Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of.

Slides:



Advertisements
Similar presentations
Infrared spectroscopy of metal ion-water complexes
Advertisements

Understanding Complex Spectral Signatures of Embedded Excess Protons in Molecular Scaffolds Andrew F. DeBlase Advisor: Mark A. Johnson 68 th Internatinal.
Rotationally-resolved infrared spectroscopy of the polycyclic aromatic hydrocarbon pyrene (C 16 H 10 ) using a quantum cascade laser- based cavity ringdown.
SOLVENT EFFECTS ON IR MODES OF (R)-3-METHYLCYCLOPENTANONE CONFORMERS: A COMPUTATIONAL INVESTIGATION Watheq Al-Basheer Physics Department - King Fahd University.
H-atom Reaction Kinetics in Solid Parahydrogen Followed by Rapid Scan FTIR David T. Anderson Department of Chemistry, University of Wyoming Laramie, WY.
Today: IR Next time: (see our website!) Partition coefficient and partition calculations Separations of mixtures.
Infrared Spectroscopy of Doubly-Charged Metal-Water Complexes
VUV Spectroscopy of Astrophysical Ices Michael Davis.
 PART Requirements for Spectroscopic Techniques for Polymers 1. High resolution 2. High sensitivity (>1%) 3. High selectivity between molecular.
Infrared spectroscopy probing of blue-shifting C–HO hydrogen-bonded
Lecture 6 Raman spectra of carbon nanotubes. Infrared (IR) spectroscopy IR 700 nm3500 nm400 nm Visible light IR IR spectra can be used to identify the.
RI05: FTIR STUDIES OF THE PHOTOCHEMISTRY OF DEUTERATED FORMIC ACID IN A PARAHYDROGEN MATRIX David T. Anderson Department of Chemistry, University of Wyoming.
1 University of Petra Faculty of Science & Arts Department of Chemistry Seminar I.R Spectroscopy By Firas Al-ouzeh Supervisor : Nuha I. Swidan Summer 2007.
Terrance J. Codd*, John Stanton†, and Terry A. Miller* * The Laser Spectroscopy Facility, Department of Chemistry and Biochemistry The Ohio State University,
High resolution studies of the 3 band of methyl fluoride in solid para-H 2 using a quantum cascade laser A.R.W. McKellar *, Asao Mizoguchi, Hideto Kanamori.
1 60th International Symposium on Molecular Spectroscopy, Talk RG03, 23 June 2005, Ohio State University, Columbus, OH Approved for Public Release; Distribution.
Conformational Analysis of R-(+)-3-Methylcyclopentanone by IR Spectroscopy in Para-Hydrogen Crystal Watheq Al-Basheer 1,2, Shin Y. Toh 2, Jun Miyazaki.
1 62nd Ohio State University International Symposium on Molecular Spectroscopy, Talk TJ06, 19 June 2007, Columbus, OH. Approved for Public Release; Distribution.
Georg-August-Universitaet Goettingen Tobias N. Wassermann Institute of Physical Chemistry Goettingen 19/06/ st Ohio State University Symposium on.
The inversion motion in the Ne – NH 3 van der Waals dimer studied via microwave spectroscopy Laura E. Downie, Julie M. Michaud and Wolfgang Jäger Department.
In-situ Photolysis of Methyl Iodide in Solid Para-hydrogen and Solid Ortho-deuterium Yuki Miyamoto 1, Mizuho Fushitani 2, Hiromichi Hoshina 3, and Takamasa.
INFRARED-ACTIVE VIBRON BANDS ASSOCIATED WITH RARE GAS SUBSTITUTIONAL IMPURITIES IN SOLID HYDROGEN PAUL L. RASTON and DAVID T. ANDERSON, Department of Chemistry,
PROTON TRANSFER IN NEUTRAL PEPTIDES EXAMINED BY CONFORMATIONAL SPECIFIC IR/UV SPECTROSCOPY Sander Jaeqx 67th International Symposium on Molecular Spectroscopy.
Chapter 2: IR Spectroscopy Paras Shah
Dynamics in Solid Hydrogen below 4 K David T. Anderson Department of Chemistry, University of Wyoming Laramie, WY th International.
1 Ab initio and Infrared Studies of Carbon Dioxide Containing Complex Zheng Su and Yunjie Xu Department of Chemistry, University of Alberta, Edmonton,
1 A Study of Hydroxycyclohexadienyl Radical Absorption Using Time-Resolved Resonance Raman Spectroscopy Deanna O’Donnell University of Notre Dame Radiation.
Fang Wang & Timothy C. Steimle Dept. Chem. & BioChem., Arizona State University, Tempe, AZ,USA The 65 th International Symposium on Molecular Spectroscopy,
Probing the Dependence of the H 2 /D 2 + ICl/I 2 Entrance Channel Interactions on Intermolecular Orientation Joshua P. Darr, Andrew C. Crowther, and Richard.
1 STRUCTURE OF COLD, MIXED PARA-H 2 /D 2 CLUSTERS Russell Sliter & Andrey Vilesov University of Southern California Department of Chemistry OSU International.
Jet-FTIR Studies of Model Peptide Systems Corey A. Rice and Martin A. Suhm Institut für Physikalische Chemie Universität Göttingen Tammannstr. 6 D
SIMULTANEOUS COUNTER-ION CO- DEPOSITION: A TECHNIQUE ENABLING MATRIX ISOLATION SPECTROSCOPY STUDIES USING LOW-ENERGY BEAMS OF MASS-SELECTED IONS Ryan M.
Rotationally-Resolved Spectroscopy of the Bending Modes of Deuterated Water Dimer JACOB T. STEWART AND BENJAMIN J. MCCALL DEPARTMENT OF CHEMISTRY, UNIVERSITY.
Breaking the Symmetry in Methyl Radical: High resolution IR spectroscopy of CH 2 D Melanie Roberts Department of Chemistry and Biochemistry, JILA University.
Proton Sponges: A Simple Organic Motif for Revealing the Quantum Structure of the Intramolecular Proton Bond H+H+ H+H+ H+H+ H+H+ H+H+ H+H+ H+H+ H+H+ H+H+
1 61st International Symposium on Molecular Spectroscopy, Talk RI03, 22 June 2006, Ohio State University, Columbus, OH Approved for Public Release; Distribution.
ROTATIONAL SPECTROSCOPY OF CO SOLVATED WITH PARA-H 2 MOLECULES Paul Raston and Wolfgang Jäger Department of Chemistry, University of Alberta, Edmonton,
High Precision, Sensitive, Near-IR Spectroscopy in a Fast Ion Beam Michael Porambo, Holger Kreckel, Andrew Mills, Manori Perera, Brian Siller, Benjamin.
Bisulfate Dehydration at the Vapor/Solution Interface Probed by Vibrational Sum Frequency Generation Spectroscopy Aaron M. Jubb and Heather C. Allen 67.
Infrared Spectra of Chloride- Fluorobenzene Complexes in the Gas Phase: Electrostatics versus Hydrogen Bonding Holger Schneider OSU International Symposium.
Undergrad Students Michael Friedman Jesse Hopkins Brian Bresslauer
György Tarczay, Gábor Magyarfalvi
Detecting Hydrogen Atoms in Solid Parahydrogen using FTIR Spectroscopy RD03 - Cold Quantum Systems 1015 McPherson Lab 9:22 am Thursday, June 21,
Tao Peng and Robert J. Le Roy
Gas Phase Infrared Spectroscopy of Protonated Species Department of Chemistry University of Georgia Athens Georgia,
Institute of Chemical Sciences, School of Engineering and Physical Sciences, Heriot-Watt University Dipole Aligned Solids A Metastable Phase of Molecular.
High Pressure Raman Korea Univ. Dept. of Chemistry Seung-Joon Jeon Raman Study of Amino Acids at High Pressures Alanine and its mutimer crystal Korea University.
1 61 st International Symposium on Molecular Spectroscopy, Talk RD10, 22 June 2006, The Ohio State University, Columbus, OH Approved for Public Release;
The 70 th International Symposium on Molecular Spectroscopy, TH07, June 23, The 70 th Meeting of International Symposium on Molecular Spectroscopy,
INFRARED AND ULTRAVIOLET SPECTROSCOPY OF JET-COOLED 2-BENZYLPHENOL: I STRUCTURE AND LARGE-AMPLITUDE TORSIONAL MOTION CHIRANTHA P. RODRIGO, CHRISTIAN W.
Rotational Spectroscopy of OCS in Superfluid Helium Nanodroplets Paul Raston, Rudolf Lehnig, and Wolfgang Jäger Department of Chemistry, University of.
High Resolution Electronic Spectroscopy of 9-Fluorenemethanol (9FM) in the Gas Phase Diane M. Mitchell, James A.J. Fitzpatrick and David W. Pratt Department.
High-resolution mid-infrared spectroscopy of deuterated water clusters using a quantum cascade laser- based cavity ringdown spectrometer Jacob T. Stewart.
The Cl+H 2  HCl+H reaction induced by IR+UV irradiation of Cl 2 in solid parahydrogen Sharon C. Kettwich and David T. Anderson Department of Chemistry,
Initial Development of High Precision, High Resolution Ion Beam Spectrometer in the Near- Infrared Michael Porambo, Brian Siller, Andrew Mills, Manori.
Probing Exciton Dynamics in the Frequency Domain Paul L. Raston and David T. Anderson Department of Chemistry, University of Wyoming, Laramie, WY
Erin M. Duffy, Brett M. Marsh, Jonathan M. Voss, Etienne Garand University of Wisconsin, Madison International Symposium on Molecular Spectroscopy June.
Lineshape analysis of CH3F-(ortho-H2)n absorption spectra in 3000 cm-1 region in solid para-H2 Yuki Miyamoto Graduate School of Natural Science and Technology,
Infrared Spectroscopy of N-Methylacetamide in Solid Parahydrogen
Infrared Spectroscopic Studies of OCS Trapped in Solid Parahydrogen: Indirect Evidence of Large Amplitude Motions Morgan E. Balabanoff and David T. Anderson.
Mid-IR Direct Absorption/Dispersion Spectroscopy of a Fast Ion Beam
Morgan E. Balabanoff and David T. Anderson
PHOTODISSOCIATION OF FORMIC ACID ISOLATED IN SOLID PARAHYDROGEN Y
Quantum diffusion controlled chemistry: the H + NO reaction
Using IR Spectroscopy to Probe the Temperature Dependence of the H + N2O Reaction in Parahydrogen Crystals Fredrick Mutunga and David T. Anderson Department.
IR-Spectroscopy IR region Interaction of IR with molecules
IR-Spectroscopy IR region Interaction of IR with molecules
INFRARED SPECTROSCOPY Dr. R. P. Chavan Head, Department of Chemistry
International Symposium on Molecular Spectroscopy, June 22-26, 2015
Introduction During the last years the use of Fourier Transform Infrared spectroscopy (FTIR) to determine the structure of biological macromolecules.
Presentation transcript:

Investigation of the Amide I Band of N-Methylacetamide in Solid Parahydrogen using FTIR Spectroscopy Leif O. Paulson and David T. Anderson Department of Chemistry University of Wyoming, Laramie, WY Monday, June 22, 2009

Overview N-Methylacetamide Experimental setup Examination and discussion of the Amide I feature Summary

N-Methylacetamide (NMA) H H H H trans-N-Methylacetamide

NMA IR Transition 1 FWHM = 4.5 cm L. O. Paulson and D. T. Anderson. 61 st Ohio State University International Symposium on Molecular Spectroscopy, talk R008 (2006)

Why NMA? Amide I Vibrational Mode Simple model of peptide bond Well studied specimen Amide I mode is extremely sensitive to its environment 2 Large molecule to study Rationale and Challenges 2. K. E. Amunson and J. Kubelka. J. Phys. Chem. B. 111, 9993 (2007)

Producing Variable Amounts of Orthohydrogen and Parahydrogen 3,4 nH 2 pH 2 3. S. Tam and M. E. Fajardo. Rev. Sci. Instrum. 70, 1926 (1999 ) 4. Yoshioka, K., Raston, P. L., and D. T. Anderson. Int. Rev. Phys. Chem. 25, 469 (2006) Cryostat cold tip Fe(OH) 3 catalyst T=14-80K Obtain variable amounts of parahydrogen (pH 2 ) and orthohydrogen (oH 2 )

FTIR Beam nH 2 Bruker IFS 120 HR FTIR FTIR Beam MCT Detector BaF 2 substrate o/p converter Chemical dopant Synthesis of NMA-doped pH 2 Crystals 5 5. M. E. Fajardo and S. Tam. J. Chem. Phys. 108, 4237 (1998)

Experimental Setup pH 2 NMA FTIR

NMA Compared with Formic Acid 6 6. L. O. Paulson and D. T. Anderson. J. Phys. Chem. A. 113, 1770 (2009) NMA 0.005% oH 2 NMA 51% oH 2 Formic Acid 0.005% oH 2 Formic Acid 51% oH 2

Matrix Shift as a Function of oH 2 Concentration 7. J. Kubelka and T. A. Kiederling. J. Phys. Chem. A. 105, (2001) Gas phase NMA Amide I gas phase frequency 7 is 1731 cm % oH 2 51% oH 2 Δν matrix =ν para -ν gas (cm -1 ) 51% ortho0.005% ortho (1.59%)-23.5 (1.36%)

Intermolecular Interactions in the Matrix J=0 pH 2 J=1 oH 2

Matrix Shift Effect pH 2 oH 2 NMA ν=1 ν=0 Gas phase In pH 2 In pH 2 with trace oH 2 In pH 2 /oH 2 mixture 1731 cm cm cm cm -1

Frequency Shift due to Orthohydrogen Amount 0.005% oH 2 51% oH cm cm -1

The Environment of the Matrix NMA Temp. increases Increased diffusion 8 allows for oH 2 molecules to move about in the matrix at 4.3K There is a greater electrostatic interaction between the oH 2 quadrupole and NMA dipole moments, causing the oH 2 molecules to agglomerate around the NMA dopant 9 8. J. van Kranendonk. Solid Hydrogen (Plenum, New York, 1983) 9. K. Yoshioka and D. T. Anderson. J. Chem. Phys. 119, 4731 (2003) 1.8K4.3K

Temperature Effects 51% oH % oH K 4.36K 1.92K 1.83K 4.34K 1.65K

NMA Widths with Variable oH 2 Concentrations 0.005% oH 2 FWHM=4.5 cm -1 51% oH 2 FWHM=1.8 cm -1

NMA Matrix Environment at High Orthohydrogen Concentrations oH 2 pH 2 NMA NMA is surrounded by oH 2 molecules Results in a primarily homogeneous environment

Linewidths due to the Matrix Environment 0.005% oH 2 FWHM=4.5 cm -1 51% oH 2 FWHM=1.8 cm -1 Inhomogeneous Homogeneous Broad Asymmetric Narrow Symmetric

Summary NMA Amide I mode is extremely sensitive to its environment NMA Amide I mode remains broad in solid pH 2 due to residual oH cm cm cm cm -1 Δν p-o =ν ortho -ν para (cm -1 ) Formic AcidNMA NMA Formic Acid Red=0.005% oH 2 Blue=51% oH 2

Acknowledgments Dr. David T. Anderson Ms. Sharon C. Kettwich Ms. Elsbeth Klotz NSF for the funding Thank you for listening!! See S.C.K.’s talk on Wednesday