Fig. S1. Carotenoid and chlorophyll composition of Arabidopsis Z-ISO mutants compared to wild type. Seedlings were grown for 6d on half strength MS plus.

Slides:



Advertisements
Similar presentations
Class I-A Class II-A Class II-B Class II- Basal Class I-B Class I Class II 0.1 Arabidopsis thaliana PHO1;H2 Capsella rubella PHO1;H Thellungiella.
Advertisements

Supplementary figure S3. Diagram showing the effects of removing data from particular organ types on the relative percentage of gene pairs showing reciprocal.
The Scarlet Runner Bean Genome: Contig By Eden Maloney.
PAG 2015 Justin Preece Jaiswal Lab, Oregon State University 13 January 2015.
Protein Structure Investigating DFR specificity in anthocyanin biosynthesis Fazeeda Hosein Sarasvati BahadurSingh Nigel Jalsa Cecilia Diaz David Gopaulchan.
Bikash Shakya Emma Lang Jorge Diaz.  BLASTx entire sequence against 9 plant genomes. RepeatMasker  55.47% repetitive sequences  82.5% retroelements.
Transcriptome sequencing - a case study in Piper
Figure S1_Yao Qin et al. Figure S1 Occurrence and distribution of trihelix family in different plant species. Red branches in the cladogram indicate that.
Supplemental Figure 1S. Alignment and phylogeny of CRY proteins. Comparison of the amino acid sequences of the DNA-photolyase domain (a) and FAD binding.
Gene Prediction and Phylogenetic Trees
Glycopeptide MS/MS Spectra Supplemental Data 2. gi| Vacuolar invertase 1 [Gossypium hirsutum] R.LFLFNNASGVNVK.A + Deamidated (NQ)
Figure S1. Effects of AVG, DIECA, DPI, NMMA, STA, and OKA on IbRPK expression in sweet potato (Ipomoea batatas cv. Tainung 57). Leaves with petiole cuts.
Cluster I. Cluster II Cluster III (contiued) Cluster IV.
Prospecting for Genes that Fueled the Green Revolution
Fig. S1. Amino acid sequence alignment of MYBS3 proteins. MYBS3 protein sequences of Arabidopsis thaliana (MYBH; NP_199550); (At3g16350; NP_188256), Glycine.
Supplementary Figures SHUGOSHINs and PATRONUS protect meiotic centromere cohesion in Arabidopsis thaliana Linda Zamariola 1, Nico De Storme 1, Katrijn.
Journal: Molecular Breeding Molecular characterization of allelic variation in spontaneous brown midrib mutants of sorghum (Sorghum bicolor L Moench) Sunita.
Supplemental material 1.Spraying with ethephon produces an ethylene physiological response. One-month-old seedlings were sprayed with different concentrations.
Supporting Figure S1A. Supporting Figure S1B: AtNCL 0.1 Supporting Figure S1. (a): Sequence alignment of AtNCL. Alignment of Arabidopsis AtNCL with proteins.
Supplementary Fig. 1. (A) PCR amplification of wheat TaHSP26 genomic, cDNA and ORF clones. (B) ORF and protein sequence of TaHSP26. An arrowhead indicates.
WSSP Chapter 10 Literature Search Where do you learn about the function of your gene? atttaccgtg ttggattgaa attatcttgc atgagccagc tgatgagtat gatacagttt.
Supplemental Fig. S1. Orange- and yellow-flowered cultivars of calendula used in this study. Alice OrangeOrange StarPompom OrangeOrange Gem Alice YellowGold.
Supplementary Fig 1. Multiple sequence alignment of nucleotide sequences from amplified region of different Oryza sativa lines and wild species of rice.
gDNA Atg1-F Atg2-F MW Supplemental Figure S1   Supplemental Figure S1. Agarose gel electrophoresis of the PCR products generated.
Supplementary Fig. 1 ClustalW (2.1) multiple sequence alignment and comparison of deduced partial protein sequences of SOS1 in root tissues of wheat genotypes.
7 angiosperm genomes OrthoMCL 7 taxa, 7-9 genes HaMStR Physcomitrella patens Orthologous groups (size ≥ 300aa, identity ≥ 60%) GO Ontology 15 genomes 3.
HKT1 form Arabidopsis relative extremophile Thellungiella work as Na/K co-transporter.
Fig. S2a. HPLC chromatogram of intracellular amino acid contents of Pseudomonas lurida NPRs3 grown at 4°C and 28°C.
International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – Melaku Gedil Molecular Geneticist/Breeder.
Family Orders Classes Scaffold length(Mb) Brassica rapa Cruciferae
Volume 2, Issue 5, Pages (September 2009)
Supplemental Figure S1: Appearance of sucrose gradients for isolation of the Chl-protein complexes from cells grown in Fe-replete (Fe+) or Fe-depleted.
S1 Table. The protein sequences Glycine max St8 MER3 and 18 homologous proteins used for phylogenetic analysis. S. No. Gene Name/ ID Protein type 1 Glyma.06G
a. ZEP ZEP Os04g Selmo Phypa Chlre CTF2B
Figure S1. Sequence alignment of Arabidopsis NodGS with other plant and fungal orthologues. Abbreviations are as follows: Populus trichocarpa (Ptr), Ricinus.
Additional file 9: Figure S2
Toward Systems Understanding of Leaf Senescence: An Integrated Multi-Omics Perspective on Leaf Senescence Research  Jeongsik Kim, Hye Ryun Woo, Hong Gil.
Volume 6, Issue 3, Pages (May 2013)
Kazimierz T. Tycowski, Mei-Di Shu, Joan A. Steitz  Cell Reports 
Identification and gene cloning of a new major allergen Cha o 3 from Chamaecyparis obtusa (Japanese cypress) pollen  Toshihiro Osada, MSc, Takafumi Harada,
The Role of Recently Derived FT Paralogs in Sunflower Domestication
Volume 8, Issue 7, Pages (July 2015)
Motif 1 Motif 3 Motif 6 Motif 2 Motif 5 Motif 4 Motif 4 Motif 1
Multiple sequence alignment and analysis of SOFL proteins.
Volume 3, Issue 4, Pages (July 2010)
Volume 10, Issue 1, Pages (January 2017)
Prediction of protein structure
The Ins and Outs of the Rice AGAMOUS Subfamily
Volume 10, Issue 6, Pages (June 2017)
Volume 8, Issue 8, Pages (August 2015)
Volume 1, Issue 2, Pages (March 2008)
Evolution of jasmonate and salicylate signal crosstalk
Amanda Ooi, Fouad Lemtiri-Chlieh, Aloysius Wong, Christoph Gehring 
Volume 26, Issue 13, Pages (July 2016)
Toward Systems Understanding of Leaf Senescence: An Integrated Multi-Omics Perspective on Leaf Senescence Research  Jeongsik Kim, Hye Ryun Woo, Hong Gil.
Volume 2, Issue 5, Pages (September 2009)
The Presence and Localization of Thioredoxins in Diatoms, Unicellular Algae of Secondary Endosymbiotic Origin  Weber Till , Gruber Ansgar , Kroth Peter.
Features of the Protein Encoded by the Ruby Transcript
Elizabeth S. Haswell, Elliot M. Meyerowitz  Current Biology 
Alignment of putative chicken HB-EGF to mammalian HB-EGF proteins and the domains of HB-EGF. Alignment of putative chicken HB-EGF to mammalian HB-EGF proteins.
How to search NCBI.
Alignment of the deduced amino acid sequences of the myosin light chain 2 (MLC2) proteins. Alignment of the deduced amino acid sequences of the myosin.
Volume 11, Issue 6, Pages (June 2018)
Comparison of the sequences of Fzo/Mfn and structure of mammalian Mfn2
Volume 1, Issue 1, Pages (January 2008)
OsELF3 Is Involved in Circadian Clock Regulation for Promoting Flowering under Long- Day Conditions in Rice  Ying Yang, Qiang Peng, Guo-Xing Chen, Xiang-Hua.
Subcellular Localization of At4g19010
Functional Insights of Plant GSK3-like Kinases: Multi-Taskers in Diverse Cellular Signal Transduction Pathways  Ji-Hyun Youn, Tae-Wuk Kim  Molecular Plant 
Volume 2, Issue 6, Pages (November 2009)
Volume 3, Issue 2, Pages (March 2010)
Presentation transcript:

Fig. S1. Carotenoid and chlorophyll composition of Arabidopsis Z-ISO mutants compared to wild type. Seedlings were grown for 6d on half strength MS plus 1% sucrose in the light at 25 0 C. w.t.(Col), zic1-1 and zic1-2. N, (neoxanthin); V, (violaxanthin); L, (lutein); Cb (Chlorophyll b); Ca (Chlorophyll a), β, (β-carotene) were marked. HPLC chromatogram is shown at 450 nm. zic1-1 NV L Cb Ca β

Fig. S2A. Alignment of Z-ISO amino acid sequences from Zea mays (Z-ISO_Zm), Sorghum bicolor (Z-ISO_Sm), Oryza sativa japonica (Z-ISO_Os), Phyllostachys edulis (Z-ISO_Pe), Brachypodium distachyon (Z-ISO_Bd), Solanum lycopersicum (Z-ISO_Sl), Ricinus communis (Z-ISO_Rc), Populus trichocarpa (Z-ISO_Pt), Vitis vinifera (Z-ISO_Vv), Medicago truncatula (Z-ISO_Mt), Glycine max (Z-ISO_Gm), Arabidopsis thaliana (Z-ISO_At), Picea sitchensis (Z-ISO_Ps), Volvox carteri (Z-ISO_Vc), Physcomi trelapatens (Z-ISO_Pt), Thalassiosira pseudonana (Z-ISO_Tp), Prochlorococcus marinus str. MIT9211 (Z-ISO_Pm), Synechococcus elongatus PCC 6301(Z-ISO_Se). Alignment was performed by ClustalW using MEGA3.1. Protein sequences were obtained from NCBI ( and Genbank accession numbers are listed in Table S2.

Fig. S2A., continued

Fig. S2B. Alignment of Z-ISO amino acid sequences from Zea mays (Z-ISO_Zm), Oryza sativa japonica (Z-ISO_Os), Solanum lycopersicum (Z- ISO_Sl), Medicago truncatula (Z-ISO_Mt), Arabidopsis thaliana (Z-ISO_At), Picea sitchensis (Z-ISO_Ps), Thalassiosira pseudonana (Z-ISO_Tp), Synechococcus elongatus PCC 6301(Z-ISO_Se), and NnrU from Sinorhizobium meliloti 1021 (NnrU_Sm), Hyphomonas neptunium ATCC (NnrU_Hn); Rhodobacter sphaeroides ATCC (NnrU_Rs), Rhodopseudomonas palustris HaA2 (NnrU_Rp). Alignment was performed by ClustalW using MEGA3.1. Protein sequences were obtained from NCBI ( and Genbank accession numbers are listed in Table S2. Abbreviations in the consensus sequences shown at the bottom are as in Figure S2A. Predicted transmembrane domains for selected species (4) are marked with boxes.

Fig. S2B., continued