The William and Linda Steere Herbarium The New York Botanical Garden

Slides:



Advertisements
Similar presentations
AUSTRALIA’S VIRTUAL HERBARIUM
Advertisements

Migrating Entomologys Collection Management System to EMu Adrian Hine.
Processing New Herbarium Collections Using EMu The last bits of paper Nicole Tarnowsky.
April 2011 Registry Prototype demonstration. Relationships between records.
Databasing and Digitization of a Smaller Herbarium at a Smaller Institution it CAN be done and funded, too.
SWITCH (S OUTH W EST I DAHO : T HE C OMPREHENSIVE H ERBARIUM ) Alexa DiNicola, The College of Idaho Dr. Don Mansfield, The College of Idaho Dr. James Smith,
Collections Management Natural History Museums eMoo in the Americas.
NYBG + KE EMu The New York Botanical Garden + KE EMu Melissa Tulig Botanical Information Management.
Herbaria and Database Systems Michael G. Simpson.
Web-based Specimen Databasing: Lessons from the Plant Bug Planetary Biodiversity Inventory Project presented by Randall T. Schuh Curator and Chair Division.
Implementation of KE EMu at The New York Botanical Garden Barbara Thiers Anthony Kirchgessner Shannon Dominick Emily Ashley Melissa Tulig.
National Herbarium of New South Wales Royal Botanic Gardens & Domain Trust, Sydney New South Wales Flora Online Karen Wilson and Gary Chapple.
Publish or perish? Linking Scratchpads and the new Biodiversity Data Journal for streamlining publication of botanical data D.N Koureas 1, L. Penev 2 &
Order from Chaos: Development and Implementation of NMAI's Culture Thesaurus Ann McMullen, Curator, National Museum of the American Indian North American.
Computerization of Large Collections: Challenges, Benefits and Lessons Learned Barbara M. Thiers Director of the Herbarium New York Botanical Garden.
IDigBio is funded by a grant from the National Science Foundation’s Advancing Digitization of Biodiversity Collections Program (Cooperative Agreement EF ).
1 Adaptive Management Portal April
Milan Janák Field Mapping Training Workshop, 13 – 17 June, 2011 Instructions for field inventory of species in Montenegro listed under Habitats Directive.
Computerization of the Lichen Collection at the Michigan State University Herbarium Andrew J. JOHNSON, Alan M. FRYDAY & L. Alan PRATHER Herbarium, Department.
Collections Management KE EMu Spatial Technologies Turning information into knowledge.
Biodiversity and Climate Change
Program Wednesday – Welcome and presentation, coffee – Presentation of Picturae – digitization projects (how much time do you.
Virtual Federal Herbarium Prototype. What is a virtual federal herbarium? A “library” of specimen data and images of plants and fungi A searchable public.
Building Capacity for Plant Biodiversity Inventory and Conservation in Nepal RONAST.
EMu and Archives NA EMu Users Conference – Oct Slide 1 EMu and Archives Experiences from the Canada Science and Technology Museum Corporation.
The Macroalgal Herbarium Consortium ACCESSING 150 YEARS OF SPECIMEN DATA TO UNDERSTAND CHANGES IN THE MARINE/AQUATIC ENVIRONMENT.
NSF EF Welcome to Summit III University of Florida Florida State University.
Integrative research using digitized specimens: examples from the Consortium of California Herbaria Brent Mishler University and Jepson Herbaria University.
Magnolia grandiFLORA: digitally linking herbaria to support botanical research and education in Mississippi Collaborators Delta State University: Nina.
What’s Important Is Information … and We Have Specimens, Too! Neftali Camacho and Darolyn Striley Natural History Museum of Los Angeles County We use databases.
The Macroalgal Digitization Project Chris Neefus, Department of Biological Sciences University of New Hampshire, Durham, New Hampshire.
Presented by: Michael Bevans Information Manager for Digitization
P.W. Sweeney Yale Peabody Museum of Natural History Mobilizing New England vascular plant data to track environmental change: an overview and preliminary.
My Resource for Excellence. Canadian Heritage Information Network Creation of the Collections Management Software Review (CMSR) Heather Dunn, CHIN.
OCR implementation in The Caribbean Plants Digitization Project A project to image and catalog over 150,000 Caribbean specimens at the New York Botanical.
Field Work, Herbaria, Databases, Floras, and Monographs for Plant Systematics Spring 2014.
Introducing Australia’s Virtual Herbarium (AVH) 3 Ben Richardson Western Australian Herbarium, Department of Environment and Conservation / CHAH / HISCOM.
University of Florida Florida State University
 How are changes in distribution patterns of lichens and bryophytes over time correlated with man-made environmental changes?  How accurately can we.
Digitization of Natural History Collections (DIGIT) Larry Speers Program Officer Digitization of Natural History Collections Data TDWG Annual Meeting Oct.
Distribution Maps Mary E. Barkworth Intermountain Herbarium, Utah State University, Logan, Utah
Information for decision making Migrating from fragmented visions to solve punctual problems (reacting to crisis) to Systemic and integrated approaches.
The Macroalgal Herbarium Consortium ACCESSING 150 YEARS OF SPECIMEN DATA TO UNDERSTAND CHANGES IN THE MARINE/AQUATIC ENVIRONMENT.
3 / 12 Databases MIS105 Lec13 Irfan Ahmed Ilyas CHAPTER Prepared By:
Global Biodiversity Information Facility GLOBAL BIODIVERSITY INFORMATION FACILITY Meredith A. Lane CODATA/ERPANET Workshop: Scientific Data Selection &
Index Herbariorum An Overview Barbara M. Thiers Biodiversity Collections Index Kick-Off Meeting U.S. Natural History Museum,28-29 Jan 2008.
SCOR Meeting on Coordination of International Marine Research Projects The Scientific Committee on Oceanic Research (SCOR) convened a meeting on Coordination.
Biocode Field Information Management System (FIMS) John Deck, UC Berkeley TDWG, 2014.
IDigBio is funded by a grant from the National Science Foundation’s Advancing Digitization of Biodiversity Collections Program (Cooperative Agreement EF ).
The Macroalgal Herbarium Consortium Accessing 150 Years of Specimen Data to Understand Changes in the Marine/Aquatic Environment Janet Sullivan and Chris.
AN EMu BASED ELECTRONIC MONOGRAPH OF THE BRAZIL NUT FAMILY Scott A. Mori Nathaniel Lord Britton Curator of Botany.
KE Software presentation at: Icelandic Institute of Natural History 9 September 2005.
DIGITAL FLORA La Selva Biological Station Website: Supported by:
KE EMu, the world’s premier collections management software.
Scratchpads and the new Biodiversity Data Journal Biodiversity Data Publishing made… easier Dimitris Koureas Natural History Museum London.
Context: The Strategic Plan for Establishing the Network Integrated Biocollections Alliance Judith E. Skog, Office of the Assistant Director, Biological.
H I S C O M Flora information Partnership Barry Conn Royal Botanic Gardens Sydney Council of Heads of Australian Herbaria.
A superior collections management system for the world’s largest: Museums Art Galleries Historical Societies Herbaria Botanic Gardens KE EMu.
HISCOM An Australian Virtual Herbarium Jim Croft Australian National Herbarium.
Darrell Siebert The MOA Programme: Did we really do that?
 Research Question  Goals and Scope  Digitization Workflow  Geo-referencing  Dissemination  Outreach and Crowd Sourcing.
Mediterranean Plant Collections: The computerised way forward.
Riccardi: DIALOGUE Workshop August 1, 2005 Supported by NSF BDI 1 Representing and Using Phylogenetic Characters in Morphbank Greg Riccardi, David Gaitros,
AUSTRALIA’S VIRTUAL HERBARIUM A national collaborative model for integrated access to distributed biological information Australian National Herbarium.
IABIN Species and Specimens Thematic Network (SSTN) IABIN Executive Committee/Coordinating Institution Meeting. Tierras Enamoradas, Costa Rica. February.
Collections Management A superior collections management system for the world’s largest: Museums Art Galleries Historical Societies Herbaria Botanic Gardens.
The CompTox Chemistry Dashboard: an informational data hub at the
BASIC INFORMATION ABOUT DATABASE MANAGEMENT SOFTWARE
RCN Development of an Online Database to Enhance the Conservation of SGCN Invertebrates in the Northeastern Region James W. Fetzner Jr. & John.
Field Work, Herbaria, Databases, Floras,
Presentation transcript:

The William and Linda Steere Herbarium The New York Botanical Garden The Projeto Flora Amazônica field books: An excellent resource for improving data input efficiency D. Shannon Asencio The William and Linda Steere Herbarium The New York Botanical Garden

The William and Lynda Steere Herbarium Steere Herbarium (NY) is among the four largest in the world (ca. 7 million specimens); largest in the western hemisphere All plants groups represented, as well as fungi and lichens Emphasis on New World flora, with particular strength in Brazilian specimens

Collections digitization at NY Started 17 years ago KE EMu (Electronic Museum) software System of nested modules Good choice for integrating data previously generated in NYpc Used for maintaining Index Herbariorum, a global directory of public herbaria and associated staff American Botanical Literature searchable database Curator research web pages

Projeto Flora Amazônica Bi-national effort between Brazil and U.S. Initiated in January 1976 First expedition took place late 1977 25 expeditions Fieldwork completed 1987 Prance et al., 1984

Programa Flora Four principal objectives: To produce as complete an inventory as possible of the plant resources of Brazil To make the data gathered available in an easily accessible format so that it can be used for the social and economic benefit of humans To establish regional research centers throughout Brazil capable of carrying out the inventory on a local basis, in preparation for studies on economic uses of plants, ecological challenges, and environmental conservation To encourage the education and training of Brazilian botanists, particularly in plant systematics and data management, through graduate courses and training programs Prance et al., 1984

Amazon Digitization Project Started in January 2008 Goal: to catalogue and image all NY specimens from the Brazilian Amazon Initial approach: skeletal records Later approach: complete geographical data Data repatriation: Instituto Nacional de Pesquisas da Amazônia (INPA) Google Maps

Methods for improving rapid data entry Importation of duplicate specimen data from other institutions Querying nearby collection data Mass collection data input using collector field books

Field books in the archives of NY

Field books – sample layout Plant family Plant description Collection locality No. of duplicates Determination Collection no. Collection date Habitat

Collection data input

The product

Results A total of 53,920 specimen collection events created using field books Average of 641 collection records created each day using this method Productivity as high as 1,557 records created in a single day Cataloguing rates up ca. 50%

Caution! Older field books can be difficult to read and interpret Collection numbers are not necessarily unique identifiers Separate data sources (e.g. field books vs. labels): possible inconsistencies Data must be validated!

Conclusions It is worth exploring a variety of data sources, especially when undertaking large-scale cataloguing projects Using data gathered in the field (i.e. field books) is an effective method for improving the work flow of databasing projects Naturally grouped data, such as field book entries, are easy to enter collectively and can provide comparable data quality to specimen labels These advantages to data entry can be applied to any type of specimen cataloguing, not just botanical cataloguing

Acknowledgements National Science Foundation Barbara Thiers, Michael Bevans, Anthony Kirchgessner, Melissa Tulig, Benito Santos, Nicole Tarnowsky, Stephen Gottschalk, Benjamin Saracco, and several volunteers Visit the Virtual Herbarium: http://sciweb.nybg.org/science2/vii2.asp