EBI is an Outstation of the European Molecular Biology Laboratory. DAS Client Libraries An easy way to create your own DAS client Leyla García UniProtTeam.

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Presentation transcript:

EBI is an Outstation of the European Molecular Biology Laboratory. DAS Client Libraries An easy way to create your own DAS client Leyla García UniProtTeam DAS Workshop 2-4 March 2011

How to consume DAS data?

How to build a DAS client?

DAS Client Library

DAS Client Libraries Bio::Das:: Lite Das.jsDasobertJDasJsDAS Web sitehttp://sourceforg e.net/projects/bio -das-lite m/dasmoth/dalli ance e- 3d.org/dasobert e.com/p/jdas le.com/p/jsdas LanguagePerlJavaScriptJava JavaScript ClientsEnsemblDallianceSpice, DAS Registry, Jalview UniProt DAS Validator Dasty3, GenExp (partially) AdvantagesSpeed, parallelisation, DAS 1.6E registry support Lightweight, no external dependencies, asynchronous support Modular, extensible Modular, extensible, parallelisation (soon) Easy to use, modular, extensible DisadvantagesRequires libcurlDesigned to support Dalliance Documentation, support for asynchronous requests Relies on XSD schemas Lack of documentation Version (Dalliance) DAS spec , , some , 1.6

Hands-on Slide 2 DAS architecture: Slide 3 Matrix: Pieces of lego: Lego Trunk: Lego DNA: Slide 4 Lego manual: Lego sets: Lego Ferrari: Lego yellow car: Lego green car: Slide 6 Lego towers: daslite_tutorial.htmlhttp:// daslite_tutorial.html