Recent key achievements in research computing at IU Craig Stewart Associate Vice President, Research & Academic Computing Chief Operating Officer, Pervasive Technology Labs at IU

License Terms Please cite this presentation as: Stewart, C.A. Recent key achievements in research computing at IU Presentation. Presented at: IBM corporate visit (Bloomington, IN, Oct 2005). Available from: Portions of this document that originated from sources outside IU are shown here and used by permission or under licenses indicated within this document. Items indicated with a © or denoted with a source url are under copyright and used here with permission. Such items may not be reused without permission from the holder of copyright except where license terms noted on a slide permit reuse. Except where otherwise noted, the contents of this presentation are copyright 2004 by the Trustees of Indiana University. This content is released under the Creative Commons Attribution 3.0 Unported license ( This license includes the following terms: You are free to share – to copy, distribute and transmit the work and to remix – to adapt the work under the following conditions: attribution – you must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work). For any reuse or distribution, you must make clear to others the license terms of this work.

Pervasive Technology Labs The mission of the Pervasive Technology Labs at Indiana University is to: perform leading-edge research based on the pervasiveness of information technology in our world, creating new inventions, devices, and software that extend the capabilities of information technology in advanced research and everyday lives; attract, encourage, educate, and retain the workforce of tomorrow for the State of Indiana and educate the residents of the State generally about the value of advanced technology; accelerate economic growth in the State of Indiana through the commercialization of new software and inventions; and develop an income stream through external grant funding and technology transfer revenue that will lead toward self-sustainability for the Labs. In carrying out its mission, the Pervasive Technology Labs will help Indiana University attain a position of international leadership in information technology research and enhance the prosperity of the entire State of Indiana. A commitment to research. A catalyst for economic development.

Community Grids Lab Director: –Geoffrey Fox Focus on Collaboration –Using the network to help groups work together. Information and Computing “Grid” Science Applications –Biocomplexity –Earthquake Science –New Cheminformatics Grant!

Open Systems Lab Director –Andrew Lumsdaine Software for Supercomputers and Science Tools for building very complex systems. Research Scientist –Kay Connelly SURG -Security for Ubiquitous Resources Group Electronic Patient Care Project

TeraGrid IU: Resource provider & GIG participant Collaborative development of new computer technologies and delivery of new scientific innovations IU Knowledge Base to be TeraGrid support tool

Gary Purdue West Lafayette Indianapolis Bloomington Statewide IT Infrastructure Richmond Chicago 1 TFLOPS SP 2 TFLOPS AVIDD 2.2 PB Archival Storage

Data Capacitor Reliable data services –Databases via web services –Metadata servers –Workflow tools –e.g. LEAD on TeraGrid, GIS services Short term storage –Data acts (sort of) as an incompressible fluid –Data bursts –Parallel I/O of many files –Hold data temporarily within workflows

INGEN Bioinformatics Genomics Proteomics Bioethics New animal models

Complements INGEN while building upon strengths of IU Bloomington Genomics, Proteomics, Metabolomics and Cytomics climb the level of biological hierarchies – what’s really in a cell New research labs in –Molecular Neurosciences –Molecular Evolutionary & Developmental Biology –Analytical Technology Development –Microbial Systems –Cell Signaling & Differentiation New Facility-based Centers in –Biochemical Analysis –Chemical Imaging & Assaying –Genomics & Bioinformatics –Computational Cytomics Major new facilities – 800MHz NMR, Greenhouse expansion, Supercomputer upgrade, transgenic mice facility

Grant & Tech Transfer Successes PTL – 6 business created; total of 8 enhanced METACyt – first investment already made Open Source Software –OpenMPI –NaradaBrokering –Life Science apps –Open source utilities –Security tools

Acknowledgments The material presented here has been supported by a number of funding agencies, including the following: –National Science Foundation under Grant No Any opinions, findings and conclusions or recommendations expressed in this material are those of the author and do not necessarily reflect the views of the National Science Foundation (NSF). –Grant number 1U24AA from NIAAA/NIH. Its contents are solely the responsibility of the authors and do not necessarily represent the official views of the NIAAA/NIH. –The Indiana Genomics Initiative. The Indiana Genomics Initiative of Indiana University is supported in part by Lilly Endowment, Inc." –Shared University Research grants from IBM, Inc. –State of Indiana (particularly through support of I-light Initiative and the 21 st Century Fund) The work described here was made possible by the faculty, students, and staff of Indiana University. Thanks especially to the staff of RAC, CPO, Telecommunications, PTL, UITS generally, the participants in the Indiana Genomics Initiative, and the participants in the METACyt Initiative.

For additional info rac.uits.indiana.edu/ uits.iu.edu/ metacyt.indiana.edu