FUNCTIONAL VARIANT OF THE ANXA11 GENE: TRUE MARKER OF PROTECTION AND CANDIDATE DISEASE MODIFIER IN SARCOIDOSIS Stahelova A 1, Mrazek F 1, Kriegova E 1,

Slides:



Advertisements
Similar presentations
ASSOCIATION OF HLA-C*06 WITH SUSCEPTIBILITY TO PSORIATIC ARTHRITIS AND ITS CLINICAL PHENOTYPE IN ROMANIA O. M. Popa1, L. Popa2, M. I. Dutescu3, M. Bojinca4,
Advertisements

EPIDEMIOLOGY AND GENETICS OF ALZHEIMER´S DISEASE
Genetic research designs in the real world Vishwajit L Nimgaonkar MD, PhD University of Pittsburgh
Genetic Analysis in Human Disease
The NIHR Cambridge BioResource A means of correlating disease susceptibility genotypes with phenotypes Bringing together local people and leading research.
 Place: New York State  Population: 10,000,000  Character of the disease: caused by the recessive allele and the recessive homozygous genotype is 100%
ASSOCIATION OF MCP-1/CCL2 GENE POLYMORPHISM WITH ACUTE GRAFT VERSUS HOST DISEASE AFTER ALLOGENEIC HAEMATOPOIETIC STEM CELL TRANSPLANTATION Z. Ambruzova.
Prostacyclin Promoter Polymorphism is Associated with Severity of Infant Respiratory Viral Infection S Van Driest 1, T Gebretsadik 3, P Moore 2, S Reiss.
For example: Sickle Cell Anemia and Evolution Your name.
1 FSTL4 and SEMA5A are associated with alcohol dependence: meta- analysis of two genome-wide association studies Kesheng Wang, PhD Department of Biostatistics.
Class activity: What are my asthma variants doing? In the subset of individuals for whom expression data are available, the T nucleotide allele at rs
Evaluation of the genetic impact on inflammatory bowel disease Natalie Bibb Trainee Project KGC.
Unusual reaction to an influenza vaccination Primary Care Conference Clinical Case Presentation Rebecca Byers MD April 12, 2006.
Cost-Conscious Care Presentation Follow-up Chest X-Ray in Patients Admitted for Community Acquired Pneumonia Huy Tran, PGY-2 12/12/2013.
Single nucleotide polymorphisms in genes for cytokines interleukin (IL)-2, IL-6 and TNFalpha influence severity of osteolysis after total hip arthroplasty.
Understanding Genetics of Schizophrenia
Promoter polymorphism of macrophage Migration Inhibitory Factor (MIF) gene in Czech and Russian patients with myocardial infarction Promoter polymorphism.
Association study of 5-HT2A genes with schizophrenia in the Malaysian population: A Multiethnic Meta- analysis Study Shiau Foon Tee* 1, Tze Jen Chow 1,
Biomedical Research Objective 2 Biomedical Research Methods.
Genotypes and phenotypes in Anorexia Nervosa A gene-association study.
Chemokine network in pulmonary sarcoidosis Petrek M, Kriegova E, Fillerova R, Arakelyan A, Mrazek F, Hutyrova B, Kolek V, du Bois RM* Laboratory of Immunogenomics.
Prospective Evaluation of B-type Natriuretic Peptide Concentrations and the Risk of Type 2 Diabetes in Women B.M. Everett, N. Cook, D.I. Chasman, M.C.
The Role of Interleukin-10 in Eosinophilic Esophagitis Neeraj Maheshwari, Joseph D. Sherrill, Emily M. Stucke, Marc E. Rothenberg Division of Allergy and.
From Genome-Wide Association Studies to Medicine Florian Schmitzberger - CS 374 – 4/28/2009 Stanford University Biomedical Informatics
Two RANTES gene polymorphisms and their haplotypes in patients with myocardial infarction from two Slavonic populations Two RANTES gene polymorphisms and.
Complement Factor H Polymorphism in Age- Related Macular Degeneration* *Klein RJ, et al. Science. 2005; 308:
Melanie Dunn 9/20/2011.  Rheumatoid arthritis (RA) is a chronic disease that leads to inflammation of the joints and surrounding tissues that can also.
First Author: Radu Cristina Co-Authors: Stefan Anda Tripon Florin Crauciuc George Coordinators: Banescu Claudia, MD Demian Smaranda, MD The importance.
Chemokine mRNA expression profiling in pulmonary sarcoidosis Kriegova E, Fillerova R, Arakelyan A, Mrazek F, Hutyrova B, Kolek V, du Bois R*, Petrek M.
Role of CTLA-4 polymorphism in susceptibility to type 1 diabetes: Results of a family and a case-control study in Southern Tunisia Immunology Department,
Polymorphisms in the CRP and C1 Q genes and schizophrenia in Armenian population: A pilot study Zakharyan R 1,2, Khoyetsyan A 1, Chavushyan A 1, Arakelyan.
Supported by Czech Govt. Funding MSM
Association of functional polymorphisms of Bax and Bcl2 genes with schizophrenia Kristina Pirumya, PhD, Laboratory of Human Genomics and Immunomics Institute.
BIOSTATISTICS Lecture 2. The role of Biostatisticians Biostatisticians play essential roles in designing studies, analyzing data and creating methods.
GENETIC MARKERS OF CORONARY ARTERY DISEASE RISK GALYA ATANASOVA MD, PhD DOMINIC JAMES.
Statistical Analysis of Candidate Gene Association Studies (Categorical Traits) of Biallelic Single Nucleotide Polymorphisms Maani Beigy MD-MPH Student.
Peripheral Artery Disease in Orthopaedic Patients with Asymptomatic Popliteal Artery Calcification on Plain X-ray Adam Podet, MS; Julia Volaufova, phD,;
 2011 Mayo Foundation for Medical Education and Research Novel late-onset Alzheimer’s disease loci variants associate with brain gene expression Mariet.
Genetics of IPF/fibrosing ILDs Paolo Spagnolo Clinica di Malattie dell’Apparato Respiratorio Università degli Studi di Padova.
Chemokine RANTES –403 G/A polymorphism in two Slavonic populations with myocardial infarction Tereshchenko IP 1,2, Petrkova J 2,3, Mrazek F 2, Navratilova.
SCANNING OF CANDIDATE GENES FOR THE SUSCEPTIBILITY OF KAWASAKI DISEASE IN THE HLA REGION Lee JK, Kim JJ, Kim S, Choi IH, Kim KJ, Hong SJ, Seo EJ, Yoo HW,
By: Dr Khalid El Tohami INTRODUCTION TO PUBLIC HEALTH AND EPIDEMIOLOGY (1)
Genome-Wides Association Studies (GWAS) Veryan Codd.
Conclusions: Results : Methods: We prospectively recruited 50 women with recurrent pregnancy loss mean age 33.0 (±5.4) years and 30 healthy controls mean.
Date of download: 7/2/2016 Copyright © 2016 American Medical Association. All rights reserved. From: How to Interpret a Genome-wide Association Study JAMA.
Date of download: 7/2/2016 Copyright © 2016 American Medical Association. All rights reserved. From: Clinical Interpretation and Implications of Whole-Genome.
Genetic Susceptibility Variations and Visual Field Progression in Singaporean Chinese Patients with Primary Angle Closure Glaucoma 1 Duke-National University.
Student of Cellular and Molecular biology
Absence of association between IL-28B gene polymorphism (rs SNP) and sustained virological response in Iranian patients with chronic Hepatitis.
Peng Yin1, Andrea L Jorgensen1, Andrew P Morris1, Richard Turner2, Richard Fitzgerald2, Rod Stables3, Anita Hanson2, Munir Pirmohamed2 1. Department of.
  PROGNOSTIC SIGNIFICANCE OF GENE MUTATIONS IN MDS DEPENDS ON THE LOCI OF GENE VARIANCES PROGNOSTIC SIGNIFICANCE OF GENE MUTATIONS IN MDS DEPENDS ON THE.
Institute of Oncology, Riga, Latvia
Hadley KEY SLIDES 9-5 7:45-8:15 PM
Analysis of the composite 5-HTTLPR/rs25531 polymorphism in premenstrual dysphoric disorder Conclusion These data do not support a major role for rs25531or.
^ Chest Diseases Ministry of health, Egypt
Contribution of Oxidized Low Density Lipoprotein and Nitric Oxide in the Pathogenesis of Early Onset Acute Myocardial Infarction in Egyptian population.
Whole Genome Methylation and MTHFR (C677T) polymorphism in Alcohol Dependence Bhagyalakshmi Shankarappa; Anirrudh Basu; Shwetha Byrappa; Rashmi Chandra;
non- Lofgren's Patients
A pilot study of Vitamin D Receptor TaqI and ApaI Gene Variants in adult asthma Katrina Hutchinson MD Senior Clinical Biochemist at Biomnis Ireland School.
Age at First Measles-Mumps-Rubella Vaccination in Children with Autism and School-matched Controls: A Population-Based Study in Metropolitan Atlanta F.
1 GENETIC POLYMORPHISMS FROM CHRONIC OBSTRUCTIVE PULMONARY DISEASE GENOME-WIDE ASSOCIATION STUDIES IN ALPHA-1 ANTITRYPSIN DEFICIENCY H Khiroya, PR Newby,
ERS SILVER sponsorship
ASSOCIATIONS BETWEEN ANXA11 RS C/T, BTNL2 RS G/A, HLA CLASS I AND II POLYMORPHISMS AND SARCOIDOSIS EVOLUTION Manuel Vaz1, Bruno Lima2, Natália.
Regulatory perspective
Selection of candidate genes Hypothesis and objective
“LOSS OF FUNCTION” POLYMORPHISMS OF THE P2RX7 GENE AND PERIPROSTHETIC OSTEOLYSIS AFTER TOTAL HIP ARTHROPLASTY: A PILOT STUDY. Petřek M1, Mrázek F1 ,
Table 2 Rs number, gene, OR, 95% CI, and permutation p value for the statistical significant variants resulted from allelic association analysis association.
Mu-Kuan Chen1,2, Chiao-Wen Lin3, Shun-Fa Yang1
Significance of the principal genetic variants associated with familial pulmonary fibrosis by their strength and frequency. Significance of the principal.
Association of Pyrin mutations and Autoinflammation with Complex Phenotype Hidradenitis Suppurativa: A Case Control Study S. Vural,1,2 M. Gündoğdu,1 E.
Presentation transcript:

FUNCTIONAL VARIANT OF THE ANXA11 GENE: TRUE MARKER OF PROTECTION AND CANDIDATE DISEASE MODIFIER IN SARCOIDOSIS Stahelova A 1, Mrazek F 1, Kriegova E 1, Hutyrova B 2, Kubistova Z 1, Kolek V 2, Petrek M 1 1 Laboratory of Immunogenomics and Proteomics, Dept of Immunology & 2 Dept. of Respiratory Medicine; Medical Faculty of Palacky University and University Hospital, Olomouc, Czech Republic. Grant support: MSM and PU project SV LF_2010_008 Patients and Methods 1)The study population Czech patients with sarcoidosis: N = 245 The diagnosis of sarcoidosis was established according to international recommendations ("ATS / ERS / WASOG statement on sarcoidosis"). Subgroups defined according to the chest X-ray (CXR) stage (I-IV) of pulmonary sarcoidosis and the presence/absence of Löfgren´s syndrome. Healthy control subjects (control population): N = 254 All individuals included in the study were unrelated of Czech nationality. 2)Genetic analysis Genotyping for ANXA11 rs C / T (R230C) polymorphism was made using qRT-PCR with "TaqMan" probes (Fig. 1) 3)Statistical analysis Consistency of distribution of ANXA11 genotypes with Hardy-Weinberg expectation was verified by the "χ2 goodness-of-fit" test, comparisons of the frequencies of ANXA11 variants in the studied groups was performed by χ2 test. The frequency of ANXA11 rs *T allele was significantly lower in patients with sarcoidosis (35%) compared with the control group (42%, p = 0.04, OR = 0.77, Fig. 2). "Protective" effect of ANXA11*T allele was related to the number of its copies in the genotype (gene-dose effect, Fig. 3). In the subanalysis, ANXA11*T allele was less numerous in patients with affection of the lung parenchyma (CXR stages II-IV) compared to patients with isolated hilar lymphadenopathy (CXR stage I, p = 0.01, Fig. 4). "Protective" effect of ANXA11*T allele was also apparent in the subanalysis by Löfgren´s syndrome (LS): TT homozygotes were more frequent among the patients with LS (21%) compared to patients without LS (7%, p = 0.02, OR = 0.31, 95% CI = ). Introduction Results The genome-wide association study (GWAS) in the German population has recently revealed an association of variants in the ANXA11 (Annexin A11) gene with susceptibility to sarcoidosis (1) The aim of this work was to replicate the association of ANXA11 functional variant rs with sarcoidosis in Czechs. We wondered also whether this ANXA11 variant might be related to the clinical manifestation of sarcoidosis. (1) S. Hofmann et al., Nature Genetics 40, , Sarcoidosis is a systemic granulomatous disease with unknown etiology. Sarcoidosis most commonly affects the lungs. Pulmonary disease is classified according to the chest X-ray findings. Löfgren´s syndrome (LS) is an acute form of sarcoidosis with favourable prognosis in most cases. Epidemiological studies and direct evidence from recent reports strongly support the genetic component of the disease. Conclusion Our data confirmed the findings from the whole-genome study in the German population that ANXA11 rs *T allele reduces the risk of sarcoidosis. Protective effect of this ANXA11 variant was characterised by the „gene-dose effect". Based on our subanalysis we also conclude that ANXA11 rs *T variant may protect from more severe manifestations of sarcoidosis. The mechanism by which ANXA11 and its gene variants implicate in the pathogenesis of sarcoidosis, will undoubtedly be in the scope of further research. Rationale and Aim