Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08.

Slides:



Advertisements
Similar presentations
Protein Structure and Physics. What I will talk about today… -Outline protein synthesis and explain the basic steps involved. -Go over the Chemistry of.
Advertisements

1.The amino acid monomer. Spot the similarity.
Pages 42 to 46.  Chemical composition  Carbon  Hydrogen  Oxygen  Nitrogen  Sulfur (sometimes)  Monomer/Building Block  Amino Acids (20 different.
Protein Structure & Function
Biology 107 Macromolecules II September 9, Macromolecules II Student Objectives:As a result of this lecture and the assigned reading, you should.
Polypeptides – a quick review A protein is a polymer consisting of several amino acids (a polypeptide) Each protein has a unique 3-D shape or Conformation.
Biology 107 Macromolecules II September 8, 2003.
1. Primary Structure: Polypeptide chain Polypeptide chain Amino acid monomers Peptide linkages Figure 3.6 The Four Levels of Protein Structure.
Proteins Structures Primary Structure.
Amino acid side chains stabilise the enzyme shape.
Daily Starter  Explain how a peptide bond is formed. (What is the reaction called and how does it happen?)
Proteins – p. 25
Diverse Macromolecules. V. proteins are macromolecules that are polymers formed from amino acids monomers A. proteins have great structural diversity.
 All amino acids have a common structure, but differ in their R groups.  The asymmetric carbon must have the four attachments in a particular order.
Objectives E – Recall the different structures of proteins and the test for proteins. C – Describe how a peptide bond is formed. Describe the different.
By Ben Harmon and Cody Lewis. Proteins are compounds that have nitrogen, carbon and hydrogen 20% of the human body contains proteins.
Regents Biology Proteins Regents Biology Proteins: Multipurpose molecules.
 Proteins have many different functions in the body  Structure – proteins help provide structure and support, make up muscles and bones.
ProteinShop: A Tool for Protein Structure Prediction and Modeling Silvia Crivelli Computational Research Division Lawrence Berkeley National Laboratory.
D. NUCLEIC ACIDS 1.ARE MADE OF THE ELEMENTS C,H,O,N,P.
PROTEINS. Learning Outcomes: B4 - describe the chemical structure of proteins List functions of proteins Draw and describe the structure of an amino acid.
Operone lac Principles of protein structure and function Function is derived from structure Structure is derived from amino acid sequence Different.
Proteins. Proteins Chains of amino acids Basic structure below:
Mrs. Einstein Research in Molecular Biology. Importance of proteins for cell function: Proteins are the end product of the central dogma YOU are your.
Investigating the three of the four major biological molecules, including structure and function within biological systems.
Protein Structure. Primary Structure  The primary structure is the sequence of amino acids, which is different for each protein.
Lecture 5 Web: pollev.com/ucibio Text: To: Type in:
Primary structure. Proteins Proteins contain Carbon (C), Hydrogen (H), Oxygen, Nitrogen (N) and sometimes Sulphur (S) The monomer units of proteins are.
Proteins A protein is a compound made of small carbon compounds called AMINO ACIDS There are 20 different kinds of AMINO ACIDS.
Protein- Secondary, Tertiary, and Quaternary Structure.
Protein Structure  The structure of proteins can be described at 4 levels – primary, secondary, tertiary and quaternary.  Primary structure  The sequence.
Proteins pp Proteins Proteins are used for: Amino acids.
Chapter Proteins: Secondary, Tertiary, Quaternary, and Denaturation.
Proteins Structure and Function. PROTEINS Proteins are essential to the structures and activities of life...
CMSC 120: Introduction to Computing: Visualizing Information 1/22/08.
Levels of Protein Structure. Why is the structure of proteins (and the other organic nutrients) important to learn?
Protein Structure and Function. Primary Structure  Made of amino acids covalently bonded together.
Levels of Protein Structure. Why is the structure of proteins (and the other organic nutrients) important to learn?
Proteins Lucie Kubalová. A protein (in Greek πρωτεϊνη = first element ) is a complex, high molecular weight organic compound that consists of amino acids.
Protein S&F (Option C). 20 Amino Acids 4 Levels of Protein Organization Primary Structure – the number and sequence of amino acids in a polypeptide.
Proteins.
Proteins Proteins are the building materials for the body.
Protein Proteins are biochemical compounds consisting of one or more polypeptides typically folded into a globular or fibrous form in a biologically functional.
Chapter 5 Proteins.
Proteins: Secondary, Tertiary, Quaternary, and Denaturation
Protein Proteins are found throughout living organisms.
Protein Folding Notes.
3.11 Proteins are essential to the structures and activities of life
Amino Acids and Proteins
Protein Synthesis and Protein Folding
Primary, secondary, tertiary and quaternary structures.
Chemical Structure of Proteins
Proteins Basic structure of an amino acid
. Nonpolar (hydrophobic) Nonpolar (hydrophobic) Amino Acid Side Chains
3. Proteins Monomer = Amino acids Globular in shape Or Spherical.
PROTEINS Polymers (long chains) of AMINO ACIDS
Diverse Macromolecules
Study Question: What are enzymes?
Topic: Proteins pg.19 EQ: Explain the structure & function of proteins.
Protein Structure Chapter 14.
بیوشیمی : پروتئین ها و لیپیدها
Amino Acids.
Proteins.
Proteins C, H, N, O, S 50% of the Dry Weight of Living Organisms
Daily Science In forming a protein, why is it important that every amino acid has the same structure of a carboxyl group on one side and amino group on.
Proteins.
Proteins Function Structure Denaturation.
Four Levels of Protein Structure
2.4 - Proteins.
Presentation transcript:

Emergent or Otherwise? CMSC/BIOL 361 Emergence 1/22/08

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity Collective Behavior UnexpectedUnpredictable ( From Goldstein 1999 )

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity Collective Behavior UnexpectedUnpredictable Viscosity (From

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity Collective Behavior UnexpectedUnpredictable Möbius Strip ( From Barrow 2007) ( From Polthier 2003 )

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity Collective Behavior UnexpectedUnpredictable Climate (From

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity Collective Behavior UnexpectedUnpredictable Tornado

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity UnexpectedUnpredictable Earthquakes (from the TERASHAKE simulation)

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity Collective Behavior UnexpectedUnpredictable Networks (From

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity Collective Behavior UnexpectedUnpredictable The World Wide Web (From Barrow 2007)

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity Collective Behavior UnexpectedUnpredictable Food Webs

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity Collective Behavior UnexpectedUnpredictable The Brain (From

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity Collective Behavior UnexpectedUnpredictable Brownian Motion

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity Collective Behavior UnexpectedUnpredictable Fractals

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity UnexpectedUnpredictable Allotropes DiamondGraphiteLonsdaleite BuckyballFullerines AmorphousNanotube

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity Collective Behavior UnexpectedUnpredictable Chemical Compounds (from Wikipedia)

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity Collective Behavior UnexpectedUnpredictable Minerals

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity UnexpectedUnpredictable Proteins N OH R H N O H R H N OH R H N O H R H N O H R H N O H R H N O H R H N O H R H Side chain H-bond Backbone Amino acid Proteins consist of a long chain of amino acids, the primary structure

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity Collective Behavior UnexpectedUnpredictable Proteins The constituent amino acids may encourage hydrogen bonding that form regular structures, called secondary structures The secondary structures fold together to form a compact 3-dimensional shape, called the tertiary structure  -helix  -sheet

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity Collective Behavior UnexpectedUnpredictable Proteins (From

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity Collective Behavior UnexpectedUnpredictable Cells

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity UnexpectedUnpredictable Flocking

Emergent Non-linearCoherentDynamicSelf-OrganizationComplexity UnexpectedUnpredictable Communities