Components of plant species diversity in the New Zealand forest Jake Overton Landcare Research Hamilton
Acknowledgements NVS data contributors and curators Simon Ferrier and Glenn Manion for development of GDM and collaboration on modelling
General Question Investigate components of richness Alpha diversity Beta diversity Gamma diversity How do these compare between groups? Approach: Use a new modelling technique, Generalised Dissimilarity Modelling (GDM) to estimate components of diversity
Components of diversity (sensu Cody 1986) Alpha diversity = local richness Beta diversity = turnover in species due to habitat or environment Gamma diversity = turnover in species due to geographic distance or barriers All three components contribute to regional richness
Presence- absence of all vascular plant species in each plot Plots approx 20x20 m (sometimes unbounded) Almost plots 1220 species NVS recce (= recon) plots Biotic Data
Mocoto herbs Variable abbrev.Description Geographic positionGeographic position of plot MATMean Annual Temperature TseasA measure of cold stress, relative to mean annual temperature MASMean Annual Solar Radiation DeficitVapor Pressure deficit VPDVapor Pressure deficit CalciumSoil Calcium AgeSoil age NTotal Soil Nitrogen AcidPAvailable P DrainSoil Drainage PsizeSoil Particle Size IndurSoil Induration SlopeTopographic slope DiscoastDistance to coastline NothoNothofagus abundance from Leathwick Environmental variables (spatial)
alpha diversity (local richness) beta diversity gamma diversity ‘dissimilarity’ ‘turnover’ ‘complementarity’ richness = f (rainfall, temperature, veg type …) dissimilarity = f ( (rainfall, temperature, veg type …), geographical separation) Modelling of richness: can be supplemented by modelling of compositional dissimilarity between locations: What is Generalised Dissimilarity Modelling?
Compositional dissimilarity between pairs of survey sites Environmental & geographical separation Generalised dissimilarity modelling (GDM) Biotic Information Environmental and Geog Space Ecological Space Same units scaled by importance Differing units and importance
All species model
Results 1 All species validation
Mocoto herbs All species Total species pool 1020 species Alpha diversity component = Proportion accounted for by local richness = Mean plot richness/ Total species pool Unexplained component = 1 – proportion deviance explained Gamma Diversity component = Proportion deviance explained by geography Beta Diversity component = Deviance explained by environment
Mocoto herbs All plant species Snails
Group# spplocal rich Ferns Lianes-epiphytes- parasites Trees Shrubs Dicot herbs Monocot herbs All Species
Results 1
Mocoto herbs All Ferns Shrubs Trees Monocot herbs Dicot Herbs
Mocoto herbs All species Dicot Herbs Ferns Monocot herbs Shrubs Trees
Biological survey data Environmental predictors Visualisation of spatial pattern in community composition Predicted distributions of species Constrained environmental classification Survey gap analysis Conservation assessment Climate-change impact assessment Generalised dissimilarity modelling Ferrier, S. et al (in press) Using generalised dissimilarity modelling to analyse and predict patterns of beta-diversity in regional biodiversity assessment. Diversity & Distributions
Ferrier, S. et al (2004) Mapping more of terrestrial biodiversity for global conservation assessment. BioScience 54:
Conclusions GDM is an exciting new tool for biodiversity analyses Its main application is for biodiversity modelling and planning, but it has promise for untangling components of diversity Plant species show relatively strong environmental influence and some geographic influence on turnover Groups differ in the explained turnover, and in relative importance of different variables.
test
Dense sampling relative to grain of compositional turnover - relatively few species, each with many records Sparse sampling relative to grain of compositional turnover - huge number of species, each with very few (or no) records Environmental space (beta diversity) Geographical space (gamma diversity) Environmental space (beta diversity)
An example from the arid rangelands of central Australia
Mocoto herbs All species
Mocoto herbs
All species
Environmental predictors Radiometrics – Total Count Landsat TM – Band 2 Radiation of Warmest Quarter Topographic Wetness Index Precipitation of Driest Period Isothermality Minimum Temperature of Coldest Period Elevation Diversity for 300m radius Landsat TM – PD54 vegetation index Mean Temperature of Wettest Quarter Radiometrics – Uranium f (Tc10d) f (Wetness) Biological response Bray-Curtis compositional dissimilarity between all pairs of 248 field survey sites (based on perennial woody plant species)
Models species turnover (dissimilarity) between locations as a function of geography and environment Uses matrix regression, using GLMs. Developed by Simon Ferrier, (Department of Environment and Conservation, Armidale New South Wales, Australia) Programmed by Glenn Manion, DEC, Armidale. What is Generalised Dissimilarity Modelling?
Mocoto herbs All species Dicot Herbs Ferns Monocot herbs Shrubs Trees
Ferns
test L-E-P
Monocot herbs
Shrubs
Trees
test Dicot Herbs
Ferns
test L-E-P
Monocot herbs
Shrubs
Trees