Joint Sparse Representation of Brain Activity Patterns in Multi-Task fMRI Data 2015/03/21
Concepts fMRI(functional magnetic resonance imaging) BOLD(blood oxygenation-level dependent) Noninvasive Spatial resolution: mm Time resolution: about 1 second
Concepts Data of fMRI Field of view: 64*64 Slices: 32 acquisition time: 2s images: hundreds Type Rest Task
Concepts Experimental design Block-design Event-related design
Concepts fMRI data analysis Data-driven PCA 、 ICA 、 CA Model-driven GLM (SPM)
GLM Model i.e. where Y is observations, X is the design matrix.
GLM
Steps for SPM 1.Slice timing 2.Realignment 3.coregister 4.Segment 5.normalise 6.Smooth 7.Specify 1st-level
ICA Suppose the signal has the model The question is to find a matrix to estimate
Sparse representation
Problem Multi-task Capitalize on the joint information that may exist among tasks. The joint information is not usually directly examined. Data fusion
Multivariate methods in fusion
Idea This would result in a set of dictionaries and sparse coefficients. To obtain the joint relation of the results we would need to combine the sparse coefficients.
Framework Feature: an activation map for each task and each individual. use SPM
Model JSRA
Algorithm OMP(orthogonal matching pursuit) SVD(singular value decomposition)
Simulation A total of 20 simulated datasets that represent two groups of subjects, each with 10 datasets.
Simulation FP, FN, TP, TN
Simulation
Experiment Conditions
Experiment K=4
Experiment K=8
Experiment K=12
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