How can we study pesticides impacts on marine phytoplankton ? Sabine Stachowski 1, Harold Anseaume 1, Dorothée Hureau 2, Gaël Durand 2, Denis de la Broise.

Slides:



Advertisements
Similar presentations
Phytoplankton absorption from ac-9 measurements Julia Uitz Ocean Optics 2004.
Advertisements

Proposed Solution: Phytoplankton community in Lake Fulmor, CA Proposed Solution: Phytoplankton community in Lake Fulmor, CA Characterization of the phytoplankton.
Yaron Fireizen, Vinay Rao, Lacy Loos, Nathan Butler, Dr. Julie Anderson, Dr. Evan Weiher ▪ Biology Department ▪ University of Wisconsin-Eau Claire From.
Suspended particle property variation in Gaoping Submarine Canyon Ray T. Hsu and James T. Liu Institute of Marine Geology and Chemistry, National Sun Yat-sen.
Spatial and vertical distribution of phytoplankton pigments in the eastern Atlantic sector of the Southern Ocean Angela Wulff & Sten-Åke Wängberg Marine.
Methods in Microbial Ecology
BIOTECHNOLOGY AND GENETIC ENGINEERING CRISTINA SALVADOR.
Aquarium Biogeography and Succession of Microbial Communities in Aquatic Built Environments Nitrification Results in Coral Pond 1 The nitrite levels in.
DNA basics DNA is a molecule located in the nucleus of a cell Every cell in an organism contains the same DNA Characteristics of DNA varies between individuals.
1 A Molecular Investigation of M. rubra pre-bloom Distribution in the Columbia River Estuary Deirdre Dr. Lydie Herfort, Frontline Mentor Dr. Peter Zuber,
Observation Hypothesis Experimental Design (including Methods) Results Inference Camp Wildness 2004 Ward Lab Research Project.
TEMPLATE DESIGN © Fingerprinting E. coli communities in Little Lagoon, AL to understand their potential sources Alice.
Polymerase Chain Reaction
Analysis of Hot Spring Microbial Mat
SIRLE TRESTIP University of Tartu Cagliari 2011
Microbial Community Biomarker in Barnegat Bay Evangelina Pena 1, Lora McGuinness 1, Gary Taghon 1, Lee Kerkhof 1 Introduction Efforts to remediate anthropogenic.
Stochastic effects for interacting microbial populations Rosalind Allen School of Physics and Astronomy, Edinburgh University eSI “Stochastic effects in.
Effect of viruses on bacteria-mediated C and Fe cycling M.G. Weinbauer CNRS-UPMC, UMR 7093 Villefranche-sur-mer.
Diversity of bacteria associated with Montastraea spp. across sea water quality gradient in the United States Virgin Islands S. Arora, M.E. Brandt, N.
SeaHARRE-3 : the third SeaWiFS HPLC Analysis Round Robin Exercise History 2 previous SeaHARRE exercises, coordinated by S. Hooker (NASA) and LOV:  1999:
DNA Profiling in Forensic Science. Introduction DNA Profiling is the analysis of DNA samples to determine if they came from the same individual. Since.
INTERREG IV A « 2 Mers Sea Zeeën » The DYMAPHY project is part of the European cross- border cooperation programme INTERREG IV A « 2 Seas ». The project.
RA-228 AND RA-226 FROFILES FROM THE NORTHERN SOUTH CHINA SEA Hsiu-Chuan Lin, Yu-Chia Chung and Chi-Ju Lin Institute of Marine Geology and Chemistry, National.
Dissipation of polar xenobiotics from pharmaceutical POCIS and suggestion of a performance reference compound N. Mazzella, T. Debenest, J. Grange, C. Madigou,
Microalgae - definitions ICE ALGAE Microalgae that live within the sea ice attached to ice crystals, or associated with the undersurface of the ice as.
Gel Electrophoresis A molecular biology tool. Purpose To separate and analyze/compare fragments of DNA.
Genetic Testing Jeopardy! Waterford Union High School.
DNA Profiling (DNA fingerprinting) pard/cleared.html.
Seasonal variations in mean water column temperatures in the northern GOA (obtained from IMS GLOBEC website ). The temperature.
Human Genomics. Writing in RED indicates the SQA outcomes. Writing in BLACK explains these outcomes in depth.
Chapter 10: Genetic Engineering- A Revolution in Molecular Biology.
University of Essex BIODEEP-WP3 Analysis of species diversity, community structures and phylogeny of microorganisms and meiofauna in the Mediterranean.
Comparison of Synechococcus and Prochlorococcus photosynthetic pigments and cell size Characteristic Prochlorococcus Synechococcus Primary photosynthetic.
Introduction As part of a study investigating phytoplankton diversity and physiology in the Western Pacific Warm Pool, we measured group-specific rates.
The Impact of Nutrients on Picophytoplankton Populations Along the Atlantic Coast Melinda Norris and Dr. Jessica Nolan Conclusions  The phytoplankton.
Current Genetic Techniques How can we use DNA today? Section 3 - Parts of Chapters 13 & 14.
The microbial world S. Cerevisiae (yeast) Mycobacterium tuberculosis.
University of Essex BIODEEP-WP3 Analysis of species diversity, community structures and phylogeny of microorganisms and meiofauna in the Mediterranean.
Higher Human Biology Unit 1 Human Cells KEY AREA 5: Human Genomics.
A technique used to analyze pigments in spinach leaves is shown
Growth Rates of Euphausiids in the Northern Gulf of Alaska in A.I. Pinchuk *, R.R. Hopcroft, K.O. Coyle Institute of Marine Science, University.
13-2: Manipulating DNA Biology 2. Until very recently breeders could not change the DNA of the plants/animals they were breeding Scientists use DNA structure.
Contribution of fungi activity for N 2 O emission in no-tillage with cover crop fields Zhaorigetu 1,2, T.Nishizawa 2, Y.Sato 2, M.Komatsuzaki 1, H.Ohta.
Chemical Profiling of Microalgae Communities Associated with Eelgrass Haley Nickerson, Dr. Cynthia G. Hays, and Dr. James R. Kraly Department of Chemistry.
Use of Slow Release Nitrogen Fertilizer and its effect on soil quality. Soil bacterial population Hernandez, Jorge D., Garcia, Rosalia. and Lightfoot,
Microbial Community Analysis in Monosodium-methanearsonate Treated Rice Soils Anil Somenahally 1, Terry Gentry 1, Richard Loeppert 1 and Wengui Yan 2 1.
MIC 203: ENVIRONMENTAL MICROBIOLOGY Quantitative Ecology: Numbers, Biomass and activities Course Teacher: Fazle Rabbi, Lecturer Microbiology program, MNS.
Clinical Laboratory Analysis of Immunoglobulin Heavy Chain Variable Region Genes for Chronic Lymphocytic Leukemia Prognosis  Philippe Szankasi, David.
Sixth Workshop of National Reference Laboratories for Parasites
DNA fingerprinting Synonyms DNA Profiling DNA typing DNA testing.
Biological adaptation to DHABs
Microbial Community Analysis of a Floating Island System in a Stormwater Wet Detention Basin Danielle Winter, Dessy Owiti, François Birgand, Terrence Gardner,
Gilda Carvalho, Cláudia Galinha, Teresa Crespo and Maria Reis
COURSE OF MICROBIOLOGY
Chapter 13.2 Manipulating DNA.
Profiling and Discovery of Novel miRNAs from Formalin-Fixed, Paraffin-Embedded Melanoma and Nodal Specimens  Zhihai Ma, Weng-Onn Lui, Andrew Fire, Soheil.
How are areas of DNA that don’t code for proteins (genes) used by our cells? How can we make use of these areas?
Analysis of Double-Stranded RNA from Microbial Communities Identifies Double- Stranded RNA Virus-like Elements  Carolyn J. Decker, Roy Parker  Cell Reports 
By Pete Kahn Mentors: Lydie Herfort and Peter Zuber
PCR -PCR replicates (or amplifies) the DNA many times so that a large enough sample can be analyzed.
Exposure to fluid shear stress modulates the ability of endothelial cells to recruit neutrophils in response to tumor necrosis factor-α: a basis for local.
Profiling and Discovery of Novel miRNAs from Formalin-Fixed, Paraffin-Embedded Melanoma and Nodal Specimens  Zhihai Ma, Weng-Onn Lui, Andrew Fire, Soheil.
Clinical Laboratory Analysis of Immunoglobulin Heavy Chain Variable Region Genes for Chronic Lymphocytic Leukemia Prognosis  Philippe Szankasi, David.
Volume 23, Issue 3, Pages (July 1999)
Typology and classification of coastal waters in Estonia
Volume 12, Issue 11, Pages (November 2005)
9-3 DNA Typing with Tandem Repeats
DNA Profiling Vocabulary
Julien Soudet, Pascale Jolivet, Maria Teresa Teixeira  Molecular Cell 
Replication Inhibitors Modulate Instability of an Expanded Trinucleotide Repeat at the Myotonic Dystrophy Type 1 Disease Locus in Human Cells  Zhi Yang,
Presentation transcript:

How can we study pesticides impacts on marine phytoplankton ? Sabine Stachowski 1, Harold Anseaume 1, Dorothée Hureau 2, Gaël Durand 2, Denis de la Broise 1 1 LUMAQ, Université de Bretagne Occidentale, 6 rue de l’université, Quimper, France. 2 Pôle Analytique des Eaux, 120 rue A. De Rochon, B.P. 52, Plouzané, France Aims : - to evaluate the possible impacts of pesticides on natural phytoplankton communities using in situ microcosms. - to test pesticides at concentrations occasionally detected in natural coastal environments, for their effects on microbial populations, - to develop a microcosm that would be representative of what really happens in a natural environment. MATERIALS AND METHODS Immersed structures The experimentations took place in the Glenan archipelago, ten nautic miles south from Concarneau, Brittany, France (Figure 1). Three structures which carry the microcosms were immersed at the north of Saint Nicolas island, a place usually protected from the swell (Figure 1 red point). Each structure could carry 36 two liters bottles. The structures were immersed at 4m from the surface, whatever the tide, hanging on a buoy (Figure 2). Previous experiments showed that such a depth allows to avoid photoinhibition. 4 experimentations were run during summer 2004, each one lasted 2 weeks. Figure 1 Figure 2 Microcosms Bottles were filled up with 200 µm filtered sea water. Pesticides were added in their commercial form (active substance + additives) at 0.1µg/L active substance. Xenobiotics were 5 herbicides (Bentazon, Dimethenamid, Glyphosate, Nicosulfuron, Sulcotrion), 1 insecticide (Chlorpyrifos-ethyl) et 1 fungicide (Epoxiconazol). A part of the bottles media was renewed every 2 or 4 days (5% of bottle volume per day). Communities characterization Bottles were collected and contents were, within 5 hours, filtered through a 0.22µm polysulfone membrane. DNA and pigments were extracted from the membrane stored at -20°C. - molecular fingerprinting using TTGE (Temporal Thermal Gradient Gel Electrophoresis) : DNA sequences coding for 16S or 18S rRNA were amplified by PCR. A thermal denaturing electrophoresis (TTGE) was run with PCR products. PCR products from different species can be separated as their sequences differ. This tool should allow to determine resistant or sensitive species. - pigment fingerprint : pigments were extracted in 95% methanol and analyzed using HPLC on a C8 column. See results below. PIGMENTS ANALYSIS RESULTS Figure 4 : The pigment distribution of the community was compared in controls and in Dimethenamid treated samples (0.1µg/L for 14 days). The standard deviation is low, which means that the experiments have a good repeatability. Both types of samples show pigment profiles closely similar. Only 4 peaks (Chlorophyl C3, X, Fucoxanthin, Chlorophyl A) exhibited significant differences (Mann-Whitney, 5%). We can see 2 types of effects : - Chlorophylle C3 and X values are enhanced compared to controls, - Fucoxanthin et Chlorophyll A values are at a lower level than controls. These results tend to show that Dimethenamid could have an effect on the 2 important pigments of the community at 440 nm, Fucoxanthin and Chlorophyll C3. This suggests a change in the relative distribution of phytoplankton populations. Figure 3 and 4 : Surface water and control microcosms samples show similar pigment profiles, even if we can see a diversity loss for the minor pigments at 440 nm : our microcosms seem to be quite well representative of the natural environment, in spite of its variations. CONCLUSION: - This method (in situ immersed microcosms) can maintain phytoplankton in conditions very close to those of the natural environment. - We illustrated that the effects of a pesticide at a realistic concentration (0.1µg/L) can be detected on populations maintained in these close to natural conditions. - Analysis in progress (flow cytometry, TTGE) could help us to better characterize these effects. Figure 3 : Evolution of the phytoplankton pigment composition in natural environment was observed during 18 days. Some pigments exhibited large fluctuations over time. This illustrates that phytoplankton composition can be widely modified over such short periods, due to modification of pigments in cells and/or in relative distribution of populations. Figure 3 Figure 4 ICSR , Brest Controls Dimethenamid Pigments percentages in controls and samples treated with Dimethenamid after 14 days of exposure at 0.1µg/L (average of 6 replicates) percentages of pigments in the sample Pigment fingerprint of phytoplankton from natural environment during 18 days (each bar represents an average of 6 replicates) Water column Bottles Chain (20m) Floats Buoy sediment 500 Kg concrete