching with New Geoscience Tools Visualizations, Models, and Online Data Feb 10-12, 2008 University of.
Multibeam Bathymetric and Backscatter Products for Benthic Habitat Mapping There’s No Silver Bullet Joyce Miller Pacific Islands Fisheries Science Center.
Terrain Analysis Slope ( Landslide susceptibility) Aspect ( Solar insolation, vegetation) Catchment or dispersal area ( Runoff volume, soil drainage) Flow.
Wet DEMs – Lessons Learned Working with Bathymetric Data in the Hawaiian Islands Emily Lundblad NOAA Pacific Islands Fisheries Science Center Coral Reef.
NOAA’s Ocean and Coastal Mapping Challenges National Ocean and Coastal Mapping Strategic Action Plan Workshop February 2008.
Dept. of Geosciences – Oregon State University Ron Rinehart Dr. Dawn Wright Emily Lundblad Emily Larkin NOAA - Coastal Services Center Josh Murphy Lori.
U.S. Department of the Interior U.S. Geological Survey The Development of a National Hydrography Dataset for Semantic Geospatial Science Integration Dalia.
Specialty Group Sponsors: Coastal and Marine Geography Geographic Information Science and Systems Marine/Coastal GIS and Acoustic Remote Sensing AAG Annual.
Pål Buhl-Mortensen Institute of Marine Research Atlantic Seabed Mapping – Status & Direction Towards a CAN-EU-US Atlantic strategic seabed mapping pilot.
A Strategic Analysis for identifying MPA’s : - Towards a Marine Spatial Planning Method for the French MPA Agency CAML Workshop Villefranche s/mer 18th.
NOAA/UNH Joint Hydrographic Center Education and Research at the University of New Hampshire
GIS data sources Data capture and compilation is very time consuming and costly Up to 80% cost of a GIS (Longley et al.) Primary Data – data captured specifically.
U.S. Department of the Interior U.S. Geological Survey Multispectral Remote Sensing of Benthic Environments Christopher Moses, Ph.D. Jacobs Technology.
Scientific Consensus and Action Plan for Mapping the Oregon Territorial Seafloor Dawn Wright, Chris Goldfinger, OSU and the Oregon Territorial Sea Task.
Future Research at the Toolik Field Station Perspectives from Breck Bowden Science Support Visioning Workshop Portland, Oregon 2-4 August 2012.
NWS Partners Meeting 2010 Dave Westerholm, Director National Oceanic and Atmospheric Administration’s Office of Response and Restoration June 9, 2010.
J. Cho Department of Integrated Environmental Science Bethune-Cookman University Daytona Beach, FL.
Educational Module #2: Benthic Terrain Classification Emily M. Larkin and Dawn Wright Dept. of Geosciences, Oregon State University September, 2004 (Larkin.
Lesson 23: Technology II. Strides in underwater research Did you know that most of the ocean (>95%) still hasn’t been explored? Technologies developed.
1 Global Systems Division (GSD) Earth System Research Laboratory (ESRL) NextGen Weather Data Cube Chris MacDermaid October, 2010.
Arc Marine Data Model Exercise Exercise and data at dusk.geo.orst.edu/djl/arcgis/ArcMarine_Tutorial/ What to turn in: –Screen snapshot of what your ArcMap.
David Connor, JNCC, UK HELCOM Red List habitat workshop, March 2010, Stockholm.
Kyle Hogrefe continued
The Geomorphology, Habitats, and Mapping of the Hawaiian Archipelago Joyce Miller and John Rooney NOAA Pacific Islands Fisheries Science Center Coral Reef.
Scientific Consensus Statement for Mapping the Oregon Territorial Seafloor Dawn Wright, Chris Goldfinger, OSU and the Oregon Territorial Sea Task Force.
Coastal and Marine Ecological Classification Standard (CMECS) FGDC Standards Working Group July 7, 2010.
Assessing Linkages between Nearshore Habitat and Estuarine Fish Communities in the Chesapeake Bay Donna Marie Bilkovic*, Carl H. Hershner, Kirk J. Havens,
ESRI Ocean Data Model Working Group, Oct. 4-5, 2001 Dawn Wright Oregon State U. Additional Ideas for the ArcGIS Ocean Data Model.
Ocean.US and Coastal Ocean Applications and Science Team (COAST) Larry Atkinson September 2004 Corvallis.
European Topic Centre on Biological Diversity Douglas Evans European Topic Centre on Biological Diversity The EUNIS habitats classification - a short history.
Labs Start Next Week Don’t forget your lab book!!!  Read through labs ahead of time  Exploring the Deep: GEO/OC 103 Lab Manual by Hall-Wallace et al.
Workshop on Global Bathymetry for Oceanography, Geophysics, and Climatology24-26 October 2002 MARGINS Interests in Improved Resolution Altimetry Derived.
Infrastructure for Data Sharing, Spatial Analysis, Resource Decision- Making and Societal Impact The Oregon Coastal Atlas NSF ITR/IM Digital Govt. Grant.
What standards are reasonable for CRCP mapping needs?
NOAA Coastal Services Center Providing state and local organizations with the skills, tools, and data needed to manage the nation’s coastal resources and.
EMODNET Physical Habitat Portal How to proceed? by MODEG (9 th June 2011) Discussion group: David O’Connor, Joni Kaitaranta, Andy Cameron, Jacques Populus,
Spatial Reasoning for “Terra Incognita” Challenges and Progress of Coastal/Marine GIS Dawn Wright Department of Geosciences Oregon State University.
Coastal Marine Ecological Classification Standard (CMECS) and the Ecosystem Thematic Network (ETN) Christopher J. Madden NatureServe March 2008.
Toward a Coastal Marine Ecological Classification Standard March 27, 2007 Christopher J. Madden NatureServe.
Hydrographic Services Review Panel October 2010 David Fox Oregon Department of Fish & Wildlife Marine Resources Program Use of seafloor mapping data in.
Great Lakes Environmental Research Laboratory Review – Ann Arbor, MI November 15-18, 2010 Page 1 Observing Systems & Advanced Technology Steve Ruberg.
AAG - April 8th D BENTHIC TERRAIN MAPPING AND MODELING IN AMERICAN SAMOA Ronald W Rinehart Oregon State University Dr. Dawn.
Natalie Coltman, JNCC, UK Progress meeting: 25 May 2010, Copenhagen.
Ur-EMODnet progress meeting EUSeaMap Preparatory Action for development & assessment of a European broad-scale seabed habitat map Brussels, 7 th June 2011.
GULF OF MAINE MAPPING INITIATIVE: A FRAMEWORK FOR REGIONAL FISHERIES RESEARCH AND MANAGEMENT Sara Ellis 1, Thomas Noji 2, Susan Snow-Cotter 3, Brian Todd.
Oceanic Monitoring and Sampling Phoebe Woodworth-Jefcoats Ecosystems and Oceanography Program Ecosystem Sciences Division PIFSC 5 April 2016.
Illustrating NOAA’s Geospatial Role in Resilient Coastal Zones Joseph Klimavicz, NOAA CIO and Director of High Performance Computing and Communications.
Plan of Action (II)‏. 4.- Research lines (R+D+i)‏ Remote Sensing Marine Biosciences Marine geosciences Technological Developing Engineering.
Schedule - Day 1, Mon 8:30-9:30 - Dawn - Intro
EUSeaMap 2 (EMODnet Habitats) A physical habitat map for European Seas
OC3030 Oceanographic Computing and Data Display
Development of a methodological framework (EEA contributions)
Marine Environment and Water Industry
Presentation transcript:

Thoughts on Algorthmic Approaches to Reveal Marine Geomorphology as a Proxy for Habitat Presentation IT13B Ocean Sciences Meeting Portland, OR Presentation IT13B Ocean Sciences Meeting Portland, OR Dawn Wright Dept. of Geosciences, Oregon State University Will Heyman Department of Geography, Texas A&M University Dawn Wright Dept. of Geosciences, Oregon State University Will Heyman Department of Geography, Texas A&M University

Primary Data Acquisition: Visual Hawaii Undersea Research Lab NOAA CRED

Primary Data Acquisition: “Shallow” Multibeam sonar, 200 m and shallower Ikonos, shoreline to 15 m Portable, pole-mounted EM3000 Ikonos satellite (Image from SatMagazine) R/V Acoustic Habitat Investigator w/ RESON 8101, NOAA

Primary Data Acquisition: “Deep” Multibeam sonar, regional scale, 200 m and deeper Image from Lost City Expedition (2003)

Algorithmic Approaches Almost always quantitative, usually automatic or semi-automatic… Allow the user to refine the classification at certain stages in the process based on visual observation… Subject to artifacts, but more repeatable, less expensive, and with resolution limited only by the source data…

Algorithmic Approaches What are the major tried and true algorithmic approaches for producing classifications? What should be the habitat classification categories? …for a particular region (shallow vs. deep) … sensor (satellite, acoustics at different resolutions and in the subsurface)? Is it feasible to move toward a standardization of algorithmic seafloor classification approaches?

Broad scale Fine scale Shape: Bathymetric Position Index (from TPI, Jones et al., 2000; Weiss, 2001; Iampietro & Kvitek, 2002)

Emily Lundblad, OSU Thesis Zone and Structure Flow Chart

Structure Classification Decision Tree Emily Lundblad, OrSt M.S. Thesis

Benthic Terrain Modeler

Ecosystem-Based Mgmt Tools Network Ecosystem-Based Mgmt Tools Network

Roughness: Rugosity Measure of how rough or bumpy a surface is, how convoluted and complex Ratio of surface area to planar area Graphics courtesy of Jeff Jenness, Jenness Enterprises, and Pat Iampietro, CSU-MB Surface area based on elevations of 8 neighbors 3D view of grid on the leftCenter pts of 9 cells connected To make 8 triangles Portions of 8 triangles overlapping center cell used for surface area

Benthic Complexity Ardron and Wallace, in Wright and Scholz, Place Matters: Geospatial Tools for Marine Science… 2005

Benthic Complexity Ardron and Wallace, in Wright and Scholz, Place Matters: Geospatial Tools for Marine Science… 2005

Ecological Habitat Modeling GLM, GAM, classification/regression trees, etc. Ecological Habitat Modeling GLM, GAM, classification/regression trees, etc. Iampietro, Kvitek et al., Marine Geodesy, 2008

Bayesian Approaches Simons and Snellen, Applied Acoustics, 2009

Classification Schemes: CMECS Coastal and Marine Ecological Classification Standard Classification Schemes: CMECS Coastal and Marine Ecological Classification Standard Madden et al., NatureServe, NOAA

EUNIS eunis.eea.europa.net EUNIS eunis.eea.europa.net EEA/European Environmental Information Observation Network

EUSeaMap EUNIS classification is a common language for habitat. Propose modifications to EUNIS where appropriate (Baltic or Med) EUSeaMap EUNIS classification is a common language for habitat. Propose modifications to EUNIS where appropriate (Baltic or Med) Natalie Coltman, JNCC, UK,

EUSeaMap Methodology Natalie Coltman, JNCC, UK, Habitat Biological zone depth, light, disturbanceEnergytides, wavesSubstratesediment, rock High energy circalittoral rock Circalittoral zone High energyRock O2/POC/C hl Ice cover

Geoscience Australia Heap, Nichol et al., AAG, 2008

geohab.org

marinecoastalgis.net

How best to move forward with marine habitat mapping & modelling? Stay abreast of more than one community (e.g., GeoHab, EUSeaMap, etc.) Entrain more than one specialist (marine ecologists, geologists, physical oceanographers, GISers) Decision tree or matrix depending on scale, species (e.g., CMECS, EUNIS) Standard classification dictionaries, generic shallow-water dataset for all, w/testing tools (interdisciplinary technical working groups) “Semantic interoperability” of classification? What should be on the resulting maps? Concluding Thoughts

Related papers: More info: Thank you…