Conformational Analysis Newman Projections Ring Strain Cyclohexane Conformations.

Slides:



Advertisements
Similar presentations
4. Organic Compounds: Cycloalkanes and their Stereochemistry
Advertisements

Organic Chem I: lecture 9 by Doba Jackson, Ph.D.

Chapter 4 Alkanes & Cycloalkane Conformations. Conformations of Alkanes: Rotation about Carbon–Carbon Bonds.
1 Fall, 2009 Organic Chemistry I Cycloalkanes Organic Chemistry I Cycloalkanes Dr. Ralph C. Gatrone Department of Chemistry and Physics Virginia State.
Chapter 4 Alkanes: Nomenclature, Conformational Analysis, and an Introduction to Synthesis.
Chapter 3 Structure and Stereochemistry of Alkanes
Chapter 31 Organic Chemistry, 7 th Edition L. G. Wade, Jr. Copyright © 2010 Pearson Education, Inc. Structure and Stereochemistry of Alkanes.
Alkanes Acyclic: CnH2n+2 Cyclic (one ring): CnH2n
CHE 311 Organic Chemistry I Dr. Jerome K. Williams, Ph.D. Saint Leo University.
Chapter 3 Alkanes and Cycloalkanes: Conformations and cis-trans Stereoisomers 1.
Stereochemistry of Alkanes and Cycloalkanes Based on McMurry’s Organic Chemistry, 6 th edition, Chapter 4 ©2003 Ronald Kluger Department of Chemistry University.
Iran University of Science & Technology
Chapter 4 Organic Compounds: Cycloalkanes and Their Stereochemistry
STRUCTURE, CONTINUED Dr. Clower CHEM 2411 Spring 2014 McMurry (8 th ed.) sections , , 7.2, 7.6.
Section 2.7 Conformational Isomerism. Stereoisomerism- isomer variations in spatial or 3-D orientation of atoms. One type of stereoisomerism is conformational.
Chapter 3 Alkanes and Cycloalkanes: Conformations and cis-trans Stereoisomers Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction.
4. Organic Compounds: Cycloalkanes and their Stereochemistry Why this chapter? Because cyclic molecules are commonly encountered in all classes of biomolecules:
Conformational Analysis. Conformations of Alkanes Relatively low energy barrier to rotation about C-C bonds (4 – 40 kJ/mole) Different shapes resulting.
Newman Projections and Conformational Isomers. Newman Projections Is a way to draw chemical conformations and views a carbon - carbon chemical bond from.
ERT 102 Organic Chemistry ERT 102/4 ORGANIC CHEMISTRY Alina Rahayu Mohamed School of Bioprocess Engineering, UniMAP
Conformations Staggered conformation: a conformation about a carbon-carbon single bond where the atoms on one carbon are as far apart from atoms on the.
© Prentice Hall 2001Chapter 21 Conformations of Alkanes: Rotation about C-C Single Bonds Different spatial arrangements of atoms that result from rotation.
1 CH 4: Organic Compounds: Cycloalkanes and their Stereochemistry Renee Y. Becker CHM 2210 Valencia Community College.
Carey Chapter 3 – Conformations of Alkanes and Cycloalkanes Figure 3.5.
Chapter 3 Alkanes: Nomenclature, Conformational Analysis, and an Introduction to Synthesis.
Chapter 4: Cyclohexanes and their Stereochemistry
Chapter 31 Organic Chemistry, 7 th Edition L. G. Wade, Jr. Copyright © 2010 Pearson Education, Inc. Structure and Stereochemistry of Alkanes.
Cycloalkanes and their Stereochemistry Chapter 4.
Organic Chemistry By Dr. Mehnaz Kamal Assistant Professor, Pharmaceutical Chemistry Prince Sattam Bin Abdulaziz University.
Chapter 3 Conformations of Alkanes and Cycloalkanes Conformations or Conformers or Rotamers; Different spatial arrangements of a molecule that are generated.
CYCLOALKANES 1. 2 Cycloalkanes Cycloalkanes have molecular formula C n H 2n and contain carbon atoms arranged in a ring. Simple cycloalkanes are named.
CHEMISTRY 2500 Topic #4: Conformations of Organic Molecules Fall 2014 Dr. Susan Findlay.
Organic Compounds: Cycloalkanes and Their Stereochemistry
4. Stereochemistry of Alkanes and Cycloalkanes Based on McMurry’s Organic Chemistry, 6 th edition, Chapter 4 ©2003 Ronald Kluger Department of Chemistry.
1 Organic Chemistry, Third Edition Janice Gorzynski Smith University of Hawai’i Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction.
Structure and Stereochemistry of Alkanes
4. Stereochemistry of Alkanes and Cycloalkanes. 2 The Shapes of Molecules The three-dimensional shapes of molecules result from many forces There is free.
Chapter 3 Conformations of Alkanes and Cycloalkanes.

Chapter 4 Organic Compounds: Cycloalkanes and their Stereochemistry
Alkanes and Cycloalkanes
Alkanes and Cycloalkanes
4.4 Relative Stability of Isomers
Interlude 2: Shapes of Cyclic Molecules
Carey Chapter 3 – Conformations of Alkanes and Cycloalkanes
Chapter 4 Organic Compounds: Cycloalkanes and their Stereochemistry
Molecular conformations
4. Organic Compounds: Cycloalkanes and their Stereochemistry
Stereochemistry of Organic Compounds
4. Organic Compounds: Cycloalkanes and their Stereochemistry
For cis-trans isomers to exist
Chapter 4: Cyclohexanes and their Stereochemistry
Cyclic Hydrocarbons.
Chap. 2 Alkanes: Nomenclature, Conformational Analysis, and an Introduction to Synthesis (Textbook:Chapter 4)
Cyclohexane Chair Conformations “Ring-Flip” Conformers
MOLECULAR CONFORMATION
Ring Strain = Angle Strain + Torsional Strain + Steric Strain
Chapter 4 Organic Compounds: Cycloalkanes and their Stereochemistry
3.9 Small Rings Cyclopropane Cyclobutane 25.
Page: 89.
Stereochemistry of Alkanes and Cycloalkanes
Conformations.
4. Organic Compounds: Cycloalkanes and their Stereochemistry
Alkanes and Cycloalkanes: Conformations and
Cyclopentane Planar cyclopentane would have no angle strain but very high torsional strain Actual conformations of cyclopentane are nonplanar, reducing.
Chemsketch files 1. Conformations of straight chain alkanes
Carey Chapter 3 – Conformations of Alkanes and Cycloalkanes
Carey Chapter 3 – Conformations of Alkanes and Cycloalkanes
4. Organic Compounds: Cycloalkanes and their Stereochemistry
Presentation transcript:

Conformational Analysis Newman Projections Ring Strain Cyclohexane Conformations

Views of Ethane

The Newman Projection

Rotational Conformations of Ethane

Definitions Conformations - Different spatial arrangments that a molecule can adopt due to rotation about sigma bonds. Staggered - A low energy conformation where the bonds on adjacent atoms bisect each other (60 o dihedral angle), maximizing the separation. Eclipsed - A high energy conformation where the bonds on adjacent atoms are aligned with each other (0 o dihedral angle).

60 o Rotation Causes Torsional or Eclipsing Strain

Types of Strain Steric - Destabilization due to the repulsion between the electron clouds of atoms or groups. Groups try to occupy some common space. Torsional - Destabilization due to the repulsion between pairs of bonds caused by the electrostatic repulsion of the electrons in the bonds. Groups are eclipsed. Angle - Destabilisation due to distortion of a bond angle from it's optimum value caused by the electrostatic repulsion of the electrons in the bonds. e.g. cyclopropane

Definitions Anti - Description given to two substitutents attached to adjacent atoms when their bonds are at 180 o with respect to each other. Syn - Description given to two substitutents attached to adjacent atoms when their bonds are at 0 o with respect to each other. Gauche - Description given to two substitutents attached to adjacent atoms when their bonds are at 60 o with respect to each other.

Propane Conformations: Larger Barrier to Rotation (link)link

Butane Conformations (C 2 -C 3 )

Gauche Interaction in Butane

2 Different Eclipsed Conformations

Strain Energy can be Quantified

Butane has Steric and Torsional Strain When Eclipsed

PE Diagram for Butane (link)link

1-Chloropropane

Saturated Cyclic Compounds

Cyclopropane Angle and Torsional Strain

Electron Density Map

All Dihedral Angles = 0 o

Cyclobutane is not Planar

Cyclopentane

Cyclohexane

Chair Conformation link to active site link to active site

Boat Conformation

How to Draw a Chair Conformation all opposite bonds are parrallel

Axial bonds and Equatorial bonds

Rings can Flip from one Chair Conformation to Another

Flipping Chair Conformations All axial bonds become equatorial All equatorial bonds become axial All “up” bonds stay up All “down” bonds stay down

Axial-up becomes Equatorial-up

Equatorial Conformation is Preferred (link)link

Axial Methyl group is Gauche to C 3 in the ring

Gauche Interactions are Flagged by Parallel H’s 1,3-Diaxial Interactions

Equatorial Methyl Group is Anti to C 3 in the ring

cis 1,3-Dimethylcyclohexane

trans 1,3-Dimethylcyclohexane

cis 1-Chloro-4-t-butylcyclohexane